ClCG01G004410.2 (mRNA) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G004410.2
Type	mRNA
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Actin-depolymerizing factor
Location	CG_Chr01: 4688960 .. 4690613 (-)
Sequence length	642
RNA-Seq Expression	ClCG01G004410.2
Synteny	ClCG01G004410.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCATTCTTTTTTCTCCTCTATTTCTCTCTTTCTTCTTCCCTTTCCCTCTCCCATACTACAGCCTTTCTTTCTCCTTACTCCTCAAGAAAACATGGTATGTTGTTTCTCTCTATCTTTTCTATAATTTGTTTAATCATTACAAAACAATTTAGTCTCGGACCACTCTATTTCATAACCATTTCGATTACTTTTTAGTTTTACACTTTGAAACATCATGTGTCGTAGTTTCTTCACAATTTGTTATGATTGTCAAATGTCTTATCTTCTATATTTCATTTATGTAGTTTAATAATTAATAATTATCCAAAAATGTTATATTACTGTTGATTATAGGCGAACTCAGCATCTGGAATGGCTGTGAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAACTACAGATTCATCATTTTCAAGATTGAACAACAAGAAGTGGTGGTAGAGAAATTGGGAAAACCAGATGAAACATATGAGGATTTCACTGGATCTCTCCCTGCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCATTACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTACGCTACTCACTCTATCAATCCAATCCGAGCATAGCTCACTAATATAAGGCATCAAAATTACCAGTTCATAAAGGTTGATGGTTCGATCCCTTACACCCCACAACATTTGAGTTAAAAAACAATTTGGGAAATGGAGGATTTGAACCAACTCTAACTTTTTGGTCGAGGGTATAAGCCTAAACTAGGTTACAGATTGACCACAAATCGTTTAACCTAGAAATTGATTAACAATGCATTTGAATCTTGTTCGATAATTGTTTTTTACTCATTTTAGACACTGCCATTGTGAGTATAACTTAGTAGACACAAGACATCAAAATTACCACTATAAGGGTCATCAATGGTTCGATTCTTTATCCCCTATAACATTTGAGTTCAATAACAATTTGGAGTAGGGAGAATCAAACCAACTTTGACAATTTTTTCTTGAGGGTATATGCCTAAATTAGTTGAGTTATGCTCAAGTTGGCTACAAACCATTTAACCTAAAAAATCGATTAACCATATTCACCAATATAAGTGAATTTGAATCTTTTCTGATAGTTGTTTCTTACTCATTGTCAATCTAAGCATAGCTTTGGTTTGATCCTCCACACCCCCGCAACATTTAAGTTCAACAACAAATTGGAGTAGGGAGAGTTTAACGTAGAAATCGATTAGTTGTATATTGAGTAACATATGTGCATTCAAAATATTTTTGGATAGTTGTTTTTGTTAGTGGTTTTATTTTGATAACATCTTTATCTAAATGATGGTATGTTGAGAAATAGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAACTAGATGGAATTCAATTTGAGTTGCAAGCAACAGATCCAAGTGAGATGAGCTTTGACATTGTCAAGGCACGTGCATTCTAGATGCCACAAAAATAAACACAAAATCCTATCCCCTTCTTTGTTTTTGCTCTAAATTAATGTGTTTTGTTCCTCTATATCTCAACAAAACTACACATTTTATAGAGAAGCTTTTGTAATTTTTTTTTAATATCTAT

mRNA sequence

TCTCCATTCTTTTTTCTCCTCTATTTCTCTCTTTCTTCTTCCCTTTCCCTCTCCCATACTACAGCCTTTCTTTCTCCTTACTCCTCAAGAAAACATGGCGAACTCAGCATCTGGAATGGCTGTGAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAACTACAGATTCATCATTTTCAAGATTGAACAACAAGAAGTGGTGGTAGAGAAATTGGGAAAACCAGATGAAACATATGAGGATTTCACTGGATCTCTCCCTGCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCATTACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAACTAGATGGAATTCAATTTGAGTTGCAAGCAACAGATCCAAGTGAGATGAGCTTTGACATTGTCAAGGCACGTGCATTCTAGATGCCACAAAAATAAACACAAAATCCTATCCCCTTCTTTGTTTTTGCTCTAAATTAATGTGTTTTGTTCCTCTATATCTCAACAAAACTACACATTTTATAGAGAAGCTTTTGTAATTTTTTTTTAATATCTAT

Coding sequence (CDS)

ATGGCGAACTCAGCATCTGGAATGGCTGTGAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAACTACAGATTCATCATTTTCAAGATTGAACAACAAGAAGTGGTGGTAGAGAAATTGGGAAAACCAGATGAAACATATGAGGATTTCACTGGATCTCTCCCTGCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCATTACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAACTAGATGGAATTCAATTTGAGTTGCAAGCAACAGATCCAAGTGAGATGAGCTTTGACATTGTCAAGGCACGTGCATTCTAG

Protein sequence

MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

Homology

[Close]

BLAST of ClCG01G004410.2 vs. NCBI nr
Match: XP_008437023.1 (PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depolymerizing factor 7 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLG+PDETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. NCBI nr
Match: XP_004152385.2 (actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein Csa_000362 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLG+PDETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. NCBI nr
Match: XP_022995817.1 (actin-depolymerizing factor 7 [Cucurbita maxima] >XP_023534281.1 actin-depolymerizing factor 7 [Cucurbita pepo subsp. pepo] >KAG6605728.1 Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MANSASGM VRDECKLKFLELKAKRNYRFIIFKIEQQE+VVEKLGKP+ETYEDFTGSLPA
Sbjct: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. NCBI nr
Match: XP_022958404.1 (actin-depolymerizing factor 7 [Cucurbita moschata])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 130/137 (94.89%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MANSASGM VRDECKLKFLELKAKRNYRFIIFKIEQQ++VVEKLGKP+ETYEDFTGSLPA
Sbjct: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQDIVVEKLGKPEETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. NCBI nr
Match: XP_022159651.1 (actin-depolymerizing factor 7 [Momordica charantia])

HSP 1 Score: 265.0 bits (676), Expect = 3.6e-67
Identity = 131/137 (95.62%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLGKP+ETYEDFTGSLP+
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPS 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-64
Identity = 119/136 (87.50%), Postives = 129/136 (94.85%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG PDETY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.5e-60
Identity = 111/139 (79.86%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQ--QEVVVEKLGKPDETYEDFTGSL 60
           MANS+SGMAV DECKLKF+ELKAKRN+RFI+FKIE+  Q+V VE+LG+P+E+Y+DFT  L
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P +ECRYAVFDFDF+TDENCQKSKIFFI+WSPD S+VRSKM+YAS+KDRFKRELDGIQ E
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKARAF 138
           LQATDPSEMS DI+KARAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy Swiss-Prot
Match: Q6EUH7 (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.9e-59
Identity = 111/138 (80.43%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQ--QEVVVEKLGKPDETYEDFTGSL 60
           M+NSASGMAV DECKLKFLELKAKR++RFI+FKI +  Q+VVV++LG+P E+Y+DFT  L
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PADECRYAVFDFDF+TDENCQKSKIFFI+W+PD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKARA 137
           LQATDPSEMS DIVK+RA
Sbjct: 121 LQATDPSEMSMDIVKSRA 138

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 2.9e-59
Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQ--QEVVVEKLGKPDETYEDFTGSL 60
           MANSASGMAV DECKLKF ELK+KR++RFI FKI++  Q+VVV++LG+P +TY+DFT S+
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PA ECRYAVFDFDF+TDENCQKSKIFFI+WSPD SKVRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKARA 137
           LQATDPSEMS DIVKARA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.4e-59
Identity = 110/137 (80.29%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQ--QEVVVEKLGKPDETYEDFTGSL 60
           MANSASGM V DECKLKFLELKAKRNYRFI+FKI++  Q+V+++KLG P+ETYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy TrEMBL
Match: A0A5A7TKY7 (Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00280 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.3e-70
Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLG+PDETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy TrEMBL
Match: A0A1S3ATL2 (actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.3e-70
Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLG+PDETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy TrEMBL
Match: A0A0A0KKY8 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLG+PDETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy TrEMBL
Match: A0A6J1K020 (actin-depolymerizing factor 7 OS=Cucurbita maxima OX=3661 GN=LOC111491240 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MANSASGM VRDECKLKFLELKAKRNYRFIIFKIEQQE+VVEKLGKP+ETYEDFTGSLPA
Sbjct: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. ExPASy TrEMBL
Match: A0A6J1H503 (actin-depolymerizing factor 7 OS=Cucurbita moschata OX=3662 GN=LOC111459638 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 130/137 (94.89%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MANSASGM VRDECKLKFLELKAKRNYRFIIFKIEQQ++VVEKLGKP+ETYEDFTGSLPA
Sbjct: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQDIVVEKLGKPEETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of ClCG01G004410.2 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-65
Identity = 119/136 (87.50%), Postives = 129/136 (94.85%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG PDETY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of ClCG01G004410.2 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 228.0 bits (580), Expect = 4.5e-60
Identity = 110/137 (80.29%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQ--QEVVVEKLGKPDETYEDFTGSL 60
           MANSASGM V DECKLKFLELKAKRNYRFI+FKI++  Q+V+++KLG P+ETYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of ClCG01G004410.2 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-59
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGKPDETYEDFTGSLPA 60
           MAN+ASGMAV DECKLKFLELKAKRNYRFIIF+I+ Q+VVVEKLG P E Y+DFT  LP 
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAV+DFDF T EN QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMS DI+K+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of ClCG01G004410.2 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-58
Identity = 106/137 (77.37%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIEQ--QEVVVEKLGKPDETYEDFTGSL 60
           MANSASGM V DECK+KFLELKAKR YRFI+FKI++  Q+V +EKLG P+ETY+DFT S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+DFDF T++NCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRE++GIQ E
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of ClCG01G004410.2 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-57
Identity = 103/137 (75.18%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MANSASGMAVRDECKLKFLELKAKRNYRFIIFKIE--QQEVVVEKLGKPDETYEDFTGSL 60
           MAN+ASGMAV D+CKL+FLELKAKR +RFI++KIE  Q++V+VEK+G+P  TYEDF  SL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PADECRYA++DFDF+T ENCQKSKIFFIAW PD++KVRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDP+EM  D++K+R
Sbjct: 121 LQATDPTEMDLDVLKSR 137

The following BLAST results are available for this feature:

BLAST of ClCG01G004410.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437023.1	1.7e-69	98.54	PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depo...	[more]
XP_004152385.2	2.2e-69	98.54	actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein...	[more]
XP_022995817.1	1.2e-67	95.62	actin-depolymerizing factor 7 [Cucurbita maxima] >XP_023534281.1 actin-depolymer...	[more]
XP_022958404.1	2.7e-67	94.89	actin-depolymerizing factor 7 [Cucurbita moschata]	[more]
XP_022159651.1	3.6e-67	95.62	actin-depolymerizing factor 7 [Momordica charantia]	[more]

BLAST of ClCG01G004410.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM4	3.0e-64	87.50	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1	[more]
P30175	7.5e-60	79.86	Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q6EUH7	2.9e-59	80.43	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 P...	[more]
Q7XSN9	2.9e-59	81.16	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P...	[more]
Q9LQ81	6.4e-59	80.29	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]

BLAST of ClCG01G004410.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKY7	8.3e-70	98.54	Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3ATL2	8.3e-70	98.54	actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1	[more]
A0A0A0KKY8	1.1e-69	98.54	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 ...	[more]
A0A6J1K020	6.0e-68	95.62	actin-depolymerizing factor 7 OS=Cucurbita maxima OX=3661 GN=LOC111491240 PE=3 S...	[more]
A0A6J1H503	1.3e-67	94.89	actin-depolymerizing factor 7 OS=Cucurbita moschata OX=3662 GN=LOC111459638 PE=3...	[more]

BLAST of ClCG01G004410.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25590.1	2.1e-65	87.50	actin depolymerizing factor 7	[more]
AT1G01750.1	4.5e-60	80.29	actin depolymerizing factor 11	[more]
AT5G52360.1	1.7e-59	81.62	actin depolymerizing factor 10	[more]
AT4G00680.1	1.1e-58	77.37	actin depolymerizing factor 8	[more]
AT5G59890.1	1.6e-57	75.18	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..137 e-value: 2.4E-55 score: 199.8
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..134 e-value: 1.4E-35 score: 121.8
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..137 score: 35.633911
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..136 e-value: 5.4E-51 score: 174.5
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 2..137
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..135
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 2..137
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..136 e-value: 3.29342E-61 score: 182.371

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG01G004410	ClCG01G004410	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G004410.2-exon	ClCG01G004410.2-exon-CG_Chr01:4688960..4689244	exon
ClCG01G004410.2-exon	ClCG01G004410.2-exon-CG_Chr01:4690018..4690277	exon
ClCG01G004410.2-exon	ClCG01G004410.2-exon-CG_Chr01:4690517..4690613	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G004410.2-three_prime_utr	ClCG01G004410.2-three_prime_utr-CG_Chr01:4688960..4689093	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G004410.2-cds	ClCG01G004410.2-cds-CG_Chr01:4689094..4689244	CDS
ClCG01G004410.2-cds	ClCG01G004410.2-cds-CG_Chr01:4690018..4690277	CDS
ClCG01G004410.2-cds	ClCG01G004410.2-cds-CG_Chr01:4690517..4690519	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG01G004410.2-five_prime_utr	ClCG01G004410.2-five_prime_utr-CG_Chr01:4690520..4690613	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG01G004410.2	ClCG01G004410.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003779	actin binding
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding