Cla97C01G008780.1 (mRNA) Watermelon (97103) v2.5

Overview


Name	Cla97C01G008780.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr01: 9483426 .. 9486203 (+)
Sequence length	318
RNA-Seq Expression	Cla97C01G008780.1
Synteny	Cla97C01G008780.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGATAATAACCTAAACACGACATGTATTCATGATGTCTATCTTCTAAAGAGAGCAACATCTATGGTCGACACTATCCATTCTCAAGAACTAAGCGTGAAAAAATGAAGTATAGCCCAAAAATTATTTTTAATATATATTCATAAACCTTCTTTGATTTATAAAGTGTAAACTAAAACTATGGAACTGAAAAAAGAAAAACAAATAAAGTTGCATATTCCTTAAGTATCTAATTTGGTTTTATGAATTTGGTACACCCACTAAGAATATTATCTTGTTTTTCATTCTCCATTATCATCACCTTTTTCTCAATCCTCCTCATCCAATTCTTCTTTAACAACATCAAAACATAAACTCAAGATAAAAATCACTTAAAAAGGGTATAATTTTTAAAGCCATTTACCTAATTATGCTTCGCTTTGCACATAGTTTGTTGCATAGTGAAAGGTCTTTTCAATTTCAAATTCTGGTTCCAAATAGTTTATATTAAAGTCCCTACAAGTACTTATGGTTTGCTTTTCTTTCTCTTTACTCTCATCCTCTTATTCCTTATGATTATGTTGATCAACTAATATGATTGAGTTTTTAATTAATCTAGTTTAATCTTTTTTATATTAGTTGATCAAAGTAATTGACAAATAGTCTATGTTAAATACGATAAATTATAGTAAAATTTTCATTACAATAGTTGTTGGGATTGGAGGTTGAATCTTCAATTTTAAGGGAGAGATTGCCTGCATTGGTCGATTTAGAATTTCATATCATGTACAGATTTTAGTTCATTAACTTCAATATTTTTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATTTTTATATAGAAAAATATAAAACTAAAAAATCATCAAAAACATATTTTGAATTTTTAAAAACAAACAACAAAAAGTAATGTCAAATATGTTTTTTATTTTTTGTTTTTTAAAAGTAGGAAACCAAAAATAGTTATCAAAGGAGACTAAAATATCTAACAATCTCTTAACTTATGTCTAAAAAAATTTTGAACTTTAAACAGTGTTTAATAAATATTTAAACTTTCAATTTTACATATGAACATGTCTAAACCTTAAAAATATCTAATATATGTTATTGAATTTTTAATTTTGCCCCTAATACGTTTCTAGGCATATTTGAAATTATTTAAAAACCAGCCGATATATTAGATATAAATTGAAATTTATGTCTAATAAAACTTTAAACTTTCAATTTAATTTTCTACTAGCCTCCAAAATTTGAAAAAATGTTGACACAAAACTAAAAATCTAGAAATTATTAGTTCTTGTATTGAAAGTTGTAAAATATATTCGACACCTTAAAATAACTAAATAGACACAAAATTTAAAGTTTGGTTTTTTTAGAGTGGGTAGAGAGTACATATAAACAAGAGAATTTGACAAATACTACTTGTGAAATCAATATCAACAATATTTTTTATCATTTAATTTTTTGAGTTGTTTTCAAATATAGCAAAATTTCACAAAATTTCACAACCAAAATTTCACAAAATTTCACAATAATAGTAACACACAATTTCAAGGTAGATCTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAAATTACATTACCCTTTGAAGCAAAATGAAATCGAAAAGAGAAAGTGTGCATCGGCAGCAGAGGAGGGTAGTCCAGCGTCGTCGTCCGTCTGTTTGTAGTATTGCAGGTGGCGTCTTTGTCGTCCATCGTCGTTCGTCAGCGTTCGTCCATAAGCGTTTGTCTGTCCGTCCGTGCTGAATCAGATCTGGCCATCCATCAGCGTCAGCTCGATCTGGCCGTTCGTTTGTTAGCGTCAGCTTCAAATCTGGCCGGTGACGTCGTCCTTCTTCCATTCAGATGTGGCCAATGGGGGTGGAGAAGAGAAGAGAAGCACGCGGCGGTTAGGGCAAGTGAGAAGAAATTGGGAGAAATGAGGAGAGAAATGAGGGGTTTTAAAATGCCCTCTCCCGACGGTACTTAAAATACCTTTGGGAGAGGGTGTTTTAAACACCCCTCATCCGTCAGGAGATAACTTTGAAAAAAATTTCTCCTCTTCTTTTACATCCTGACAGTAGCGCTCGACGTTAGGAGAACTACTCTCTCCCAACGCTAACTAAATGTCGTCGTGAAAGGTATACTTGACTTGACGAAAAAAAAATGGTCGGCATAGCTACTTTTTCTTGACGCCTAAAAAACCGTTGGAAAAAGTTTTGCCAGGAAAAACAAAATTTCTTGTAGTGAAAATGAATCAACTTATTTACTAATATAGTAAAATGGATACTAATAAATGTCTATTCGTATTTATTACTGTCTATCACTGATAGACAATGACATTTTACTATATTATAAATATTTCCAACTATTTTGCTATTGAAAACTTTTTATTCGACATATTATTTTTTTTGGCCTATTAAGCTAGATACCTACTTTCTACTTGCCACGTGAACTTTTTGACTTTTTTTTTTCTTTCTTTCATTTTCCATCATTTTCTCTTTACAATTTTAGTCTTTTGATTCCATTTCATTCACTTTGGATCTTATGACCAACCCAAATTCCCTTAAGATCAAATTCCAACATTTAGGAATTTTAAACAATAAAAAAAGTGTAAATCATGTGTCCTAACTCCTAAATCATATTTTATGTTCTAGTTAGAACATTTGTATAATTTCACTAAAATTTTATTTCTTTTCAGTTTTGA

mRNA sequence

ATGGTAGATAATAACCTAAACACGACATGTATTCATGATGTCTATCTTCTAAAGAGAGCAACATCTATGGTCGACACTATCCATTCTCAAGAACTAAGCGTGGCGTCTTTGTCGTCCATCGTCGTTCGTCAGCGTTCGTCCATAAGCGTTTGTCTGTCCGTCCGTGCTGAATCAGATCTGGCCATCCATCAGCGTCAGCTCGATCTGGCCGTTCGTTTGTTAGCGTCAGCTTCAAATCTGGCCGGTGACGTCGTCCTTCTTCCATTCAGATGTGGCCAATGGGGGTGGAGAAGAGAAGAGAAGCACGCGGCGTTTTGA

Coding sequence (CDS)

ATGGTAGATAATAACCTAAACACGACATGTATTCATGATGTCTATCTTCTAAAGAGAGCAACATCTATGGTCGACACTATCCATTCTCAAGAACTAAGCGTGGCGTCTTTGTCGTCCATCGTCGTTCGTCAGCGTTCGTCCATAAGCGTTTGTCTGTCCGTCCGTGCTGAATCAGATCTGGCCATCCATCAGCGTCAGCTCGATCTGGCCGTTCGTTTGTTAGCGTCAGCTTCAAATCTGGCCGGTGACGTCGTCCTTCTTCCATTCAGATGTGGCCAATGGGGGTGGAGAAGAGAAGAGAAGCACGCGGCGTTTTGA

Protein sequence

MVDNNLNTTCIHDVYLLKRATSMVDTIHSQELSVASLSSIVVRQRSSISVCLSVRAESDLAIHQRQLDLAVRLLASASNLAGDVVLLPFRCGQWGWRREEKHAAF

Homology

The following BLAST results are available for this feature:

BLAST of Cla97C01G008780.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G008780.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G008780.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cla97C01G008780.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla97C01G008780	Cla97C01G008780	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C01G008780.1-exon	Cla97C01G008780.1-exon-Cla97Chr01:9483426..9483524	exon
Cla97C01G008780.1-exon	Cla97C01G008780.1-exon-Cla97Chr01:9485193..9485405	exon
Cla97C01G008780.1-exon	Cla97C01G008780.1-exon-Cla97Chr01:9486198..9486203	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla97C01G008780.1-cds	Cla97C01G008780.1-cds-Cla97Chr01:9483426..9483524	CDS
Cla97C01G008780.1-cds	Cla97C01G008780.1-cds-Cla97Chr01:9485193..9485405	CDS
Cla97C01G008780.1-cds	Cla97C01G008780.1-cds-Cla97Chr01:9486198..9486203	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla97C01G008780.1	Cla97C01G008780.1-protein	polypeptide