Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCTACATCTAGTAAGTTTGTAGCCACCAAAGTAAGCAAGAATGCAATACCACGAATCCTAAAATGGACCGTCAAGTTCCATCCTTTAAGTTGTTGGATAGGAATTTATTCCAACTGAAAAAGGTAATGAATCGTTTAGAGTTACCTATACGATCGTTTAGATTAACCTACACAATTGTTGAGAGTCATCTTCACGATTGTTTAGAGTAATCTACATGATCGCCTAGTTAATAGTAAGCAATCGTTTAGATTTAAACGATCACCTAGTTTCTCTAAATGATCATGTAGTAAAATCTAAACGATTACCTACTCAAGATAAGTGATCGTTTATAGTAATCTAAGCGATCACTTAGTTAAGAATAATAGATTGTTTAGAATAATCTACACGATCGCTTAGTAGTCGGTTGTTTTCAATATGTATTGACTTGTTCTCACCGTTTACATTACAAACAATTATTATGGTGAGACCTATGTCTACACTAGAGGAAATAAAGTACAAGGAGGATAGAATAAGAAGGATTGAGTTGATGCTAGGTGTCAACACCACATTAAGAGATCAGCCTTAAGTTGACACTGAGACCAAACATCACGAGTCCTCTCACAAAGAACAAGTCGAGCAGCCTATGACAAAGCATCATATTAATGACAGTGAACCCCATCGGGCACACGAAGAACAAGTGAACACCCTACCACTGAGACAGAAACATGCATACCGGGTTTGACTAGTGGTCAAAGGGGTAAAAAAGGTGCGCTAAGTCTTCAAAGAAGCACTCAGGCCAAGTCCTCGAGAAGGCACAAGCACTCAAAGTCTTATAAGGTGCTGAGAGAGGAAATATTTGAAGTTCGTAAGGTTTTGGTGAACTTGAAGACGACGATTCGTTAGCAGCACGAACAATTAAGACAACAAATAGAGGATGTGAAGCTGTTTCTTCAGAATTTATGTCAAGTTAGAAATCTTATTCATCCTATGGTTTAGAAGTTCTATGCGATCGTTTAGAATTTCGATGCAATCGTTTAAAATTTCTATACAATCGTTTAGGATATTTATGCGATTTCTTAGGATTTTTTATGTGATGGATTAGGAATGGCTATGTGATCGCATAGTGTGCGATCGTTTAGTAATGTCTATGCGATCGTTTAGATTTCCTATGCGATCGCTTAGGATTTTCTATACGATCTTTTAGGAATTTTTATGCAATTGTTAGATTTCCTACGCAATCGTTAATTACTTTCAATGCAATCATTTATCTAATACTTTATGTTCCTTTGTCTGATTCAGGATAGCAACAAAGAAGATAATCAGAGAAGTATCCCTGATGACGGCTCTGATGTCGATAAAACGGGTAAGCATGGGGAACATGAAGGGGGTGGTGGGGATGGTCAGATTGAGATGAATGAAGGGAATGGTAAAAGGCGGTCTGAGATGAATCCTATCGAAGGGAACCAGGATGATGGGGAGGAACTGGCAATGGTGGTTGTTAACCAAATTGTCGAGCAAAACACGGATAAGCAGCCAGCCGAACTTCAAATAACCGTGCACCCTGGGGAAGAAACCATAGGGGAGACAAGCATGGTTGAACCCATCACCACACAGCCACCACTACCCTGTATAAGAAGTCCCACAATTGAACCCCTCACCACACATCTGCTACCCTCTATACAAGAAATCCTCACACTTGAACCACTCACCACAGAACCACCACCCCTGTTGAAGAGCTCCCCCCATACAAGTGCTCCCCACTCAACCGTTCAATATGTGGAGCCTTTTGGACTTGAATGTGACAATCGAACCACAAGAACAGGCTGA mRNA sequence ATGTCTACATCTAGTAAGTTTGTAGCCACCAAAAGAAGTATCCCTGATGACGGCTCTGATGTCGATAAAACGGGTAAGCATGGGGAACATGAAGGGGGTGGTGGGGATGGTCAGATTGAGATGAATGAAGGGAATGGTAAAAGGCGGTCTGAGATGAATCCTATCGAAGGGAACCAGGATGATGGGGAGGAACTGGCAATGGTGGTTGTTAACCAAATTGTCGAGCAAAACACGGATAAGCAGCCAGCCGAACTTCAAATAACCGTGCACCCTGGGGAAGAAACCATAGGGGAGACAAGCATGGTTGAACCCATCACCACACAGCCACCACTACCCTGTATAAGAAGTCCCACAATTGAACCCCTCACCACACATCTGCTACCCTCTATACAAGAAATCCTCACACTTGAACCACTCACCACAGAACCACCACCCCTGTTGAAGAGCTCCCCCCATACAAGTGCTCCCCACTCAACCGTTCAATATGTGGAGCCTTTTGGACTTGAATGTGACAATCGAACCACAAGAACAGGCTGA Coding sequence (CDS) ATGTCTACATCTAGTAAGTTTGTAGCCACCAAAAGAAGTATCCCTGATGACGGCTCTGATGTCGATAAAACGGGTAAGCATGGGGAACATGAAGGGGGTGGTGGGGATGGTCAGATTGAGATGAATGAAGGGAATGGTAAAAGGCGGTCTGAGATGAATCCTATCGAAGGGAACCAGGATGATGGGGAGGAACTGGCAATGGTGGTTGTTAACCAAATTGTCGAGCAAAACACGGATAAGCAGCCAGCCGAACTTCAAATAACCGTGCACCCTGGGGAAGAAACCATAGGGGAGACAAGCATGGTTGAACCCATCACCACACAGCCACCACTACCCTGTATAAGAAGTCCCACAATTGAACCCCTCACCACACATCTGCTACCCTCTATACAAGAAATCCTCACACTTGAACCACTCACCACAGAACCACCACCCCTGTTGAAGAGCTCCCCCCATACAAGTGCTCCCCACTCAACCGTTCAATATGTGGAGCCTTTTGGACTTGAATGTGACAATCGAACCACAAGAACAGGCTGA Protein sequence MSTSSKFVATKRSIPDDGSDVDKTGKHGEHEGGGGDGQIEMNEGNGKRRSEMNPIEGNQDDGEELAMVVVNQIVEQNTDKQPAELQITVHPGEETIGETSMVEPITTQPPLPCIRSPTIEPLTTHLLPSIQEILTLEPLTTEPPPLLKSSPHTSAPHSTVQYVEPFGLECDNRTTRTG
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..56 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..64 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG08G001980.1-exon | ClCG08G001980.1-exon-CG_Chr08:4121654..4122157 | exon |
| ClCG08G001980.1-exon | ClCG08G001980.1-exon-CG_Chr08:4123430..4123462 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG08G001980.1-cds | ClCG08G001980.1-cds-CG_Chr08:4121654..4122157 | CDS |
| ClCG08G001980.1-cds | ClCG08G001980.1-cds-CG_Chr08:4123430..4123462 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| ClCG08G001980.1 | ClCG08G001980.1-protein | polypeptide |
|
