ClCG01G011010.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G011010.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	leucine-rich repeat extensin-like protein 3
Location	CG_Chr01: 17380049 .. 17381681 (+)
Sequence length	1425
RNA-Seq Expression	ClCG01G011010.2
Synteny	ClCG01G011010.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTTAGTTTAGCACCACACTGCCGCGGATTTAGTGGTTATTTTTAATTAGAAACCCAAAATCCGAAAAGAGATCACAAATCCCAATTCCCAATCGCAATCCCATCTCTAAATAACGACAATTCTAAGGATGGTTACGTGTTTGGATCTCACTCTTTCCTCTAACTACCATCACCAATTGCGGTTTCCATTTCTCTCTCTCTCTATCTCTCTCTCTTCTCTGATTCAGATGCCATTTGGGTCTAATTCATTGCCCTTTCTTTTTCATTCTCCCCTTTTTCTCTTCTTTTCTGTATAGCCGACATTTTCCCCCAACAGAGCAACTCATCCATGGCGGACGCCAAGGTTAATACTCTCTCTTCTTCATATTCCTCATTCTTTCATGATCATAATACTCTTTTCATTTTCTGTTCTTATATTCTTCTTTTTTGTTTCATTTTTGAGTTTCATGTCTCTGTTTAACAGAAGGTTGTGGTCATGATGCTTAAAGTGGACTTACAGTGTGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTTTGCAAATTCCCTCGTGAGTTCTTCCTTCCTCCTTTATATCAATTTCTTTTTTTTGTTTTTTGAAATGGAATTCCGACGCCTGAGTTCATCATTTTTCTGAACAAGAGAAATTCGAGACCAGATTTATGATGAAAAACAAAACGTTGTGGTTATCAAAGTGGTTTGTTGCAATCCTGAGAAGCTGAGAGATAAAATTTGCTGTAAAGGATGTGGTGTTATTAAAAGTATTGAAATCAAAGACCCTGAAGTTCCCAAGCCCCCTCCGCCCAAGCCCGCCGATCCTCCACCGCCCAAAAAGGCCGATCCGCCGCCACCCAAAAAAGCTGATCCTCCGCCTCCCAAAAAACCCGATCCCCCACCACCCCAAAAAGTCGATCCTCCACCTCCTAAAAAGGCCGATCCTCCACCCCCCAAAAAGGCCGACCCACCGCCACCCAAAGCCGATCCTCCGCCACCCAAAAAAGCCGCCGACCCTCCTCCCCAAAAGGCCGCCGACCCTCCGCCGCCCAAAAAGGCTGACCCTCCACCCCCGAAGGCGGACCCTCCGCCTCCAAAGAAAGTAGATCCTCCACCGGTAGTGGTTCCGGAGCCCACCCCGGTTCACATTCCGACGCCGGTTCAACCGGAGCCGTATCCGGTAAACATATGCGTGCCGGTTCCGGGTTACCCGCCGGGTTACCCGATTGGGATGTGCTGCAGGCAGTGCTATGAAGGGCGGGGTGGGGGCCCATGTTATAGTGGGTTTGGTGGGCCCAGCCCATGTTGCGATGGATGTGCTTCGGGAAGGCCCATTTACGACAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCACTGTGAGTATCTTAATGAAGAAAATGCATCTGGGTGCATTGTTATGTGAGACACGTGGCACTTTGTGAATGGTGGTCATTAATGCTCATGGGTCATGATAATAAGGAAAAGGTGAAGGCAGTTGTGTTAATGTTCCCTTTTAGTTTTGTATAATAATAATCTAAGTTCTTGCTCACTATTAGATATGTCTAAATATAAATGTTGGACGTATAATCCCAATTTAATTTTATTTTTAATAAAGTAATCAGATCAGATTATTCAA

mRNA sequence

TAGTTTAGTTTAGCACCACACTGCCGCGGATTTAGTGGTTATTTTTAATTAGAAACCCAAAATCCGAAAAGAGATCACAAATCCCAATTCCCAATCGCAATCCCATCTCTAAATAACGACAATTCTAAGGATGGTTACGTGTTTGGATCTCACTCTTTCCTCTAACTACCATCACCAATTGCGGTTTCCATTTCTCTCTCTCTCTATCTCTCTCTCTTCTCTGATTCAGATGCCATTTGGGTCTAATTCATTGCCCTTTCTTTTTCATTCTCCCCTTTTTCTCTTCTTTTCTGTATAGCCGACATTTTCCCCCAACAGAGCAACTCATCCATGGCGGACGCCAAGAAGGTTGTGGTCATGATGCTTAAAGTGGACTTACAGTGTGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTTTGCAAATTCCCTCGTGAAGAAATTCGAGACCAGATTTATGATGAAAAACAAAACGTTGTGGTTATCAAAGTGGTTTGTTGCAATCCTGAGAAGCTGAGAGATAAAATTTGCTGTAAAGGATGTGGTGTTATTAAAAGTATTGAAATCAAAGACCCTGAAGTTCCCAAGCCCCCTCCGCCCAAGCCCGCCGATCCTCCACCGCCCAAAAAGGCCGATCCGCCGCCACCCAAAAAAGCTGATCCTCCGCCTCCCAAAAAACCCGATCCCCCACCACCCCAAAAAGTCGATCCTCCACCTCCTAAAAAGGCCGATCCTCCACCCCCCAAAAAGGCCGACCCACCGCCACCCAAAGCCGATCCTCCGCCACCCAAAAAAGCCGCCGACCCTCCTCCCCAAAAGGCCGCCGACCCTCCGCCGCCCAAAAAGGCTGACCCTCCACCCCCGAAGGCGGACCCTCCGCCTCCAAAGAAAGTAGATCCTCCACCGGTAGTGGTTCCGGAGCCCACCCCGGTTCACATTCCGACGCCGGTTCAACCGGAGCCGTATCCGGTAAACATATGCGTGCCGGTTCCGGGTTACCCGCCGGGTTACCCGATTGGGATGTGCTGCAGGCAGTGCTATGAAGGGCGGGGTGGGGGCCCATGTTATAGTGGGTTTGGTGGGCCCAGCCCATGTTGCGATGGATGTGCTTCGGGAAGGCCCATTTACGACAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCACTGTGAGTATCTTAATGAAGAAAATGCATCTGGGTGCATTGTTATGTGAGACACGTGGCACTTTGTGAATGGTGGTCATTAATGCTCATGGGTCATGATAATAAGGAAAAGGTGAAGGCAGTTGTGTTAATGTTCCCTTTTAGTTTTGTATAATAATAATCTAAGTTCTTGCTCACTATTAGATATGTCTAAATATAAATGTTGGACGTATAATCCCAATTTAATTTTATTTTTAATAAAGTAATCAGATCAGATTATTCAA

Coding sequence (CDS)

ATGGCGGACGCCAAGAAGGTTGTGGTCATGATGCTTAAAGTGGACTTACAGTGTGATCGCTGCTACAAGAAAGTCAAGAAAGTTCTTTGCAAATTCCCTCGTGAAGAAATTCGAGACCAGATTTATGATGAAAAACAAAACGTTGTGGTTATCAAAGTGGTTTGTTGCAATCCTGAGAAGCTGAGAGATAAAATTTGCTGTAAAGGATGTGGTGTTATTAAAAGTATTGAAATCAAAGACCCTGAAGTTCCCAAGCCCCCTCCGCCCAAGCCCGCCGATCCTCCACCGCCCAAAAAGGCCGATCCGCCGCCACCCAAAAAAGCTGATCCTCCGCCTCCCAAAAAACCCGATCCCCCACCACCCCAAAAAGTCGATCCTCCACCTCCTAAAAAGGCCGATCCTCCACCCCCCAAAAAGGCCGACCCACCGCCACCCAAAGCCGATCCTCCGCCACCCAAAAAAGCCGCCGACCCTCCTCCCCAAAAGGCCGCCGACCCTCCGCCGCCCAAAAAGGCTGACCCTCCACCCCCGAAGGCGGACCCTCCGCCTCCAAAGAAAGTAGATCCTCCACCGGTAGTGGTTCCGGAGCCCACCCCGGTTCACATTCCGACGCCGGTTCAACCGGAGCCGTATCCGGTAAACATATGCGTGCCGGTTCCGGGTTACCCGCCGGGTTACCCGATTGGGATGTGCTGCAGGCAGTGCTATGAAGGGCGGGGTGGGGGCCCATGTTATAGTGGGTTTGGTGGGCCCAGCCCATGTTGCGATGGATGTGCTTCGGGAAGGCCCATTTACGACAGTTACGGTGGAGGGAGGCCCTGTTACGTTAGCCACTGTGAGTATCTTAATGAAGAAAATGCATCTGGGTGCATTGTTATGTGA

Protein sequence

MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLRDKICCKGCGVIKSIEIKDPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPPPPKADPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNICVPVPGYPPGYPIGMCCRQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM

Homology

[Close]

BLAST of ClCG01G011010.2 vs. NCBI nr
Match: XP_004139513.2 (circumsporozoite protein [Cucumis sativus] >KAE8652830.1 hypothetical protein Csa_022772 [Cucumis sativus])

HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-128
Identity = 261/294 (88.78%), Postives = 273/294 (92.86%), Query Frame = 0


Query: 3   DAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLR 62
           D KKVVVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEKLR
Sbjct: 4   DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEKLR 63

Query: 63  DKICCKGCGVIKSIEIKDPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPPPQ 122
           DKICCKGCGVIKSIEIK+PE PKPPPPKPADPPPPKK DPPP KK DPPPP+K DPPPP+
Sbjct: 64  DKICCKGCGVIKSIEIKEPEPPKPPPPKPADPPPPKKVDPPPSKKPDPPPPQKVDPPPPK 123

Query: 123 KVDPPPPKKADPPPPKK-ADPPPPK--ADPPPPKKAADPPPQKAADPPPPKKADPPPPKA 182
           K DPPPPKKAD PPP K ADPPPP+  ADPPPPKK ADPPP K ADPPPPKK DPPPPKA
Sbjct: 124 KADPPPPKKADTPPPSKAADPPPPQKAADPPPPKK-ADPPPPKKADPPPPKKVDPPPPKA 183

Query: 183 DPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNICVPVPGYPPGYPIGMCCRQCYEGR 242
           +PPPPKKVDPPPVVVP+PTPV IP PVQPEPYPVN+CVPVPGYPPGYPIG+CCRQC+EGR
Sbjct: 184 NPPPPKKVDPPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHEGR 243

Query: 243 GGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 294
           GGGPCYSGFGGP PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM
Sbjct: 244 GGGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 294

[Close]

BLAST of ClCG01G011010.2 vs. NCBI nr
Match: XP_008464282.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 457.2 bits (1175), Expect = 1.1e-124
Identity = 258/298 (86.58%), Postives = 270/298 (90.60%), Query Frame = 0


Query: 3   DAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLR 62
           D KKVVVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEKLR
Sbjct: 4   DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEKLR 63

Query: 63  DKICCKGCGVIKSIEIKDPEVPKPPPPKPAD-PPPPKKADPPPPKKADPPPPKKPDPPPP 122
           DKICCKGCGVIKSIEIK+PE PKPPPPK AD PPPPKK DPPPPKK DPPPP+K DPPPP
Sbjct: 64  DKICCKGCGVIKSIEIKEPEPPKPPPPKHADPPPPPKKVDPPPPKKPDPPPPQKVDPPPP 123

Query: 123 QKVDPPPPKKADPPPPKKADPPPPK--ADPPPPKKAADPPPQKAADPPPPKKADPPPPKA 182
           +K DPPPPKKADPPPPKK DPPPP   ADPPPP+KAADPPP K ADP PPKK DPPP KA
Sbjct: 124 KKADPPPPKKADPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKADPAPPKKVDPPPAKA 183

Query: 183 D--PPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNICVPVPGYPPGYP--IGMCCRQC 242
           +  PPPPKKVDPPPVVVP+P PV IP PVQPEPYPVN+CVPVPGYPPGYP  IG+CCRQC
Sbjct: 184 EPPPPPPKKVDPPPVVVPQPNPVPIPVPVQPEPYPVNMCVPVPGYPPGYPVGIGVCCRQC 243

Query: 243 YEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 294
           YEGRGGGPCYSGFGG  PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC+VM
Sbjct: 244 YEGRGGGPCYSGFGGTGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCVVM 299

[Close]

BLAST of ClCG01G011010.2 vs. NCBI nr
Match: XP_022927593.1 (leucine-rich repeat extensin-like protein 3 isoform X8 [Cucurbita moschata])

HSP 1 Score: 431.0 bits (1107), Expect = 8.1e-117
Identity = 253/301 (84.05%), Postives = 261/301 (86.71%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEK 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEK
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEK 60

Query: 61  LRDKICCKGCGVIKSIEIK-----DPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKK 120
           LRDKICCKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPPPKKADPPPP K
Sbjct: 61  LRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-K 120

Query: 121 PDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPP 180
            DPPPP+K DPPPP KADPPPPKKADPPPPKADPPPPKK ADPPP K ADPPPPKKADPP
Sbjct: 121 ADPPPPKKADPPPP-KADPPPPKKADPPPPKADPPPPKK-ADPPPPK-ADPPPPKKADPP 180

Query: 181 PPKADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNICVPVPGYPPGYPIGMCC 240
           PPKADPPPPKK DPPP    +P P   V    P QPEP+PVNICVPVPGYPP YPIGMCC
Sbjct: 181 PPKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCC 240

Query: 241 RQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIV 294
            QCYEG+GGGPCYSGFG P PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC V
Sbjct: 241 SQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSV 295

[Close]

BLAST of ClCG01G011010.2 vs. NCBI nr
Match: XP_022927591.1 (leucine-rich repeat extensin-like protein 3 isoform X6 [Cucurbita moschata])

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-115
Identity = 253/309 (81.88%), Postives = 261/309 (84.47%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEK 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEK
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEK 60

Query: 61  LRDKICCKGCGVIKSIEIK-----DPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKK 120
           LRDKICCKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPPPKKADPPPP K
Sbjct: 61  LRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-K 120

Query: 121 PDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPP 180
            DPPPP+K DPPPP KADPPPPKKADPPPPKADPPPPKK ADPPP K ADPPPPKKADPP
Sbjct: 121 ADPPPPKKADPPPP-KADPPPPKKADPPPPKADPPPPKK-ADPPPPK-ADPPPPKKADPP 180

Query: 181 PPKADPPPPKKVDPPPVVVPEPTP-----------VHIPTPVQPEPYPVNICVPVPGYPP 240
           PPKADPPPPKK DPPP    +P P           V    P QPEP+PVNICVPVPGYPP
Sbjct: 181 PPKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPP 240

Query: 241 GYPIGMCCRQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 294
            YPIGMCC QCYEG+GGGPCYSGFG P PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE
Sbjct: 241 AYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 300

[Close]

BLAST of ClCG01G011010.2 vs. NCBI nr
Match: XP_022927590.1 (leucine-rich repeat extensin-like protein 3 isoform X5 [Cucurbita moschata])

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-115
Identity = 255/309 (82.52%), Postives = 262/309 (84.79%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEK 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEK
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEK 60

Query: 61  LRDKICCKGCGVIKSIEIK-----DPEVPKPPPPKPADPPPPKKADPPPPK-------KA 120
           LRDKICCKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPPPK       KA
Sbjct: 61  LRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKA 120

Query: 121 DPPPPKKPDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPP 180
           DPPPPKK DPPPP K DPPPPKKADPPPPKKADPPPPKADPPPPKK ADPPP K ADPPP
Sbjct: 121 DPPPPKKADPPPP-KADPPPPKKADPPPPKKADPPPPKADPPPPKK-ADPPPPK-ADPPP 180

Query: 181 PKKADPPPP-KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNICVPVPGYPP 240
           PKKADPPPP KADPPPPKK DPPP    +P P   V    P QPEP+PVNICVPVPGYPP
Sbjct: 181 PKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPP 240

Query: 241 GYPIGMCCRQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 294
            YPIGMCC QCYEG+GGGPCYSGFG P PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE
Sbjct: 241 AYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 300

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy Swiss-Prot
Match: P23093 (Circumsporozoite protein OS=Plasmodium berghei (strain Anka) OX=5823 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 81/160 (50.62%), Postives = 86/160 (53.75%), Query Frame = 0


Query: 77  EIKDPEVP----KPPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPPPQKVDPPPPKKA 136
           ++K P  P     PPPP P DPPPP   DPPPP   DPPPP   DPPPP   DPPPP   
Sbjct: 88  KLKQPPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNANDPPPPNAN 147

Query: 137 DPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPPPPKA-DPPPPKKVDPPP 196
           DP PP   DP PP A+ P P  A DPPP  A DPPPP   DP PP A DPPPP   DP P
Sbjct: 148 DPAPPNANDPAPPNANDPAPPNANDPPPPNANDPPPPNPNDPAPPNANDPPPPNPNDPAP 207

Query: 197 V-----VVPEPTPVHIPTP-VQPEPYPVNICVPVPGYPPG 226
                   P+P P   P P  QP+P P     P P   PG
Sbjct: 208 PQGNNNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPG 247

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy Swiss-Prot
Match: P06915 (Circumsporozoite protein OS=Plasmodium berghei OX=5821 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.6e-05
Identity = 76/147 (51.70%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 86  PPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPPPQKVDPPPPKKADPPPPKKADPPPP 145
           PPPP P DPPPP   DPPPP   DPPPP   DPPPP   DPPPP   DP PP   DP PP
Sbjct: 93  PPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNANDPPPPNANDPAPPNANDPAPP 152

Query: 146 KADPPPPKKAADPPPQKAADPPPPKKADPPPPKA-DPPPPKKVDPPPV-----VVPEPTP 205
            A+ P P  A DP P  A DP PP   DP PP A DPPPP   DP P        P+P P
Sbjct: 153 NANDPAPPNANDPAPPNANDPAPPNANDPAPPNANDPPPPNPNDPAPPQGNNNPQPQPRP 212

Query: 206 VHIPTP-VQPEPYPVNICVPVPGYPPG 226
              P P  QP+P P     P P   PG
Sbjct: 213 QPQPQPQPQPQPQPQPQPRPQPQPQPG 239

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy TrEMBL
Match: A0A0A0LTA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.6e-129
Identity = 259/293 (88.40%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 3   DAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLR 62
           D KKVVVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEKLR
Sbjct: 4   DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEKLR 63

Query: 63  DKICCKGCGVIKSIEIKDPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPPPQ 122
           DKICCKGCGVIKSIEIK+PE PKPPPPKP        ADPPPPKK DPPP KKPDPPPPQ
Sbjct: 64  DKICCKGCGVIKSIEIKEPEPPKPPPPKP--------ADPPPPKKVDPPPSKKPDPPPPQ 123

Query: 123 KVDPPPPKKADPPPPKKADPPPPK--ADPPPPKKAADPPPQKAADPPPPKKADPPPPKAD 182
           KVDPPPPKKADPPPPKKAD PPP   ADPPPP+KAADPPP K ADPPPPKK DPPPPKA+
Sbjct: 124 KVDPPPPKKADPPPPKKADTPPPSKAADPPPPQKAADPPPPKKADPPPPKKVDPPPPKAN 183

Query: 183 PPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNICVPVPGYPPGYPIGMCCRQCYEGRG 242
           PPPPKKVDPPPVVVP+PTPV IP PVQPEPYPVN+CVPVPGYPPGYPIG+CCRQC+EGRG
Sbjct: 184 PPPPKKVDPPPVVVPQPTPVPIPVPVQPEPYPVNMCVPVPGYPPGYPIGVCCRQCHEGRG 243

Query: 243 GGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 294
           GGPCYSGFGGP PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM
Sbjct: 244 GGPCYSGFGGPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 286

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy TrEMBL
Match: A0A1S3CL41 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502210 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.1e-125
Identity = 258/298 (86.58%), Postives = 270/298 (90.60%), Query Frame = 0


Query: 3   DAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLR 62
           D KKVVVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEKLR
Sbjct: 4   DGKKVVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEKLR 63

Query: 63  DKICCKGCGVIKSIEIKDPEVPKPPPPKPAD-PPPPKKADPPPPKKADPPPPKKPDPPPP 122
           DKICCKGCGVIKSIEIK+PE PKPPPPK AD PPPPKK DPPPPKK DPPPP+K DPPPP
Sbjct: 64  DKICCKGCGVIKSIEIKEPEPPKPPPPKHADPPPPPKKVDPPPPKKPDPPPPQKVDPPPP 123

Query: 123 QKVDPPPPKKADPPPPKKADPPPPK--ADPPPPKKAADPPPQKAADPPPPKKADPPPPKA 182
           +K DPPPPKKADPPPPKK DPPPP   ADPPPP+KAADPPP K ADP PPKK DPPP KA
Sbjct: 124 KKADPPPPKKADPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKADPAPPKKVDPPPAKA 183

Query: 183 D--PPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNICVPVPGYPPGYP--IGMCCRQC 242
           +  PPPPKKVDPPPVVVP+P PV IP PVQPEPYPVN+CVPVPGYPPGYP  IG+CCRQC
Sbjct: 184 EPPPPPPKKVDPPPVVVPQPNPVPIPVPVQPEPYPVNMCVPVPGYPPGYPVGIGVCCRQC 243

Query: 243 YEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIVM 294
           YEGRGGGPCYSGFGG  PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC+VM
Sbjct: 244 YEGRGGGPCYSGFGGTGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCVVM 299

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy TrEMBL
Match: A0A6J1ELF4 (leucine-rich repeat extensin-like protein 3 isoform X8 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.9e-117
Identity = 253/301 (84.05%), Postives = 261/301 (86.71%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEK 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEK
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEK 60

Query: 61  LRDKICCKGCGVIKSIEIK-----DPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKK 120
           LRDKICCKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPPPKKADPPPP K
Sbjct: 61  LRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-K 120

Query: 121 PDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPP 180
            DPPPP+K DPPPP KADPPPPKKADPPPPKADPPPPKK ADPPP K ADPPPPKKADPP
Sbjct: 121 ADPPPPKKADPPPP-KADPPPPKKADPPPPKADPPPPKK-ADPPPPK-ADPPPPKKADPP 180

Query: 181 PPKADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNICVPVPGYPPGYPIGMCC 240
           PPKADPPPPKK DPPP    +P P   V    P QPEP+PVNICVPVPGYPP YPIGMCC
Sbjct: 181 PPKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCC 240

Query: 241 RQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCIV 294
            QCYEG+GGGPCYSGFG P PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC V
Sbjct: 241 SQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSV 295

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy TrEMBL
Match: A0A6J1EI38 (leucine-rich repeat extensin-like protein 3 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.6e-116
Identity = 253/309 (81.88%), Postives = 261/309 (84.47%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEK 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEK
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEK 60

Query: 61  LRDKICCKGCGVIKSIEIK-----DPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKK 120
           LRDKICCKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPPPKKADPPPP K
Sbjct: 61  LRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPP-K 120

Query: 121 PDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPP 180
            DPPPP+K DPPPP KADPPPPKKADPPPPKADPPPPKK ADPPP K ADPPPPKKADPP
Sbjct: 121 ADPPPPKKADPPPP-KADPPPPKKADPPPPKADPPPPKK-ADPPPPK-ADPPPPKKADPP 180

Query: 181 PPKADPPPPKKVDPPPVVVPEPTP-----------VHIPTPVQPEPYPVNICVPVPGYPP 240
           PPKADPPPPKK DPPP    +P P           V    P QPEP+PVNICVPVPGYPP
Sbjct: 181 PPKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPP 240

Query: 241 GYPIGMCCRQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 294
            YPIGMCC QCYEG+GGGPCYSGFG P PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE
Sbjct: 241 AYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 300

[Close]

BLAST of ClCG01G011010.2 vs. ExPASy TrEMBL
Match: A0A6J1EPE4 (leucine-rich repeat extensin-like protein 3 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.6e-116
Identity = 255/309 (82.52%), Postives = 262/309 (84.79%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEK 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFP  +IRDQIYDEKQN+V+IKVVCCNPEK
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFP--QIRDQIYDEKQNLVIIKVVCCNPEK 60

Query: 61  LRDKICCKGCGVIKSIEIK-----DPEVPKPPPPKPADPPPPKKADPPPPK-------KA 120
           LRDKICCKGCGVIKSIEIK      P+ P PPPPK ADPPPP K DPPPPK       KA
Sbjct: 61  LRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKA 120

Query: 121 DPPPPKKPDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPP 180
           DPPPPKK DPPPP K DPPPPKKADPPPPKKADPPPPKADPPPPKK ADPPP K ADPPP
Sbjct: 121 DPPPPKKADPPPP-KADPPPPKKADPPPPKKADPPPPKADPPPPKK-ADPPPPK-ADPPP 180

Query: 181 PKKADPPPP-KADPPPPKKVDPPPVVVPEPTP---VHIPTPVQPEPYPVNICVPVPGYPP 240
           PKKADPPPP KADPPPPKK DPPP    +P P   V    P QPEP+PVNICVPVPGYPP
Sbjct: 181 PKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPP 240

Query: 241 GYPIGMCCRQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 294
            YPIGMCC QCYEG+GGGPCYSGFG P PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE
Sbjct: 241 AYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNE 300

[Close]

BLAST of ClCG01G011010.2 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 8.0e-30
Identity = 125/298 (41.95%), Postives = 162/298 (54.36%), Query Frame = 0


Query: 5   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLRDK 64
           +KV +M LKVDL C +CYKKVKKVLCKFP  +IRDQ++DEK N+V+IKVVCC+PE++ DK
Sbjct: 7   EKVTMMKLKVDLDCAKCYKKVKKVLCKFP--QIRDQLFDEKSNIVIIKVVCCSPERIMDK 66

Query: 65  ICCKGCGVIKSIEIKDPEVPKPPPPKPADPP-PPKKADPPPPKKADPPPPKKPDPPPPQK 124
           +C KG G IK+IEI +P  PKPP P+P  PP  PK A P  P+K     PK+P+ P    
Sbjct: 67  LCSKGGGSIKTIEIVEP--PKPPQPQPQQPPQKPKDAQPKAPEK-----PKEPEKP---- 126

Query: 125 VDPPPPKKADPPPPKKADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPPPPKADPPP 184
               P K  +P  PK+ +       P  P+K   P P  A  P P  K  P P  A  P 
Sbjct: 127 --KQPEKLKEPEKPKQPE------KPKEPEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPA 186

Query: 185 PKKVDPPPVVVPEPTPVHIPTPVQPEPYPVNICVPVPGYPPGYPIGMCCRQCYEGRGGGP 244
           PK+  PPP  +P                           P G P  MCC   Y+G  GGP
Sbjct: 187 PKQPGPPPQAIPM-------------------------MPQGQP-AMCCGPYYDGY-GGP 246

Query: 245 CYSGFGGPSPCCDGCASGRPIYDSYGGG--------RPCYVSHCEYLNEENASGCIVM 294
            ++G+G P    +    GRP+Y+S+GGG        R C+V+ C+Y +EEN   C +M
Sbjct: 247 AFNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 254

[Close]

BLAST of ClCG01G011010.2 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-18
Identity = 104/267 (38.95%), Postives = 137/267 (51.31%), Query Frame = 0


Query: 36  EIRDQIYDEKQNVVVIKVVCCNPEKLRDKICCKGCGVIKSIEIKDPEVPKPPPPKPADPP 95
           EIRDQ++DEK N+V+IKVVCC+PE++ DK+C KG G IK+IEI +P  PKPP P+P  PP
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEP--PKPPQPQPQQPP 74

Query: 96  -PPKKADPPPPKKADPPPPKKPDPPPPQKVDPPPPKKADPPPPKKADPPPPKADPPPPKK 155
             PK A P  P+K     PK+P+ P        P K  +P  PK+ +       P  P+K
Sbjct: 75  QKPKDAQPKAPEK-----PKEPEKP------KQPEKLKEPEKPKQPE------KPKEPEK 134

Query: 156 AADPPPQKAADPPPPKKADPPPPKADPPPPKKVDPPPVVVPEPTPVHIPTPVQPEPYPVN 215
              P P  A  P P  K  P P  A  P PK+  PPP  +P                   
Sbjct: 135 TKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQAIPM------------------ 194

Query: 216 ICVPVPGYPPGYPIGMCCRQCYEGRGGGPCYSGFGGPSPCCDGCASGRPIYDSYGGG--- 275
                   P G P  MCC   Y+G  GGP ++G+G P    +    GRP+Y+S+GGG   
Sbjct: 195 -------MPQGQP-AMCCGPYYDGY-GGPAFNGYGMPPQPYE--CYGRPVYESWGGGCPP 233

Query: 276 -----RPCYVSHCEYLNEENASGCIVM 294
                R C+V+ C+Y +EEN   C +M
Sbjct: 255 PPPAYRQCHVTRCDYFSEENPQSCSIM 233

[Close]

BLAST of ClCG01G011010.2 vs. TAIR 10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-15
Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 4   AKKVVVMMLKVDLQCDRCYKKVKKVLCKFPREEIRDQIYDEKQNVVVIKVVCCNPEKLRD 63
           A+KVV+M LKVDL C +CYKKVKK + KFP  +I D+++DEK N ++IKVVC +PE+L +
Sbjct: 2   AEKVVMMKLKVDLNCSKCYKKVKKAIRKFP--QITDELFDEKSNTIIIKVVCYDPERLMN 61

Query: 64  KICCKGCGVIKSIEIKDPEVPKPPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPP 121
           K+C KG G IKSI I +P  PKPP P+P  PP    A  P P +A  P   +P P P
Sbjct: 62  KLCYKGDGSIKSIVILEP--PKPPQPQP-QPPQKPTAPAPAPAQAQAPALVRPAPVP 113

[Close]

BLAST of ClCG01G011010.2 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 46.6 bits (109), Expect = 4.0e-05
Identity = 68/134 (50.75%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 81  PEVPK--PPPPKPADPPPPKKADPPPPKKADPPPPKKPDPPPPQKVDPPPPKKADPPPPK 140
           P  PK  PPPPKP+ PPP  K  PPPPK + PPP  K  PPPP+   PPP  K  PPPPK
Sbjct: 110 PRTPKKSPPPPKPSSPPPIPKKSPPPPKPSSPPPTPKKSPPPPKPSSPPPSPKKSPPPPK 169

Query: 141 KADPPPPKADPPPPKKAADPPPQKAADPPPPKKADPPPPKADPPPPKKVDPPPVVVPEPT 200
            +  PP  + PPP  K + P P K + PPP  K  PPPPK  P PPK   PPP     P 
Sbjct: 170 PSPSPPKPSTPPPTPKKSPPSPPKPSSPPPSPKKSPPPPKPSPSPPKPSTPPPTPKKSPP 229

Query: 201 PVHIPTPVQPEPYP 213
           P   P P QP P P
Sbjct: 230 P---PKPSQPPPKP 240

The following BLAST results are available for this feature:

BLAST of ClCG01G011010.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139513.2	2.0e-128	88.78	circumsporozoite protein [Cucumis sativus] >KAE8652830.1 hypothetical protein Cs...	[more]
XP_008464282.1	1.1e-124	86.58	PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]	[more]
XP_022927593.1	8.1e-117	84.05	leucine-rich repeat extensin-like protein 3 isoform X8 [Cucurbita moschata]	[more]
XP_022927591.1	1.2e-115	81.88	leucine-rich repeat extensin-like protein 3 isoform X6 [Cucurbita moschata]	[more]
XP_022927590.1	1.2e-115	82.52	leucine-rich repeat extensin-like protein 3 isoform X5 [Cucurbita moschata]	[more]

BLAST of ClCG01G011010.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23093	1.6e-06	50.63	Circumsporozoite protein OS=Plasmodium berghei (strain Anka) OX=5823 PE=3 SV=1	[more]
P06915	6.6e-05	51.70	Circumsporozoite protein OS=Plasmodium berghei OX=5821 PE=3 SV=1	[more]

BLAST of ClCG01G011010.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTA1	2.6e-129	88.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172590 PE=4 SV=1	[more]
A0A1S3CL41	5.1e-125	86.58	leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502...	[more]
A0A6J1ELF4	3.9e-117	84.05	leucine-rich repeat extensin-like protein 3 isoform X8 OS=Cucurbita moschata OX=...	[more]
A0A6J1EI38	5.6e-116	81.88	leucine-rich repeat extensin-like protein 3 isoform X6 OS=Cucurbita moschata OX=...	[more]
A0A6J1EPE4	5.6e-116	82.52	leucine-rich repeat extensin-like protein 3 isoform X5 OS=Cucurbita moschata OX=...	[more]

BLAST of ClCG01G011010.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16380.1	8.0e-30	41.95	Heavy metal transport/detoxification superfamily protein	[more]
AT4G16380.2	1.4e-18	38.95	Heavy metal transport/detoxification superfamily protein	[more]
AT1G51090.1	1.9e-15	52.99	Heavy metal transport/detoxification superfamily protein	[more]
AT1G44191.1	4.0e-05	50.75	ECA1 gametogenesis related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..198
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 4..166
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 162..293
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 162..293
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 4..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG01G011010	ClCG01G011010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G011010.2-exon	ClCG01G011010.2-exon-CG_Chr01:17380049..17380393	exon
ClCG01G011010.2-exon	ClCG01G011010.2-exon-CG_Chr01:17380514..17380602	exon
ClCG01G011010.2-exon	ClCG01G011010.2-exon-CG_Chr01:17380691..17381681	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G011010.2-five_prime_utr	ClCG01G011010.2-five_prime_utr-CG_Chr01:17380049..17380378	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G011010.2-cds	ClCG01G011010.2-cds-CG_Chr01:17380379..17380393	CDS
ClCG01G011010.2-cds	ClCG01G011010.2-cds-CG_Chr01:17380514..17380602	CDS
ClCG01G011010.2-cds	ClCG01G011010.2-cds-CG_Chr01:17380691..17381468	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G011010.2-three_prime_utr	ClCG01G011010.2-three_prime_utr-CG_Chr01:17381469..17381681	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG01G011010.2	ClCG01G011010.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus
molecular_function	GO:0046872	metal ion binding