ClCG04G005215.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG04G005215.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	TTF-type domain-containing protein
Location	CG_Chr04: 18890412 .. 18894838 (-)
Sequence length	1017
RNA-Seq Expression	ClCG04G005215.1
Synteny	ClCG04G005215.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGTATGAATGATAAAAATGTAATTTAATGTGGTCTAAGTGCAAGCATATATTGTCAATGAGTAATAACTTGAACATATTCAATGTAACGATTAAGATTTGATTGATTTGGGGTAACGAGTAAAAACACTAAACAATGGTTGATAAACAGGGATTACAATCTAGTTTTAACCAAAAGGGACTTATATCTTAGGCTATGCGACTTCATCATGTCAATAGTGACTTAACAAAAACTTCTCATATTCAATCTTGTGCATCAATGGATCTACGTAGGGGCTAGGGGACATGCCCCCTTCAAATTGTTGGTTTTTGAATTTTTAATATAAGTTTTTAGTAGTATTTAATAATATATATAAATAAGGTCAATATGTTTATCAAAAAGGTTTGCCAGAGCGATGATAGGGGGTTCACTCTGGGATTTGCGCGCCACCCAGGTTTGAATATTATGTTTTACAACTTGAAACATATTTTGTATATTAAGTTCAGAGTTAAAACTTCAAGATAATTTTTTCATCTATCGTCAGAATATACGTTCTATACTGTTCACAAGTAAGTCTTAAAATTTTATTTATTTATTTATTTATTTATAGTTTGCATACTTTTAAATCTATGTTATAATTCCTATTACTTTTATTATTAATACTTATGTAGAGTTAACTCTATATTCTAATTGGTTAGAATATAGCATTTTAAAGGATGATGCATTTTGCTTATGTTGTTACATGTTCAAACCAGAAGTAGGTGAACAATCAGGAAGTGAATGTTTTGTTAGTGAAGGATTTTCTAATTGGAAGAAAAAAGAGATATTGAATAGTCATGTTGGTGGTCCTAATAGTACACACAATCAAGCTTGGGGTAAATGTGAGGTTTTTTGAAAAAAAAGCAACATCTTGAGACTTTTTAAAATATGATGTCTGACCAAGCACGAGTTGAGTACGAATTCGATTAGGTGCATCAATTGATTGTACTCGATTTTTATTATAGCAAGGGCTTGCATTTCGTGGACATGACGAAATTGATGATTCAAAGAATCAAGATAATTTTCTTAAATTGTTACGATGGTTGTGCAACCACAACAAAGATATTGGAGTAGTGACTTTGAAAAATGCTCTGAATACTTTGAAATTGATTGCACCTGATATTCAAAAAGATATAGTGAACTCTATTGCAGTAGAAATTGTTAATATAGTTATAAGAGATATGAGTGATAAACAATTTTCTATCTTGATAGACGAATCAAGAGATATATCTTCAAAGGAGCAAATGTCAATTGTATTACGATATGTGGATAAAGATCATGTGGTTGAACAATTTGTTGGAATCATACATGTCAATAATACAAGTGCTCTATCACTTAAGTATTGCTAGTTTGAGAGGCTAAGGATATGATGAAGCAAATAATATGTAAGGTGAATTTAATGGCTTGAAAGCACTTATTCTGAAAGAAAATGAATGTGTTTTTTACATTCATTATTTTTCACATCACCTTCAATTAGCTCTCATAGCTATTGAAAAAAATCATGTTGAAATTGCTGGTCTTTTTTTAATTGTTACAAATGTGGTGAATGTTATTGGAGCATCAGCAAAACATCGAGATATTCTACGAGAGAAACATAGCATGAAAATTTTTGAAGCTTTAAATAATGGTGAAATATCAAGTGGTCGAAGATTAAATCAAAAGACAATGATTCAAACAACCGGAAGATACTCGATGAGGATCACATCACAATACTCTAACGAATTTTATTACAATGTTCTCTTTAGTAGTTGATGTACTTGAGACAATTGTGCAAGGTGGATCTGTTGGATTTGTACTTGTAATTGATTAGTTAATTATTTTTATTATTAATTATGCACTATTAATTTATCCATTAACGAAAAAATCCAAGGTTATTGCATGAAGTCTTGAACATGTATGTAGTTGATATACAGGTGGATCATGTACAAGAAATTACTTAAAGGTCTATAGTATATGGATAAGGTTGTGTGTCTTATCTTGGTGACACTATAGACACAACCCACTTTGTAATAGTTATAAATGGTTTGATCCAAACTGTTCATGTGGAGACATGTAAGTGGGGGTATTCTATACAAAGAGTTCGTATAAGACTAGATCGTGAAATATTTAATCTCTCTTTGTAAATCCGTTAATTAATGAGATTAATATTTCATAGGATGATCATGTGCGACTTGATCTTAATCCTAAGTGACTTATGAACTCATATTCATGATATCGATCCTTTGATTTGCATGGGTGAGAGTGACCTGAGTTGTTGACCCAATAAGCTTACCATTTTGGGGATTTGACTAAATGGGGAGCTGGGAACATAACTTCACAAGATAGAATTCACTCCTTCCCAGATAGGGTAAGTAGATGAGTAGTTCCCTTAAGTGCTGATTTCGGGTCTTGAACATGGGGCGCCACCCTCTCACTGGCTCGAAGGGATTTAGTTTATGGTTGGGCCATGAACAAATTATTCATTAGAGAGATCAGTGGTACTTAAGAAAAAATAGGTAATTACAGGGGTAAAACAGACATTTGACCAAGCTGTAATTATGAACAACTTGTGAAGGATTGACTTGCCTAAATTGATTATATCCATGGACACGACTTGTCCTACAGTGCATAAGAGTTCAATTATGAGTCTATAGTGGTTTGCCTTGTAGTTAATGAATGAAGATTAATTTAATTAAAGAGTTTAATTAATTAATCTTGGAGCATTGGAGTTTATAATTTGTAGGTCCATAAAGTCCCCTTGTTAGCTCACCACGGACCAATCAAATATGTTGAAAGAAAAATTTGAAATGTTCAAATTTATGAGAAAAAATATTAATTGCATTGGATACAATAAATTACATGATTTATTATAAAGTTTATTTGAATAAGATTTCAATTATAATTTTGTAATATGGATAATTAATTTATTTGAATATAATTAAAATAATCAATTATTTATTTGGATGAAGTCCATATAAATAAATAGAGGATTAATTAATTAATTAATTTGAATTCGATTCAAATAATTAATTATTTAATTTGGATGAGATACAAATTAAAGATTCTGTAGAAAATAAATATTTAAATAAGGTTTAAATAATTTAAACCACTTAATATGAGATATTATTTGGATAGATATTTATTAATATTGAATATTATTAAATATTTAATTTAAAATATCTGTAAAAGGGTTATTCTAGTAGGATTAGAAGAAGAGTTTTATAAATAGGGCCCTTGGGAGCCCTCATGGAATACACTCTCTATAAGAATAATCTCTTCGACTACTCTAAATTTTTCCAATTTTCTTAGAATGGTTCTAAGAAAATTCAAGAAGCGGTTCTCACAAACCGGATCTTTTGGAAAAGGAAGACTACACGGAGAAGACTATCAGTTGGAAAAGAATGACTATAAGGAGAAGACTATTAGTTAAAGGAGAAGATTTTGCTGAAATTATAGATCAACAAAGATATGTTGCTCAACCTTTTCTTAACTTTTTGTATTTTTAATTCTTTCAAAAAAGCAAAGAACGCGATCACATGCTTCCGCCGGAATTAAATTCCCTTCAGGATCAACTCCAACACAAAAATATGAAGCGAAGATTCTAATAAATTCGATCTTGTCATTTGACTTTGTTTTCAATATACATTTTATGAAAATTATCTTAGGAATCACAAATGAACTGTCTCAAGCATTACAAAGAAAAGACCAAGATATTGTGAATGCAATAAATTTAGTAAGATTTTGTAAAGAAAGATTGCAATTAATAAGAGAGTCTGGTTAGGATTCATTATTGCAAGTGGTTTTTTATTTTTGCAATAGTCATGCTATTTAAGTTCTTAAAATGGATGACATGTTTCTGATTCGAGGACGATAAAGTCGAAGATCTCAACCAATTACAAATTTGCATCATTATCGTGTTGGAATTTTTTATGTTGTCATTGATCTACAACTTCAAGAGTTGAATAATCGTTTTACTGTAACAAGTACTAAATTGCTCCTCTGTGTGGCATGTTTGAATTCGACTAATTCATTTATTCCTTTTGATAGACAAAAACTTATTTGGCTTGGTCAATTTTATCCAAGAGACTTTACTGCTATTGAAATCTCTATGCTTGAGGATCAACTTCAAAATTACATCATTGATATGCATTCAGAGTTTGTTGAACTAAAAAGTATATTTGATCTTGCGGTAAAAATAATCGCGACAAATAAAGATAATGTCTATCCATTAGTTTATCGGTTGCTAACATTGACATTGATTTTACTTGTTGCAACAACTATTGTAGAGAGAACATTTTCTGCTATGAAAATTGTGAAGGCTCGATTGTGTAATCGGATGAGAGATCAATGGATGAATGATTGTCTTATAGCATATATTGAGAAAGATTTATTGGATAAGTTAAATGATAAAGTTATCATTCATTAG

mRNA sequence

ATGTGCAGCGATGATAGGGGGTTCACTCTGGGATTTGCGCGCCACCCAGAGTTAACTCTATATTCTAATTGGTTAGAATATAGCATTTTAAAGGATGATGCATTTTGCTTATGTTGTTACATGTTCAAACCAGAAGTAGGTGAACAATCAGGAAGTGAATGTTTTGTTAGTGAAGGATTTTCTAATTGGAAGAAAAAAGAGATATTGAATAGTCATGTTGGTGGTCCTAATAGTACACACAATCAAGCTTGGGGTAAATGTGAGCAAGGGCTTGCATTTCGTGGACATGACGAAATTGATGATTCAAAGAATCAAGATAATTTTCTTAAATTGTTACGATGGTTGTGCAACCACAACAAAGATATTGGAGTAGTGACTTTGAAAAATGCTCTGAATACTTTGAAATTGATTGCACCTGATATTCAAAAAGATATAGTGAACTCTATTGCAGTAGAAATTGTTAATATAGTTATAAGAGATATGAGTGATAAACAATTTTCTATCTTGATAGACGAATCAAGAGATATATCTTCAAAGGAGCAAATGTCAATTGTATTACGATATGTGGATAAAGATCATGTGGTTGAACAATTTGTTGGAATCATACATGTCAATAATACAAGTGCTCTATCACTTAAACAAAAACTTATTTGGCTTGGTCAATTTTATCCAAGAGACTTTACTGCTATTGAAATCTCTATGCTTGAGGATCAACTTCAAAATTACATCATTGATATGCATTCAGAGTTTGTTGAACTAAAAAGTATATTTGATCTTGCGGTAAAAATAATCGCGACAAATAAAGATAATGTCTATCCATTAGTTTATCGGTTGCTAACATTGACATTGATTTTACTTGTTGCAACAACTATTGTAGAGAGAACATTTTCTGCTATGAAAATTGTGAAGGCTCGATTGTGTAATCGGATGAGAGATCAATGGATGAATGATTGTCTTATAGCATATATTGAGAAAGATTTATTGGATAAGTTAAATGATAAAGTTATCATTCATTAG

Coding sequence (CDS)

ATGTGCAGCGATGATAGGGGGTTCACTCTGGGATTTGCGCGCCACCCAGAGTTAACTCTATATTCTAATTGGTTAGAATATAGCATTTTAAAGGATGATGCATTTTGCTTATGTTGTTACATGTTCAAACCAGAAGTAGGTGAACAATCAGGAAGTGAATGTTTTGTTAGTGAAGGATTTTCTAATTGGAAGAAAAAAGAGATATTGAATAGTCATGTTGGTGGTCCTAATAGTACACACAATCAAGCTTGGGGTAAATGTGAGCAAGGGCTTGCATTTCGTGGACATGACGAAATTGATGATTCAAAGAATCAAGATAATTTTCTTAAATTGTTACGATGGTTGTGCAACCACAACAAAGATATTGGAGTAGTGACTTTGAAAAATGCTCTGAATACTTTGAAATTGATTGCACCTGATATTCAAAAAGATATAGTGAACTCTATTGCAGTAGAAATTGTTAATATAGTTATAAGAGATATGAGTGATAAACAATTTTCTATCTTGATAGACGAATCAAGAGATATATCTTCAAAGGAGCAAATGTCAATTGTATTACGATATGTGGATAAAGATCATGTGGTTGAACAATTTGTTGGAATCATACATGTCAATAATACAAGTGCTCTATCACTTAAACAAAAACTTATTTGGCTTGGTCAATTTTATCCAAGAGACTTTACTGCTATTGAAATCTCTATGCTTGAGGATCAACTTCAAAATTACATCATTGATATGCATTCAGAGTTTGTTGAACTAAAAAGTATATTTGATCTTGCGGTAAAAATAATCGCGACAAATAAAGATAATGTCTATCCATTAGTTTATCGGTTGCTAACATTGACATTGATTTTACTTGTTGCAACAACTATTGTAGAGAGAACATTTTCTGCTATGAAAATTGTGAAGGCTCGATTGTGTAATCGGATGAGAGATCAATGGATGAATGATTGTCTTATAGCATATATTGAGAAAGATTTATTGGATAAGTTAAATGATAAAGTTATCATTCATTAG

Protein sequence

MCSDDRGFTLGFARHPELTLYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTHNQAWGKCEQGLAFRGHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSLKQKLIWLGQFYPRDFTAIEISMLEDQLQNYIIDMHSEFVELKSIFDLAVKIIATNKDNVYPLVYRLLTLTLILLVATTIVERTFSAMKIVKARLCNRMRDQWMNDCLIAYIEKDLLDKLNDKVIIH

Homology

[Close]

BLAST of ClCG04G005215.1 vs. NCBI nr
Match: XP_021828840.1 (uncharacterized protein LOC110769211 isoform X5 [Prunus avium])

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-73
Identity = 165/346 (47.69%), Postives = 217/346 (62.72%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKK-EILNSHVGGPNST 80
           +  WLEYS+ KD A+C CCY+FKP  GEQ+GS+ FV +GFSNWKKK E L  HVGGP S 
Sbjct: 95  FPTWLEYSVAKDAAYCFCCYLFKPNTGEQAGSDSFVGKGFSNWKKKSERLQGHVGGPMSA 154

Query: 81  HNQAWGKCE----------------------------QGLAFRGHDEIDDSKNQDNFLKL 140
           HNQAW  C+                            QGL F G DE +DS NQ  F  L
Sbjct: 155 HNQAWSNCKAFSKQIEAQTEYKTLLGASVSCMRFLLRQGLLFYGDDEYEDSNNQGMFADL 214

Query: 141 LRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILID 200
           LR  CN+++DI  VTL NA  TLKL +PD QKDI  +I++EI++ ++R++ D  FSILID
Sbjct: 215 LRLRCNYDEDIKAVTLNNAPLTLKLTSPDTQKDIEIAISMEIISAIVREIGDSLFSILID 274

Query: 201 ESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSLKQKLIWLGQFYPRDFTAIE 260
           E  D+SS++QM+IVLR+VDK HV+E+++GI+   + +A+S K  +          F+   
Sbjct: 275 EFHDMSSQDQMAIVLRFVDKGHVIERYLGIVQATDDTAVSRKGAI-------DDFFSTHG 334

Query: 261 ISMLEDQLQNYIIDMHSEFVELKSIFDLAVKIIATNKDNVYPLVYRLLTLTLILLVATTI 320
           +SM + + Q Y     S    L  I DLA K++ T KD V+PLVY LLTL LIL VAT  
Sbjct: 335 LSMAKLRGQGY--GGTSNMQGLNGIADLAQKMVETKKDCVFPLVYLLLTLALILPVATPR 394

Query: 321 VERTFSAMKIVKARLCNRMRDQWMNDCLIAYIEKDLLDKLNDKVII 338
           V+R FSAM IVK RL N+M D+ +   LI YIE D+LD ++D+VI+
Sbjct: 395 VDRVFSAMNIVKNRLRNQMEDERIKGRLIPYIETDILDSIDDEVIL 431

[Close]

BLAST of ClCG04G005215.1 vs. NCBI nr
Match: XP_028054201.1 (uncharacterized protein LOC114258446 [Camellia sinensis])

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-72
Identity = 177/389 (45.50%), Postives = 222/389 (57.07%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTH 80
           + NWLEYSI KD AFCLCCY+FKP++G+Q+G + FV EGFSNWKKKE +++HVGGPNS H
Sbjct: 39  FPNWLEYSIAKDAAFCLCCYLFKPDIGDQAGGDSFVGEGFSNWKKKEKIHTHVGGPNSVH 98

Query: 81  NQAWGKCE----QGLAFRGHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKL 140
           +QA  KC+    QGLAFR HDE ++S NQ NFL+LL++L +HN+D+ VV L NA   LKL
Sbjct: 99  SQALSKCQDLLKQGLAFRWHDESENSSNQGNFLELLKFLADHNEDVKVVALSNAPQNLKL 158

Query: 141 IAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVDK-DHVV 200
            +PDIQKDI N  A E +N++IRD+SD  FSILIDE+ DIS K++M++V+RYVDK   V+
Sbjct: 159 TSPDIQKDIANVAAFETINVIIRDLSDALFSILIDEAHDISIKKKMTVVIRYVDKMGQVI 218

Query: 201 EQFVGIIHVNNTSALSLKQKLIWL------------GQFYP------------------- 260
           E+F+GI HV NT+ LSLKQ +  L            GQ Y                    
Sbjct: 219 ERFLGIEHVANTNTLSLKQAVENLFSRLRMSTSRLRGQGYDGASNMQDLALLTVAKNHNQ 278

Query: 261 ---------------------RDFTA---------------------------------- 311
                                RD                                     
Sbjct: 279 IILLFTLVSNVVNVVGPSRKRRDIVREKQVAKVTEALNTRELSSRQGINQETNLKHASDI 338

[Close]

BLAST of ClCG04G005215.1 vs. NCBI nr
Match: XP_021828838.1 (uncharacterized protein LOC110769211 isoform X3 [Prunus avium])

HSP 1 Score: 274.2 bits (700), Expect = 1.5e-69
Identity = 180/500 (36.00%), Postives = 236/500 (47.20%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKK-EILNSHVGGPNST 80
           +  WLEYS+ KD A+C CCY+FKP  GEQ+GS+ FV +GFSNWKKK E L  HVGGP S 
Sbjct: 95  FPTWLEYSVAKDAAYCFCCYLFKPNTGEQAGSDSFVGKGFSNWKKKSERLQGHVGGPMSA 154

Query: 81  HNQAWGKCE----------------------------QGLAFRGHDEIDDSKNQDNFLKL 140
           HNQAW  C+                            QGL F G DE +DS NQ  F  L
Sbjct: 155 HNQAWSNCKAFSKQIEAQTEYKTLLGASVSCMRFLLRQGLLFYGDDEYEDSNNQGMFADL 214

Query: 141 LRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILID 200
           LR  CN+++DI  VTL NA  TLKL +PD QKDI  +I++EI++ ++R++ D  FSILID
Sbjct: 215 LRLRCNYDEDIKAVTLNNAPLTLKLTSPDTQKDIEIAISMEIISAIVREIGDSLFSILID 274

Query: 201 ESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSL------------------- 260
           E  D+SS++QM+IVLR+VDK HV+E+++GI+   + +A+S                    
Sbjct: 275 EFHDMSSQDQMAIVLRFVDKGHVIERYLGIVQATDDTAVSRKGAIDDFFSTHGLSMAKLR 334

Query: 261 ------------------------------------------------------------ 320
                                                                       
Sbjct: 335 GQGYGGTSNMQDGLSQALQKNDQDIVNAMNLVRVCKEQLQVMKESGWDSLLNEVSSFCQK 394

Query: 321 ------------------------------------------------------------ 338
                                                                       
Sbjct: 395 HEIEVHNMDDRFLTRGRKRDQVITNMHYYHVELFCTVIDVQIQELNVRFTEMNTGLLLCV 454

[Close]

BLAST of ClCG04G005215.1 vs. NCBI nr
Match: XP_008245511.1 (PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume])

HSP 1 Score: 260.0 bits (663), Expect = 2.8e-65
Identity = 203/678 (29.94%), Postives = 246/678 (36.28%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTH 80
           +  WLEYSI KD AFCLCCY+FKP+VG QSG E FVS GFSNWKKK+ L  HVGGPNS H
Sbjct: 98  FPTWLEYSIEKDAAFCLCCYLFKPDVGAQSGGESFVSVGFSNWKKKDRLQIHVGGPNSAH 157

Query: 81  NQAWGKCE----------------------------------------QGLAFRGHDEID 140
           N+AW  CE                                        QGL FRGHDE +
Sbjct: 158 NKAWRSCEVLLNQRQHIETILSKHSNQDRIDYRTRLGASVGVSRILLQQGLPFRGHDESE 217

Query: 141 DSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRD 200
           +S NQ NFL  LRWLC  N DI  VTLKNA   +KL +PDIQKDI ++I+ EI+N +IRD
Sbjct: 218 NSTNQGNFLAFLRWLCRFNDDIKAVTLKNAPENMKLTSPDIQKDISSAISTEIINAIIRD 277

Query: 201 MSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSL-------- 260
           + D  F+IL+DES D+SSKE M+IVLRYVDK  V+E+FVGI+HV +T + SL        
Sbjct: 278 IGDSLFAILVDESCDMSSKEHMAIVLRYVDKGKVIERFVGIVHVTDTKSSSLKLAVDDFF 337

Query: 261 ------------------------------------------------------------ 320
                                                                       
Sbjct: 338 SRHGLSISRLRGQGYDGASNMRGEFSGLKTLILNENDSAFYVHCFAHQLQLALVAVAKKH 397

Query: 321 ------------------------------------------------------------ 338
                                                                       
Sbjct: 398 SEIADLFTMVSNVVNVVGASAKRRDMLREKHADVIFEALNNNELLSGQGLNQETNLKRSS 457

[Close]

BLAST of ClCG04G005215.1 vs. NCBI nr
Match: XP_028079852.1 (zinc finger MYM-type protein 1-like [Camellia sinensis])

HSP 1 Score: 257.7 bits (657), Expect = 1.4e-64
Identity = 135/241 (56.02%), Postives = 169/241 (70.12%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTH 80
           + NWLEYS+ KD  FCLCCY+FKP++G+Q+G + FV EGFSNWKKKE + +HV GPNS H
Sbjct: 96  FPNWLEYSVTKDATFCLCCYLFKPDIGDQAGGDSFVGEGFSNWKKKEKIQTHVEGPNSAH 155

Query: 81  NQAWGKCE--QGLAFRGHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIA 140
           NQ   KC+  QGLA RGHD    S NQ NFLKLL++L +HNKD+ VV L NA   LKL  
Sbjct: 156 NQVSSKCQDLQGLALRGHDGSKHSSNQGNFLKLLKFLADHNKDVKVVALSNAPQNLKLTC 215

Query: 141 PDIQKDIVNSIAVEIVNIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVD-KDHVVEQ 200
           PDIQKDIVN  A E +N++IRD+ D  FSILIDE+RDIS KEQM++V+RYVD K  V+E 
Sbjct: 216 PDIQKDIVNVAAFETINVIIRDLGDALFSILIDEARDISIKEQMAVVIRYVDKKGQVIEH 275

Query: 201 FVGIIHVNNTSALSLKQKL--IWLGQFYPRDFTAIEISMLEDQLQNYIIDMHSEFVELKS 257
           F+GI HV NT+ALSLKQ +  ++ G         + IS L  Q  +   +M  EF  LK+
Sbjct: 276 FLGIEHVANTNALSLKQAVENLFSG-------LGLSISRLRGQGYDGASNMQGEFNGLKT 329

[Close]

BLAST of ClCG04G005215.1 vs. ExPASy Swiss-Prot
Match: Q5SVZ6 (Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-08
Identity = 61/230 (26.52%), Postives = 98/230 (42.61%), Query Frame = 0


Query: 31  KDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKK-----------------------E 90
           KD AFC  C +F  +     G E F + G SNWKK                        +
Sbjct: 472 KDVAFCYSCQLFCQKY-FSCGRESFATHGTSNWKKTLEKFRKHEKSEMHLKSLEFWREYQ 531

Query: 91  ILNSHVGGPNSTH------NQAWGKC---------EQGLAFRGHDEIDDSKNQDNFLKLL 150
             +  V    S H      N+ + K          +Q L  RG+D+   S N+ NFL+LL
Sbjct: 532 FCDGAVSDDLSIHSKQIEGNKKYLKLIIENILFLGKQCLPLRGNDQSVSSVNKGNFLELL 591

Query: 151 RWLCNHNKDIGVVTLKNALNTLKLI-APDIQKDIVNSIAVEIVNIVIRDMSDKQ-FSILI 210
                  KD G  T +   + +    +  IQ DI+  I  E++  ++ +++D   FSI+ 
Sbjct: 592 EM---RAKDKGEETFRLMNSQVDFYNSTQIQSDIIEIIKTEMLQDIVNEINDSSAFSIIC 651

Query: 211 DESRDISSKEQMSIVLRYVDKDH----VVEQFVGIIHVNNTSALSLKQKL 217
           DE+ + + KEQ+SI +RY  K      + E+F+G +     +   L + +
Sbjct: 652 DETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTI 697

[Close]

BLAST of ClCG04G005215.1 vs. ExPASy TrEMBL
Match: A0A6P5TP52 (uncharacterized protein LOC110769211 isoform X5 OS=Prunus avium OX=42229 GN=LOC110769211 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 8.1e-74
Identity = 165/346 (47.69%), Postives = 217/346 (62.72%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKK-EILNSHVGGPNST 80
           +  WLEYS+ KD A+C CCY+FKP  GEQ+GS+ FV +GFSNWKKK E L  HVGGP S 
Sbjct: 95  FPTWLEYSVAKDAAYCFCCYLFKPNTGEQAGSDSFVGKGFSNWKKKSERLQGHVGGPMSA 154

Query: 81  HNQAWGKCE----------------------------QGLAFRGHDEIDDSKNQDNFLKL 140
           HNQAW  C+                            QGL F G DE +DS NQ  F  L
Sbjct: 155 HNQAWSNCKAFSKQIEAQTEYKTLLGASVSCMRFLLRQGLLFYGDDEYEDSNNQGMFADL 214

Query: 141 LRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILID 200
           LR  CN+++DI  VTL NA  TLKL +PD QKDI  +I++EI++ ++R++ D  FSILID
Sbjct: 215 LRLRCNYDEDIKAVTLNNAPLTLKLTSPDTQKDIEIAISMEIISAIVREIGDSLFSILID 274

Query: 201 ESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSLKQKLIWLGQFYPRDFTAIE 260
           E  D+SS++QM+IVLR+VDK HV+E+++GI+   + +A+S K  +          F+   
Sbjct: 275 EFHDMSSQDQMAIVLRFVDKGHVIERYLGIVQATDDTAVSRKGAI-------DDFFSTHG 334

Query: 261 ISMLEDQLQNYIIDMHSEFVELKSIFDLAVKIIATNKDNVYPLVYRLLTLTLILLVATTI 320
           +SM + + Q Y     S    L  I DLA K++ T KD V+PLVY LLTL LIL VAT  
Sbjct: 335 LSMAKLRGQGY--GGTSNMQGLNGIADLAQKMVETKKDCVFPLVYLLLTLALILPVATPR 394

Query: 321 VERTFSAMKIVKARLCNRMRDQWMNDCLIAYIEKDLLDKLNDKVII 338
           V+R FSAM IVK RL N+M D+ +   LI YIE D+LD ++D+VI+
Sbjct: 395 VDRVFSAMNIVKNRLRNQMEDERIKGRLIPYIETDILDSIDDEVIL 431

[Close]

BLAST of ClCG04G005215.1 vs. ExPASy TrEMBL
Match: A0A6P5TMI4 (uncharacterized protein LOC110769211 isoform X3 OS=Prunus avium OX=42229 GN=LOC110769211 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 7.1e-70
Identity = 180/500 (36.00%), Postives = 236/500 (47.20%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKK-EILNSHVGGPNST 80
           +  WLEYS+ KD A+C CCY+FKP  GEQ+GS+ FV +GFSNWKKK E L  HVGGP S 
Sbjct: 95  FPTWLEYSVAKDAAYCFCCYLFKPNTGEQAGSDSFVGKGFSNWKKKSERLQGHVGGPMSA 154

Query: 81  HNQAWGKCE----------------------------QGLAFRGHDEIDDSKNQDNFLKL 140
           HNQAW  C+                            QGL F G DE +DS NQ  F  L
Sbjct: 155 HNQAWSNCKAFSKQIEAQTEYKTLLGASVSCMRFLLRQGLLFYGDDEYEDSNNQGMFADL 214

Query: 141 LRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILID 200
           LR  CN+++DI  VTL NA  TLKL +PD QKDI  +I++EI++ ++R++ D  FSILID
Sbjct: 215 LRLRCNYDEDIKAVTLNNAPLTLKLTSPDTQKDIEIAISMEIISAIVREIGDSLFSILID 274

Query: 201 ESRDISSKEQMSIVLRYVDKDHVVEQFVGIIHVNNTSALSL------------------- 260
           E  D+SS++QM+IVLR+VDK HV+E+++GI+   + +A+S                    
Sbjct: 275 EFHDMSSQDQMAIVLRFVDKGHVIERYLGIVQATDDTAVSRKGAIDDFFSTHGLSMAKLR 334

Query: 261 ------------------------------------------------------------ 320
                                                                       
Sbjct: 335 GQGYGGTSNMQDGLSQALQKNDQDIVNAMNLVRVCKEQLQVMKESGWDSLLNEVSSFCQK 394

Query: 321 ------------------------------------------------------------ 338
                                                                       
Sbjct: 395 HEIEVHNMDDRFLTRGRKRDQVITNMHYYHVELFCTVIDVQIQELNVRFTEMNTGLLLCV 454

[Close]

BLAST of ClCG04G005215.1 vs. ExPASy TrEMBL
Match: A0A2N9J031 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62
Identity = 195/599 (32.55%), Postives = 242/599 (40.40%), Query Frame = 0


Query: 23  NWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTHNQ 82
           +WLEYSI KD AFCL CY+FK +VGEQ+G + FV+EGFSNWK  E L  H GG NS+HNQ
Sbjct: 106 DWLEYSIAKDAAFCLYCYLFKRDVGEQAGGDTFVTEGFSNWKCPEKLRIHEGGINSSHNQ 165

Query: 83  AWGKCE----------------------------------------QGLAFRGHDEIDDS 142
           A    E                                        QGLAFRGHDE +DS
Sbjct: 166 ARRMFEDLLKPNQSIQSFHFKQTDQARIEYRTRLNASIDCIRFLLRQGLAFRGHDESEDS 225

Query: 143 KNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRDMS 202
            NQ NFL+LL++L +HN+DI  VTL+NA     +I+P IQKDIV++ AVE  N +I ++ 
Sbjct: 226 SNQGNFLELLKFLADHNEDIKAVTLRNAPENNMMISPAIQKDIVSAAAVETSNAIIMELG 285

Query: 203 DKQFSILIDESRDISSKEQMSIVLRYVD-KDHVVEQFVGIIHVNNTSALSL--------- 262
           D  FS+LIDESRDIS+KEQM++ LRYVD K HVVE+F+GI HV +T+ALSL         
Sbjct: 286 DAFFSVLIDESRDISTKEQMAVALRYVDKKGHVVERFLGIEHVTDTTALSLKAAVEDLFC 345

Query: 263 ------------------------------------------------------------ 322
                                                                       
Sbjct: 346 SCKRLDLLKEKQATRVVESVHTGELPSGQGLNQETSLKRSCDTRWSSHYNTMISLIDMFP 405

Query: 323 ------------------------------------------------------------ 338
                                                                       
Sbjct: 406 SIVDVLDAVAEDGSTSELRGQAEHLSHFIQSFGFVFNLHLMRYILGVSNELSQALQRKDQ 465

[Close]

BLAST of ClCG04G005215.1 vs. ExPASy TrEMBL
Match: A0A5B7AXL6 (Putative zinc finger MYM-type protein 1-like (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030810 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 9.2e-62
Identity = 195/685 (28.47%), Postives = 251/685 (36.64%), Query Frame = 0


Query: 15  HPELTLYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVG 74
           H     Y NWLEYSI KD AFCLCCY+F  ++G+Q+GS+ FVS GF+ W KKE L  HVG
Sbjct: 93  HSWFEKYGNWLEYSIEKDAAFCLCCYLFTSDIGKQAGSDSFVSGGFTAWNKKERLEVHVG 152

Query: 75  GPNSTHNQAWGKCE----------------------------------------QGLAFR 134
           GPNS HNQAW KC+                                        QGL+F 
Sbjct: 153 GPNSAHNQAWNKCQDLMKQKQHIQVALCKQSEQARSEYRTILTASIDCIRFLLRQGLSFH 212

Query: 135 GHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIV 194
           GHDE +DS N+ NFL+LL++L +HN+ I  V L+N L  LK + PDIQKDIVN++A E  
Sbjct: 213 GHDETEDSSNRGNFLELLQFLADHNETISNVVLRNPLKNLKFVTPDIQKDIVNAVANETT 272

Query: 195 NIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVV-EQFVGIIHVNNTSALSL- 254
           N +I D+ D  F+IL+DES D+SSKEQM++VLRYVDK  +V E+F+GI+HV +T+ALS  
Sbjct: 273 NAIIEDLGDDLFAILVDESCDVSSKEQMTVVLRYVDKRGIVLERFLGIVHVIDTTALSRK 332

Query: 255 ------------------------------------------------------------ 314
                                                                       
Sbjct: 333 ATIESLFSKHGLSSSRIRGQSYDGASSMQGEFNGLKTLIMKENESAFYIHCFAHQLQLTL 392

Query: 315 ------------------------------------------------------------ 338
                                                                       
Sbjct: 393 IVVAKNHVDIAWFFNLVSTLLNVVGASCKCRDILQEKQAAKVAEALSNGELQSGRELNQE 452

[Close]

BLAST of ClCG04G005215.1 vs. ExPASy TrEMBL
Match: A0A2N9HSH6 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44919 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.7e-61
Identity = 177/485 (36.49%), Postives = 228/485 (47.01%), Query Frame = 0


Query: 21  YSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNSTH 80
           Y NWLEYSI KD  FCLCCY+F+ +VG+Q+G + FV  GF  W KKE L +HVGG NS H
Sbjct: 12  YKNWLEYSIEKDAVFCLCCYLFRQDVGKQAGGDTFVRTGFKLWHKKEKLQTHVGGVNSAH 71

Query: 81  NQAWGKCE----------------------------------------QGLAFRGHDEID 140
           NQA  KCE                                        QGLAFRGHDE  
Sbjct: 72  NQALKKCEDLMKPNQHINNVFVKQTKEEKIKYRIQLNATVDCIRFLLRQGLAFRGHDESP 131

Query: 141 DSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIRD 200
           DS ++ NFL+LL++L +HN+ I  V ++N     KL  P+IQKDIVN+ A E  N +I+D
Sbjct: 132 DSSDKGNFLELLQFLADHNESINEV-IQNCPKNNKLTHPNIQKDIVNAAACETTNAIIKD 191

Query: 201 MSDKQFSILIDESRDISSKEQMSIVLRYVD-KDHVVEQFVGIIHVNNTSALSLKQKLIWL 260
           + +  FS+L+DESRD S KEQM++VLRYVD K +V E+F+GI+HV +T+ALSLK  +  L
Sbjct: 192 LDNGFFSVLVDESRDTSIKEQMAVVLRYVDKKGNVTERFLGIVHVTDTTALSLKVAIESL 251

Query: 261 ------------GQFYP------------------------------------------- 320
                       GQ Y                                            
Sbjct: 252 FSKHGLSLSRLRGQGYDGASNMQGEFNGLKALILRENKSAYYVHCFAHQLQLTLVAVAKN 311

Query: 321 ----------------------------RDFTAIEISMLED--QLQN------------- 338
                                       RD   +EI    D  +LQ+             
Sbjct: 312 HNVIAEFFCLIAKLINIVGGSCKRRDALRDAQFVEIEKALDMGELQSGQGLNQETNLKRA 371

[Close]

BLAST of ClCG04G005215.1 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-50
Identity = 108/243 (44.44%), Postives = 154/243 (63.37%), Query Frame = 0


Query: 20  LYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVG-GPNS 79
           LY +WLEYS+ K+ AFCL CY+F+ + G Q GS+ F+S GF +W K + L+ HVG   NS
Sbjct: 77  LYGDWLEYSVEKEKAFCLYCYLFRDQAGNQGGSDSFLSTGFCSWNKADRLDQHVGLDVNS 136

Query: 80  THNQAWGKCE----QGLAFRGHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTL 139
            HN A  KCE    QGL+FRGHDE ++S N+ NFL+LL++    N+ +  V LKNA    
Sbjct: 137 FHNNAKRKCEDLMRQGLSFRGHDESEESTNKGNFLELLKYTAGQNEVVKKVVLKNAPKNN 196

Query: 140 KLIAPDIQKDIVNSIAVEIVNIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHV 199
           ++ +P IQKDIV+  + E+   +I +M +  F +L+DES D S+KEQM++V R+VDK  V
Sbjct: 197 QMTSPPIQKDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASNKEQMTVVFRFVDKYGV 256

Query: 200 V-EQFVGIIHVNNTSALSLKQKLIWLGQFYPRDFTAIEISMLEDQLQNYIIDMHSEFVEL 257
           V E+F+G+IHV  TS+LSLK  +  L   Y      + +  L  Q  +   +M  EF  L
Sbjct: 257 VKERFIGVIHVKETSSLSLKSAIDSLFAKY-----GLSLKKLRGQGYDGASNMKGEFNGL 314

[Close]

BLAST of ClCG04G005215.1 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-45
Identity = 107/279 (38.35%), Postives = 152/279 (54.48%), Query Frame = 0


Query: 20  LYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVG-GPNS 79
           LY +WLEYS+ K+ AFCL CY+F+ + G Q GS+ F+S GF +W K + L+ HVG   NS
Sbjct: 77  LYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNKADRLDQHVGLDVNS 136

Query: 80  THNQAWGKCE----------------------------------------QGLAFRGHDE 139
            HN A  KCE                                        QGL FRGHDE
Sbjct: 137 FHNNAKRKCEDLMRQGQSIKHALHKQTDVVKNDYRIWLNASIDVSRHLLHQGLPFRGHDE 196

Query: 140 IDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVI 199
            ++S N+ NF++LL++    N+ +  V LKNA    ++ +P IQKDIV+  + E+   +I
Sbjct: 197 SEESTNKGNFVELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSKEVTRSII 256

Query: 200 RDMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVV-EQFVGIIHVNNTSALSLKQKLI 257
            +M +  F +L+DES D S KEQM++V R+VDK  VV E+F+G+IHV  TS+LSLK  + 
Sbjct: 257 EEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQETSSLSLKSAID 316

HSP 2 Score: 97.1 bits (240), Expect = 3.0e-20
Identity = 55/127 (43.31%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 213 KQKLIWLGQFYPRDFTAIEISMLEDQLQNYIIDMHSE--FVELKSIFDLAVKIIATNKDN 272
           K  L+ L +FYP DF+ +E   L+ QL+ Y+ ++ ++  F +LK + DLA  ++ T K  
Sbjct: 630 KSMLVRLTEFYPDDFSFVERRSLDHQLEIYLDNVKNDERFTDLKCLGDLARVMVETRKHL 689

Query: 273 VYPLVYRLLTLTLILLVATTIVERTFSAMKIVKARLCNRMRDQWMNDCLIAYIEKDLLDK 332
            +PLVYRLL ++LIL VAT  VER FSAM  VK  L NR+ D +++DCL+ +IEK  L+ 
Sbjct: 690 SHPLVYRLLKVSLILPVATATVERCFSAMNFVKTTLRNRIGDMFLSDCLVCFIEKQALNT 749

Query: 333 LNDKVII 338
           + ++ +I
Sbjct: 750 VTNESVI 756

[Close]

BLAST of ClCG04G005215.1 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 171.8 bits (434), Expect = 9.5e-43
Identity = 143/542 (26.38%), Postives = 210/542 (38.75%), Query Frame = 0


Query: 20  LYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNST 79
           LYS WLEYS+ KD A+CL CY+F+  +  +SGS+ F ++GF  WK  + L  HVG  NS 
Sbjct: 11  LYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTWKNPQSLREHVGLVNSF 70

Query: 80  HNQAWGKCE----------------------------------------QGLAFRGHDEI 139
           HN A  + +                                        QGL FRGHDE 
Sbjct: 71  HNNALKRADCLMRQGQSIVHAFYKQDDIVKGEYRIRLNASIDCCRYLVRQGLTFRGHDES 130

Query: 140 DDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIR 199
            DS N+ NFL+L+++    N+ +  V L+NA    +++ P IQ+DIV+    E++  +I+
Sbjct: 131 VDSANRGNFLELVKYTAGQNEVVSKVVLENAPKNNQMVCPKIQRDIVHCFVEEVIRSIIQ 190

Query: 200 DMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVV-EQFVGIIHVNNT----------- 259
           ++    F +++DES DI  KEQM +V R+VDK   V E+F+G+IHV  T           
Sbjct: 191 EVDHDVFCLMVDESADIFDKEQMVVVFRFVDKHATVKERFIGLIHVKETFSAFLKCAIDS 250

Query: 260 ----SALSLKQ------------------------------------------------- 319
                 LS+KQ                                                 
Sbjct: 251 LFAKHGLSIKQIRGQDYDGASNMKGEFNGLRYLILRENSSAYYIHCFAHQLQLVVVAVAK 310

Query: 320 ------------------------------------------------------------ 338
                                                                       
Sbjct: 311 KHFEIGDFFDMISVLINVVEASCKRKDRVRDEFRKKLEEGINQVALQRKDQDILNAMSLV 370

[Close]

BLAST of ClCG04G005215.1 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 143/570 (25.09%), Postives = 210/570 (36.84%), Query Frame = 0


Query: 20  LYSNWLEYSILKDDAFCLCCYMFKPEVGEQSGSECFVSEGFSNWKKKEILNSHVGGPNST 79
           LYS WLEYS+ KD A+CL CY+F+  +  +SGS+ F ++GF  WK  + L  HVG  NS 
Sbjct: 11  LYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTWKNPQSLREHVGLVNSF 70

Query: 80  HNQAWGKCE----------------------------------------QGLAFRGHDEI 139
           HN A  + +                                        QGL FRGHDE 
Sbjct: 71  HNNALKRADCLMRQGQSIVHAFYKQDDIVKGEYRIRLNASIDCCRYLVRQGLTFRGHDES 130

Query: 140 DDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNSIAVEIVNIVIR 199
            DS N+ NFL+L+++    N+ +  V L+NA    +++ P IQ+DIV+    E++  +I+
Sbjct: 131 VDSANRGNFLELVKYTAGQNEVVSKVVLENAPKNNQMVCPKIQRDIVHCFVEEVIRSIIQ 190

Query: 200 DMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVV-EQFVGIIHVNNT----------- 259
           ++    F +++DES DI  KEQM +V R+VDK   V E+F+G+IHV  T           
Sbjct: 191 EVDHDVFCLMVDESADIFDKEQMVVVFRFVDKHATVKERFIGLIHVKETFSAFLKCAIDS 250

Query: 260 ----SALSLKQ------------------------------------------------- 319
                 LS+KQ                                                 
Sbjct: 251 LFAKHGLSIKQIRGQDYDGASNMKGEFNGLRYLILRENSSAYYIHCFAHQLQLVVVAVAK 310

Query: 320 ------------------------------------------------------------ 338
                                                                       
Sbjct: 311 KHFEIGDFFDMISVLINVVEASCKRKDRVRDEFRKKLEEGINQVDLFSFIIKMLEWIEDD 370

[Close]

BLAST of ClCG04G005215.1 vs. TAIR 10
Match: AT3G29763.1 (General transcription factor 2-related zinc finger protein )

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-27
Identity = 62/129 (48.06%), Postives = 90/129 (69.77%), Query Frame = 0


Query: 89  QGLAFRGHDEIDDSKNQDNFLKLLRWLCNHNKDIGVVTLKNALNTLKLIAPDIQKDIVNS 148
           QGL FRGHDE ++S N+ NFL+LL+++   N+ +  V LKNA    ++ +P IQKDIV+ 
Sbjct: 55  QGLPFRGHDESEESTNKGNFLELLKYIAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHC 114

Query: 149 IAVEIVNIVIRDMSDKQFSILIDESRDISSKEQMSIVLRYVDKDHVV-EQFVGIIHVNNT 208
            + E+   +I +M +  F +L+DES D S KEQM++V R+VDK  VV E+F+G+IHV  T
Sbjct: 115 FSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGVIHVQET 174

Query: 209 SALSLKQKL 217
           S+LSLK  +
Sbjct: 175 SSLSLKSAI 183

The following BLAST results are available for this feature:

BLAST of ClCG04G005215.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_021828840.1	1.7e-73	47.69	uncharacterized protein LOC110769211 isoform X5 [Prunus avium]	[more]
XP_028054201.1	2.4e-72	45.50	uncharacterized protein LOC114258446 [Camellia sinensis]	[more]
XP_021828838.1	1.5e-69	36.00	uncharacterized protein LOC110769211 isoform X3 [Prunus avium]	[more]
XP_008245511.1	2.8e-65	29.94	PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume]	[more]
XP_028079852.1	1.4e-64	56.02	zinc finger MYM-type protein 1-like [Camellia sinensis]	[more]

BLAST of ClCG04G005215.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5SVZ6	4.3e-08	26.52	Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1	[more]

BLAST of ClCG04G005215.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P5TP52	8.1e-74	47.69	uncharacterized protein LOC110769211 isoform X5 OS=Prunus avium OX=42229 GN=LOC1...	[more]
A0A6P5TMI4	7.1e-70	36.00	uncharacterized protein LOC110769211 isoform X3 OS=Prunus avium OX=42229 GN=LOC1...	[more]
A0A2N9J031	1.4e-62	32.55	TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563...	[more]
A0A5B7AXL6	9.2e-62	28.47	Putative zinc finger MYM-type protein 1-like (Fragment) OS=Davidia involucrata O...	[more]
A0A2N9HSH6	2.7e-61	36.49	TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44919...	[more]

BLAST of ClCG04G005215.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09660.1	4.7e-50	44.44	CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Ara...	[more]
AT1G19260.1	3.5e-45	38.35	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT2G06541.2	9.5e-43	26.38	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT2G06541.1	1.7e-39	25.09	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT3G29763.1	1.1e-27	48.06	General transcription factor 2-related zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006580	Zinc finger, TTF-type	SMART	SM00597	2118neu4	coord: 9..98 e-value: 7.9E-17 score: 71.9
IPR025398	Domain of unknown function DUF4371	PFAM	PF14291	DUF4371	coord: 88..217 e-value: 5.5E-35 score: 121.0
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 255..327 e-value: 8.7E-7 score: 28.6
None	No IPR available	PANTHER	PTHR11697:SF219	OS02G0301400 PROTEIN	coord: 89..217 coord: 215..331
None	No IPR available	PANTHER	PTHR11697	GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN	coord: 89..217 coord: 215..331

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG04G005215	ClCG04G005215	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG04G005215.1-exon	ClCG04G005215.1-exon-CG_Chr04:18890412..18890790	exon
ClCG04G005215.1-exon	ClCG04G005215.1-exon-CG_Chr04:18893478..18893851	exon
ClCG04G005215.1-exon	ClCG04G005215.1-exon-CG_Chr04:18893970..18894184	exon
ClCG04G005215.1-exon	ClCG04G005215.1-exon-CG_Chr04:18894402..18894444	exon
ClCG04G005215.1-exon	ClCG04G005215.1-exon-CG_Chr04:18894833..18894838	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG04G005215.1-cds	ClCG04G005215.1-cds-CG_Chr04:18890412..18890790	CDS
ClCG04G005215.1-cds	ClCG04G005215.1-cds-CG_Chr04:18893478..18893851	CDS
ClCG04G005215.1-cds	ClCG04G005215.1-cds-CG_Chr04:18893970..18894184	CDS
ClCG04G005215.1-cds	ClCG04G005215.1-cds-CG_Chr04:18894402..18894444	CDS
ClCG04G005215.1-cds	ClCG04G005215.1-cds-CG_Chr04:18894833..18894838	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG04G005215.1	ClCG04G005215.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity