ClCG01G009272 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGCTATTGTGGGTACGAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACAAAAAAAATTATATCTCAATGTGGGGTTGCCACCCCGAAATGCTAG ATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGCTATTGTGGGTACGAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACAAAAAAAATTATATCTCAATGTGGGGTTGCCACCCCGAAATGCTAG ATGAAGAAAGCTCTTTCAATGAAAGGCATGTGCCTTTTGGTGCTCGTGATGAGTGTGGTTGCCAATGAAACTCAACTTGTGGAGGCAGTGAAATGCGAGGCAAAAGAACTGAGGCCATGTCTTTTTGCGTACACAATGTCGGTGGAGCCATCGTCAGCTTGTTGCAACAAGGTGAAGGAGCAGAAGCAATGCTATTGTGGGTACGAGAAAAATCCAAAGATTCAACCCTATTTACAAGAGGATGCGACAAAAAAAATTATATCTCAATGTGGGGTTGCCACCCCGAAATGCTAG MKKALSMKGMCLLVLVMSVVANETQLVEAVKCEAKELRPCLFAYTMSVEPSSACCNKVKEQKQCYCGYEKNPKIQPYLQEDATKKIISQCGVATPKC Homology
BLAST of ClCG01G009272 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of ClCG01G009272 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 99.0 bits (245), Expect = 2.4e-17 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of ClCG01G009272 vs. NCBI nr
Match: KAE8648143.1 (hypothetical protein Csa_023893, partial [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of ClCG01G009272 vs. NCBI nr
Match: GAU46076.1 (hypothetical protein TSUD_180120 [Trifolium subterraneum]) HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of ClCG01G009272 vs. NCBI nr
Match: XP_022759947.1 (non-specific lipid-transfer protein 2-like [Durio zibethinus]) HSP 1 Score: 97.1 bits (240), Expect = 9.2e-17 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.2e-14 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10 Identity = 26/68 (38.24%), Postives = 37/68 (54.41%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08 Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 7.1e-23 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy TrEMBL
Match: A0A2Z6NR57 (AAI domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_180120 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy TrEMBL
Match: A0A6P6A579 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306314 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.4e-17 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy TrEMBL
Match: A0A6P4QB35 (non-specific lipid-transfer protein 2 OS=Gossypium arboreum OX=29729 GN=LOC108482197 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of ClCG01G009272 vs. ExPASy TrEMBL
Match: A0A2P5YU65 (AAI domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G056300v1 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of ClCG01G009272 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 7.7e-14 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of ClCG01G009272 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12 Identity = 36/98 (36.73%), Postives = 48/98 (48.98%), Query Frame = 0
BLAST of ClCG01G009272 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12 Identity = 29/86 (33.72%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of ClCG01G009272 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12 Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of ClCG01G009272 vs. TAIR 10
Match: AT2G14846.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-11 Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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