Cla97C01G008780.1 (mRNA) Watermelon (97103) v2.5

Overview
NameCla97C01G008780.1
TypemRNA
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr01: 9483426 .. 9486203 (+)
Sequence length318
RNA-Seq ExpressionCla97C01G008780.1
SyntenyCla97C01G008780.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGATAATAACCTAAACACGACATGTATTCATGATGTCTATCTTCTAAAGAGAGCAACATCTATGGTCGACACTATCCATTCTCAAGAACTAAGCGTGAAAAAATGAAGTATAGCCCAAAAATTATTTTTAATATATATTCATAAACCTTCTTTGATTTATAAAGTGTAAACTAAAACTATGGAACTGAAAAAAGAAAAACAAATAAAGTTGCATATTCCTTAAGTATCTAATTTGGTTTTATGAATTTGGTACACCCACTAAGAATATTATCTTGTTTTTCATTCTCCATTATCATCACCTTTTTCTCAATCCTCCTCATCCAATTCTTCTTTAACAACATCAAAACATAAACTCAAGATAAAAATCACTTAAAAAGGGTATAATTTTTAAAGCCATTTACCTAATTATGCTTCGCTTTGCACATAGTTTGTTGCATAGTGAAAGGTCTTTTCAATTTCAAATTCTGGTTCCAAATAGTTTATATTAAAGTCCCTACAAGTACTTATGGTTTGCTTTTCTTTCTCTTTACTCTCATCCTCTTATTCCTTATGATTATGTTGATCAACTAATATGATTGAGTTTTTAATTAATCTAGTTTAATCTTTTTTATATTAGTTGATCAAAGTAATTGACAAATAGTCTATGTTAAATACGATAAATTATAGTAAAATTTTCATTACAATAGTTGTTGGGATTGGAGGTTGAATCTTCAATTTTAAGGGAGAGATTGCCTGCATTGGTCGATTTAGAATTTCATATCATGTACAGATTTTAGTTCATTAACTTCAATATTTTTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATTTTTATATAGAAAAATATAAAACTAAAAAATCATCAAAAACATATTTTGAATTTTTAAAAACAAACAACAAAAAGTAATGTCAAATATGTTTTTTATTTTTTGTTTTTTAAAAGTAGGAAACCAAAAATAGTTATCAAAGGAGACTAAAATATCTAACAATCTCTTAACTTATGTCTAAAAAAATTTTGAACTTTAAACAGTGTTTAATAAATATTTAAACTTTCAATTTTACATATGAACATGTCTAAACCTTAAAAATATCTAATATATGTTATTGAATTTTTAATTTTGCCCCTAATACGTTTCTAGGCATATTTGAAATTATTTAAAAACCAGCCGATATATTAGATATAAATTGAAATTTATGTCTAATAAAACTTTAAACTTTCAATTTAATTTTCTACTAGCCTCCAAAATTTGAAAAAATGTTGACACAAAACTAAAAATCTAGAAATTATTAGTTCTTGTATTGAAAGTTGTAAAATATATTCGACACCTTAAAATAACTAAATAGACACAAAATTTAAAGTTTGGTTTTTTTAGAGTGGGTAGAGAGTACATATAAACAAGAGAATTTGACAAATACTACTTGTGAAATCAATATCAACAATATTTTTTATCATTTAATTTTTTGAGTTGTTTTCAAATATAGCAAAATTTCACAAAATTTCACAACCAAAATTTCACAAAATTTCACAATAATAGTAACACACAATTTCAAGGTAGATCTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAAATTACATTACCCTTTGAAGCAAAATGAAATCGAAAAGAGAAAGTGTGCATCGGCAGCAGAGGAGGGTAGTCCAGCGTCGTCGTCCGTCTGTTTGTAGTATTGCAGGTGGCGTCTTTGTCGTCCATCGTCGTTCGTCAGCGTTCGTCCATAAGCGTTTGTCTGTCCGTCCGTGCTGAATCAGATCTGGCCATCCATCAGCGTCAGCTCGATCTGGCCGTTCGTTTGTTAGCGTCAGCTTCAAATCTGGCCGGTGACGTCGTCCTTCTTCCATTCAGATGTGGCCAATGGGGGTGGAGAAGAGAAGAGAAGCACGCGGCGGTTAGGGCAAGTGAGAAGAAATTGGGAGAAATGAGGAGAGAAATGAGGGGTTTTAAAATGCCCTCTCCCGACGGTACTTAAAATACCTTTGGGAGAGGGTGTTTTAAACACCCCTCATCCGTCAGGAGATAACTTTGAAAAAAATTTCTCCTCTTCTTTTACATCCTGACAGTAGCGCTCGACGTTAGGAGAACTACTCTCTCCCAACGCTAACTAAATGTCGTCGTGAAAGGTATACTTGACTTGACGAAAAAAAAATGGTCGGCATAGCTACTTTTTCTTGACGCCTAAAAAACCGTTGGAAAAAGTTTTGCCAGGAAAAACAAAATTTCTTGTAGTGAAAATGAATCAACTTATTTACTAATATAGTAAAATGGATACTAATAAATGTCTATTCGTATTTATTACTGTCTATCACTGATAGACAATGACATTTTACTATATTATAAATATTTCCAACTATTTTGCTATTGAAAACTTTTTATTCGACATATTATTTTTTTTGGCCTATTAAGCTAGATACCTACTTTCTACTTGCCACGTGAACTTTTTGACTTTTTTTTTTCTTTCTTTCATTTTCCATCATTTTCTCTTTACAATTTTAGTCTTTTGATTCCATTTCATTCACTTTGGATCTTATGACCAACCCAAATTCCCTTAAGATCAAATTCCAACATTTAGGAATTTTAAACAATAAAAAAAGTGTAAATCATGTGTCCTAACTCCTAAATCATATTTTATGTTCTAGTTAGAACATTTGTATAATTTCACTAAAATTTTATTTCTTTTCAGTTTTGA

mRNA sequence

ATGGTAGATAATAACCTAAACACGACATGTATTCATGATGTCTATCTTCTAAAGAGAGCAACATCTATGGTCGACACTATCCATTCTCAAGAACTAAGCGTGGCGTCTTTGTCGTCCATCGTCGTTCGTCAGCGTTCGTCCATAAGCGTTTGTCTGTCCGTCCGTGCTGAATCAGATCTGGCCATCCATCAGCGTCAGCTCGATCTGGCCGTTCGTTTGTTAGCGTCAGCTTCAAATCTGGCCGGTGACGTCGTCCTTCTTCCATTCAGATGTGGCCAATGGGGGTGGAGAAGAGAAGAGAAGCACGCGGCGTTTTGA

Coding sequence (CDS)

ATGGTAGATAATAACCTAAACACGACATGTATTCATGATGTCTATCTTCTAAAGAGAGCAACATCTATGGTCGACACTATCCATTCTCAAGAACTAAGCGTGGCGTCTTTGTCGTCCATCGTCGTTCGTCAGCGTTCGTCCATAAGCGTTTGTCTGTCCGTCCGTGCTGAATCAGATCTGGCCATCCATCAGCGTCAGCTCGATCTGGCCGTTCGTTTGTTAGCGTCAGCTTCAAATCTGGCCGGTGACGTCGTCCTTCTTCCATTCAGATGTGGCCAATGGGGGTGGAGAAGAGAAGAGAAGCACGCGGCGTTTTGA

Protein sequence

MVDNNLNTTCIHDVYLLKRATSMVDTIHSQELSVASLSSIVVRQRSSISVCLSVRAESDLAIHQRQLDLAVRLLASASNLAGDVVLLPFRCGQWGWRREEKHAAF
Homology
The following BLAST results are available for this feature:
BLAST of Cla97C01G008780.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G008780.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G008780.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C01G008780.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C01G008780Cla97C01G008780gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G008780.1-exonCla97C01G008780.1-exon-Cla97Chr01:9483426..9483524exon
Cla97C01G008780.1-exonCla97C01G008780.1-exon-Cla97Chr01:9485193..9485405exon
Cla97C01G008780.1-exonCla97C01G008780.1-exon-Cla97Chr01:9486198..9486203exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C01G008780.1-cdsCla97C01G008780.1-cds-Cla97Chr01:9483426..9483524CDS
Cla97C01G008780.1-cdsCla97C01G008780.1-cds-Cla97Chr01:9485193..9485405CDS
Cla97C01G008780.1-cdsCla97C01G008780.1-cds-Cla97Chr01:9486198..9486203CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C01G008780.1Cla97C01G008780.1-proteinpolypeptide