ClCG01G009272.1 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G009272.1
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Lipid transfer protein
Location	CG_Chr01: 12619791 .. 12620084 (+)
Sequence length	294
RNA-Seq Expression	ClCG01G009272.1
Synteny	ClCG01G009272.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGCTATTGTGGGTACGAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACAAAAAAAATTATATCTCAATGTGGGGTTGCCACCCCGAAATGCTAG

mRNA sequence

ATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGCTATTGTGGGTACGAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACAAAAAAAATTATATCTCAATGTGGGGTTGCCACCCCGAAATGCTAG

Coding sequence (CDS)

ATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGCTATTGTGGGTACGAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACAAAAAAAATTATATCTCAATGTGGGGTTGCCACCCCGAAATGCTAG

Protein sequence

MKKALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC

Homology

[Close]

BLAST of ClCG01G009272.1 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 7  MKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYC 66
          M+G+ LLV    VV NETQ+ +AVKC+  ELRPC  ++TMS+EPSSACC KV + + CYC
Sbjct: 1  MRGIWLLV----VVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYC 60

Query: 67 GYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           Y KNPK QPYL+ DAT++IIS CGVA P C
Sbjct: 61 EYSKNPKTQPYLKYDATQRIISDCGVAIPTC 87

[Close]

BLAST of ClCG01G009272.1 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida])

HSP 1 Score: 99.0 bits (245), Expect = 2.4e-17
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 3  KALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQK 62
          K LS   + LLV+ M+ +    +L EAV C   EL PC+ A+T +  PS+ACC+K+KEQ+
Sbjct: 2  KNLSFTSLHLLVVAMAALLTGARLAEAVTCSTMELSPCIGAFTSTAPPSAACCSKLKEQQ 61

Query: 63 QCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           C+CGY KNPK+  Y++    K +IS CGV+ PKC
Sbjct: 62 PCFCGYIKNPKLGAYVKSPRAKTVISTCGVSFPKC 96

[Close]

BLAST of ClCG01G009272.1 vs. NCBI nr
Match: KAE8648143.1 (hypothetical protein Csa_023893, partial [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 15 LVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKI 74
          ++++V   E QL  A  C+  E+R C++AYT S  PSS+CC+ V++ + CYC Y+KNP  
Sbjct: 1  MLLAVFVKEAQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTF 60

Query: 75 QPYLQEDATKKIISQCGVATPKC 98
          Q YLQ   TKKII+QCG+  P C
Sbjct: 61 QSYLQSPTTKKIIAQCGITLPSC 83

[Close]

BLAST of ClCG01G009272.1 vs. NCBI nr
Match: GAU46076.1 (hypothetical protein TSUD_180120 [Trifolium subterraneum])

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 5  LSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQC 64
          + MK +C ++L++ ++     +VEAV C   ELRPCL A T +  PS+ CCNK+KEQ  C
Sbjct: 2  MKMKVVCAMMLMVVLMVEVATIVEAVDCNPLELRPCLGAITSNTPPSAECCNKLKEQIPC 61

Query: 65 YCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           CGY KNP + PY+     K++ S CGVATP+C
Sbjct: 62 LCGYIKNPVLSPYVGSPGAKRVASSCGVATPQC 94

[Close]

BLAST of ClCG01G009272.1 vs. NCBI nr
Match: XP_022759947.1 (non-specific lipid-transfer protein 2-like [Durio zibethinus])

HSP 1 Score: 97.1 bits (240), Expect = 9.2e-17
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 3  KALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQK 62
          K  S    C   LV+ + + ET+ VEAV C+  +L PCL A T S  PS+ CC+K+KEQ+
Sbjct: 2  KRFSFVSFCAAALVLLLFSGETRTVEAVTCDPSQLSPCLAAITSSKPPSATCCSKLKEQQ 61

Query: 63 QCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           C+CGY KNP I+ ++    +K++ S CGVA PKC
Sbjct: 62 PCFCGYLKNPTIKQFVDNPDSKRVASTCGVAYPKC 96

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-14
Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 1  MKKALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKE 60
          MK  + M  +C +V+V   + +   + EAV C   EL  C+ A T   +PSS CC+K+K 
Sbjct: 3  MKMKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKV 62

Query: 61 QKQCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
          Q+ C C Y KNP ++ Y+     KK++S CGV  P C
Sbjct: 63 QEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 32 CEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKIISQCG 91
          C A +L PCL A T +  PS+ACCNK+KEQK C CGY K+P ++ Y+     +K  S CG
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 92 VATPKC 98
          VA  KC
Sbjct: 63 VAL-KC 67

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10
Identity = 26/68 (38.24%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 30 VKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKIISQ 89
          V C   +L PCL          + CC K++EQ+ C CGY KNP ++ Y+     +K+ S 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 90 CGVATPKC 98
          CGV  P+C
Sbjct: 61 CGVPVPQC 68

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 7  MKGMCLLVLVMSVVA---NETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQ 66
          M+ + +LVL +++VA        V    C A +L  C  A      P++ACC+ ++ Q+ 
Sbjct: 2  MRRLAVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQG 61

Query: 67 CYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
          C+C + K+P+   Y+     +K +S CG+A P C
Sbjct: 62 CFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08
Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 7  MKGMCLLVLVMSVVA---NETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQ 66
          M+ + +LVL +++VA        V    C A +L  C  A      P++ACC+ ++ Q+ 
Sbjct: 2  MRKLAVLVLAVAMVAACGGGVVGVAGAGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQG 61

Query: 67 CYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
          C+C + K+P+   Y+     +K +S CG+A P C
Sbjct: 62 CFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.1e-23
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 7  MKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYC 66
          M+G+ LLV    VV NETQ+ +AVKC+  ELRPC  ++TMS+EPSSACC KV + + CYC
Sbjct: 1  MRGIWLLV----VVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYC 60

Query: 67 GYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           Y KNPK QPYL+ DAT++IIS CGVA P C
Sbjct: 61 EYSKNPKTQPYLKYDATQRIISDCGVAIPTC 87

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy TrEMBL
Match: A0A2Z6NR57 (AAI domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_180120 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 5  LSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQC 64
          + MK +C ++L++ ++     +VEAV C   ELRPCL A T +  PS+ CCNK+KEQ  C
Sbjct: 2  MKMKVVCAMMLMVVLMVEVATIVEAVDCNPLELRPCLGAITSNTPPSAECCNKLKEQIPC 61

Query: 65 YCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           CGY KNP + PY+     K++ S CGVATP+C
Sbjct: 62 LCGYIKNPVLSPYVGSPGAKRVASSCGVATPQC 94

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy TrEMBL
Match: A0A6P6A579 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306314 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.4e-17
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 3  KALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQK 62
          K  S    C   LV+ + + ET+ VEAV C+  +L PCL A T S  PS+ CC+K+KEQ+
Sbjct: 2  KRFSFVSFCAAALVLLLFSGETRTVEAVTCDPSQLSPCLAAITSSKPPSATCCSKLKEQQ 61

Query: 63 QCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           C+CGY KNP I+ ++    +K++ S CGVA PKC
Sbjct: 62 PCFCGYLKNPTIKQFVDNPDSKRVASTCGVAYPKC 96

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy TrEMBL
Match: A0A6P4QB35 (non-specific lipid-transfer protein 2 OS=Gossypium arboreum OX=29729 GN=LOC108482197 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 3  KALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQK 62
          K +S   +C++ L + + + E+++ EAV C   EL PCL A+T S  PS+ACC+K+K QK
Sbjct: 2  KRVSFVALCVVALSVVLFSGESRMAEAVTCNPTELSPCLSAFTSSSPPSAACCSKLKAQK 61

Query: 63 QCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           C CGY KNP ++ Y+     KK+ S CGV  PKC
Sbjct: 62 PCLCGYIKNPSLKQYVNSPNAKKVASTCGVTYPKC 96

[Close]

BLAST of ClCG01G009272.1 vs. ExPASy TrEMBL
Match: A0A2P5YU65 (AAI domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G056300v1 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 3  KALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQK 62
          K +S   +C++ L + + + E+++ EAV C   EL PCL A+T S  PS+ACC+K+K QK
Sbjct: 2  KRVSFVALCVVALSVVLFSGESRMAEAVTCNPTELSPCLSAFTSSSPPSAACCSKLKAQK 61

Query: 63 QCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
           C CGY KNP ++ Y+     KK+ S CGV  PKC
Sbjct: 62 PCLCGYIKNPSLKQYVNSPNAKKVASTCGVTYPKC 96

[Close]

BLAST of ClCG01G009272.1 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 7.7e-14
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 30  VKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKIISQ 89
           V C+A++L+PCL A T   +PS ACC K+ EQ+ C CG+ KNP    Y+     +K++  
Sbjct: 35  VTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNPAFAQYISSPNARKVLLA 94

Query: 90  CGVATPKC 98
           C VA P C
Sbjct: 95  CNVAYPTC 102

[Close]

BLAST of ClCG01G009272.1 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12
Identity = 36/98 (36.73%), Postives = 48/98 (48.98%), Query Frame = 0


Query: 7  MKGMC-------LLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVK 66
          MKG C         +L++ +VA E ++     C   +L PCL       EPS  CC+KVK
Sbjct: 1  MKGSCTKPVFFTCTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVK 60

Query: 67 EQKQCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC 98
          EQ+ C C Y KNP  + +L     K I + C    PKC
Sbjct: 61 EQQHCICQYLKNPNFKSFLNSPNAKIIATDCHCPYPKC 98

[Close]

BLAST of ClCG01G009272.1 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12
Identity = 29/86 (33.72%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 12 LLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKN 71
          +L L  +++     + E V C   +L  C  A T S  PS ACC K++EQ+ C CGY +N
Sbjct: 9  VLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGYMRN 68

Query: 72 PKIQPYLQEDATKKIISQCGVATPKC 98
          P ++ Y+     +K+ + C + +P C
Sbjct: 69 PTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of ClCG01G009272.1 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 28 EAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKII 87
          EAV C   +L PC  A T S  PS+ CC K+KEQ+ C CGY +NP ++ ++     +K+ 
Sbjct: 27 EAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVS 86

Query: 88 SQCGVATPKC 98
            C +  P+C
Sbjct: 87 KSCKLPIPRC 96

[Close]

BLAST of ClCG01G009272.1 vs. TAIR 10
Match: AT2G14846.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 4.7e-11
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 0


Query: 28 EAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKII 87
          E V C   +LR CL A     +PS  CC K+KEQ  C CGY K P    Y+     +K++
Sbjct: 30 EKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVL 89

Query: 88 SQCGVATPKC 98
          + C +  PKC
Sbjct: 90 TACAIPIPKC 99

The following BLAST results are available for this feature:

BLAST of ClCG01G009272.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66906.1	1.5e-22	61.54	hypothetical protein Csa_006987 [Cucumis sativus]	[more]
XP_038904866.1	2.4e-17	47.37	non-specific lipid-transfer protein 2-like [Benincasa hispida]	[more]
KAE8648143.1	3.1e-17	48.19	hypothetical protein Csa_023893, partial [Cucumis sativus]	[more]
GAU46076.1	3.1e-17	47.31	hypothetical protein TSUD_180120 [Trifolium subterraneum]	[more]
XP_022759947.1	9.2e-17	46.32	non-specific lipid-transfer protein 2-like [Durio zibethinus]	[more]

BLAST of ClCG01G009272.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43681	1.2e-14	39.18	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P86809	1.7e-13	51.52	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P82353	1.7e-10	38.24	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
A2XBN5	1.2e-08	30.85	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q10ST8	2.1e-08	30.85	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of ClCG01G009272.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3W7	7.1e-23	61.54	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV...	[more]
A0A2Z6NR57	1.5e-17	47.31	AAI domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_180120 P...	[more]
A0A6P6A579	4.4e-17	46.32	non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC11...	[more]
A0A6P4QB35	7.6e-17	45.26	non-specific lipid-transfer protein 2 OS=Gossypium arboreum OX=29729 GN=LOC10848...	[more]
A0A2P5YU65	7.6e-17	45.26	AAI domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G05630...	[more]

BLAST of ClCG01G009272.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66850.1	7.7e-14	44.12	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	1.5e-12	36.73	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	1.5e-12	33.72	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G18280.1	1.5e-12	40.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G14846.1	4.7e-11	40.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 30..97 e-value: 6.8E-19 score: 69.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..97
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 13..95 e-value: 6.7E-6 score: 26.2
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 7..97
None	No IPR available	PANTHER	PTHR33214:SF55	NODULE CYSTEINE-RICH (NCR) SECRETED PEPTIDE	coord: 7..97

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG01G009272	ClCG01G009272	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G009272.1-exon	ClCG01G009272.1-exon-CG_Chr01:12619791..12620084	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G009272.1-cds	ClCG01G009272.1-cds-CG_Chr01:12619791..12620084	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG01G009272.1	ClCG01G009272.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport