Chy6G119480.1 (mRNA) Cucumber (hystrix) v1

Overview


Name	Chy6G119480.1
Type	mRNA
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Homeobox Hox-B3-like protein
Location	chrH06: 14981202 .. 14981816 (-)
Sequence length	615
RNA-Seq Expression	Chy6G119480.1
Synteny	Chy6G119480.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACAAATTCCACCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAAAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTATGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCATGAGGAATACCCGGAGAAGTCCACCCCGCCGGCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACTCCTCCGGGGAAGACGTGGGGGAAGAATACTGGGGGATTGTCGACGAATTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACTGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGTTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

mRNA sequence

ATGGCCGACAAATTCCACCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAAAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTATGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCATGAGGAATACCCGGAGAAGTCCACCCCGCCGGCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACTCCTCCGGGGAAGACGTGGGGGAAGAATACTGGGGGATTGTCGACGAATTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACTGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGTTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

Coding sequence (CDS)

ATGGCCGACAAATTCCACCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAAAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTATGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCATGAGGAATACCCGGAGAAGTCCACCCCGCCGGCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACTCCTCCGGGGAAGACGTGGGGGAAGAATACTGGGGGATTGTCGACGAATTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACTGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGTTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

Protein sequence

MADKFHHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAINGENRKGGRRGKTVLGVRQI*

Homology

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BLAST of Chy6G119480.1 vs. ExPASy TrEMBL
Match: A0A0A0L9P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.2e-102
Identity = 197/204 (96.57%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MADKFHHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60
           MA KF HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL
Sbjct: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60

Query: 61  RNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120
           RNAMYRH+E+PEKSTPP KKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML
Sbjct: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120

Query: 121 SPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180
           SPVMEMTPPGKTWGKN GGLST SRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA
Sbjct: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180

Query: 181 ANAINGENRKGGRRGKTVLGVRQI 205
           ANAINGENRKGGRRGKTVLGVRQI
Sbjct: 181 ANAINGENRKGGRRGKTVLGVRQI 204

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BLAST of Chy6G119480.1 vs. ExPASy TrEMBL
Match: A0A5A7U2K6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001060 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MADKFHHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MADKFHHLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRH+E+PEKSTPP KKQ+KFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN GGLSTNSRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGENRKGGRRGKTVLGVRQI 205
            A AINGENRKGGR+GKTVLG RQ+
Sbjct: 181 TAKAINGENRKGGRKGKTVLGSRQV 205

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BLAST of Chy6G119480.1 vs. ExPASy TrEMBL
Match: A0A1S3CEQ6 (uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 9.8e-91
Identity = 176/188 (93.62%), Postives = 181/188 (96.28%), Query Frame = 0


Query: 1   MADKFHHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MADKFHHLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRH+E+PEKSTPP KKQ+KFLGSETVRKR+ATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRTATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN GGLSTNSRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGE 188
            A AINGE
Sbjct: 181 TAKAINGE 188

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BLAST of Chy6G119480.1 vs. ExPASy TrEMBL
Match: A0A6J1KFU5 (uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.8e-84
Identity = 176/211 (83.41%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MADKFH-----HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRE 60
           MAD F      HLPFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKP 120
           SKLRLRN+MYR  E PEKSTPPAKKQV+F+GSETVRKRSATVAQSVPDFS+VLRKEN++P
Sbjct: 61  SKLRLRNSMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRP 120

Query: 121 PPGMLSPVMEMTPPGKTWGKNT-GGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELK 180
           PPG LSPVMEMTPPGKTWGKN  GG+S NSRGSKSASAGEKRGGGL A RKSYAGFEELK
Sbjct: 121 PPG-LSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENRK-GGRRGKTVLGVRQI 205
           GFSTAAANAINGEN++ GGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGRRGKTVLGVRQI 210

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BLAST of Chy6G119480.1 vs. ExPASy TrEMBL
Match: A0A6J1GA97 (uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC111452204 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.8e-84
Identity = 178/212 (83.96%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MADKFH-----HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRE 60
           MAD F      HL FHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKP 120
           SKLRLRNAMYR  E PEKSTPPAKKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+P
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGMLSPVMEMTPPGKTWGKNT-GGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELK 180
           PPG LSPVMEMTPPGKTWGKN  GG+S NSRGSKSASAGEKRGGGL A RKSYAGFEELK
Sbjct: 121 PPG-LSPVMEMTPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENRK--GGRRGKTVLGVRQI 205
           GFSTAAANAINGEN++  GGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

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BLAST of Chy6G119480.1 vs. NCBI nr
Match: XP_011651352.1 (uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hypothetical protein Csa_011028 [Cucumis sativus])

HSP 1 Score: 380 bits (977), Expect = 1.09e-132
Identity = 197/204 (96.57%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MADKFHHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60
           MA KF HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL
Sbjct: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60

Query: 61  RNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120
           RNAMYRH+E+PEKSTPP KKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML
Sbjct: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120

Query: 121 SPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180
           SPVMEMTPPGKTWGKN GGLST SRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA
Sbjct: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180

Query: 181 ANAINGENRKGGRRGKTVLGVRQI 204
           ANAINGENRKGGRRGKTVLGVRQI
Sbjct: 181 ANAINGENRKGGRRGKTVLGVRQI 204

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BLAST of Chy6G119480.1 vs. NCBI nr
Match: KAA0048497.1 (uncharacterized protein E6C27_scaffold61G001100 [Cucumis melo var. makuwa] >TYK28289.1 uncharacterized protein E5676_scaffold600G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 372 bits (956), Expect = 1.80e-129
Identity = 191/205 (93.17%), Postives = 197/205 (96.10%), Query Frame = 0


Query: 1   MADKFHHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MADKFHHLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRH+E+PEKSTPP KKQ+KFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN GGLSTNSRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGENRKGGRRGKTVLGVRQI 204
            A AINGENRKGGR+GKTVLG RQ+
Sbjct: 181 TAKAINGENRKGGRKGKTVLGSRQV 205

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BLAST of Chy6G119480.1 vs. NCBI nr
Match: XP_008461547.1 (PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo])

HSP 1 Score: 343 bits (879), Expect = 5.56e-118
Identity = 176/188 (93.62%), Postives = 181/188 (96.28%), Query Frame = 0


Query: 1   MADKFHHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MADKFHHLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRH+E+PEKSTPP KKQ+KFLGSETVRKR+ATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRTATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN GGLSTNSRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGE 187
            A AINGE
Sbjct: 181 TAKAINGE 188

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BLAST of Chy6G119480.1 vs. NCBI nr
Match: XP_038903179.1 (uncharacterized protein LOC120089840 [Benincasa hispida])

HSP 1 Score: 342 bits (877), Expect = 2.35e-117
Identity = 187/211 (88.63%), Postives = 192/211 (91.00%), Query Frame = 0


Query: 1   MADKFHHL-----PFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRE 60
           MADKF+HL     PFHSID RSLLLHQNSAAD PISL LT EPFSMERGPRYRAYAELRE
Sbjct: 1   MADKFNHLAQTHLPFHSIDPRSLLLHQNSAADLPISLQLTAEPFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKP 120
           SKLRLRNAMYR  E PEKSTPPAKKQVKFL SET+RKRSA VAQSVPDFSAVLRKENRKP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVKFLDSETLRKRSAAVAQSVPDFSAVLRKENRKP 120

Query: 121 PPGMLSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKG 180
           PPG LSPVMEMTPPGKTWGK  GGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEE+KG
Sbjct: 121 PPG-LSPVMEMTPPGKTWGKKIGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEEMKG 180

Query: 181 FSTAAANAINGENRKGG--RRGKTVLGVRQI 204
           FSTAAANAINGENR+GG  RRGKTVLG+RQI
Sbjct: 181 FSTAAANAINGENRRGGGGRRGKTVLGIRQI 210

[Close]

BLAST of Chy6G119480.1 vs. NCBI nr
Match: XP_023524771.1 (uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323 bits (827), Expect = 1.04e-109
Identity = 179/213 (84.04%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MADKFHHL-----PFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRE 60
           MAD F HL     PFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRHEEYPEKSTPPAKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKP 120
           SKLRLRNAMYR  E PEKSTPPAKKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+P
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGMLSPVMEMTPPGKTWGKNT--GGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEEL 180
           PPG LSPVMEMTPPGKTWGKN   GG+S NSRGSKSASAGEKRGGGL A RKSYAGFEEL
Sbjct: 121 PPG-LSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEEL 180

Query: 181 KGFSTAAANAINGENRKGG--RRGKTVLGVRQI 204
           KGFSTAAANAINGEN++GG  RRGKTVLGVRQI
Sbjct: 181 KGFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212

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BLAST of Chy6G119480.1 vs. TAIR 10
Match: AT5G38300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 103/257 (40.08%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 10  FHSIDSRSLLLHQNSAADHPISLHLTPEPFS-MERGPRYRAYAELRESKLRLRNAMYRH- 69
           F S+D  SL+L QNS   H + L L  + FS  ERGPRY  Y+ LRESKLR++    +  
Sbjct: 14  FFSVDPMSLILSQNSDT-HQLKLLL--DGFSGFERGPRYDEYSRLRESKLRMKRDFQKFL 73

Query: 70  EEYPEKSTPPAKKQVKFLGS----------------------------------ETVRKR 129
           EE  E   P  KKQV+F G+                                  E V+K+
Sbjct: 74  EEEDEVEEPRIKKQVRFEGNSVNSQEGDKFSPEKKKQSRFEGISVISQEDRFSPEKVKKQ 133

Query: 130 S------------ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNTGGLS 189
           S            +++AQSVPDFSAV+RKENR+P       +  +TPP  T     GG+ 
Sbjct: 134 SRFGFSPLKKAVPSSLAQSVPDFSAVIRKENRRP-----VNINTITPPPPTSKSRNGGVL 193

Query: 190 TN--SRGSKSASAGEKRGGGLTAV---RKSYAGFEELKGFSTAAANAINGENRKGGRRGK 205
           T   SRGSKSASAGEK+  G+  +   RKSYA  E+LK  S AAA+AING    GG   K
Sbjct: 194 TGSASRGSKSASAGEKKSKGMMMMGMARKSYANVEDLKKISMAAASAINGGGGGGGGGRK 253

[Close]

BLAST of Chy6G119480.1 vs. TAIR 10
Match: AT1G67035.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1). )

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-20
Identity = 87/221 (39.37%), Postives = 113/221 (51.13%), Query Frame = 0


Query: 17  SLLLHQNSAADHPISLHLTPE--PFSMERGPRYRAYAELRESKLRL-------------R 76
           SLL   N  +D    L L  +   +  ERG RY  YA LRESKLR+             R
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 77  NAMYRHEEYPEKSTPPAKKQVKFLGSE--TVRKRSATVAQSVPDFSAVLRKENRKPP--P 136
               R EE   +  P  K +  F  ++  T    S+++AQSVPDFS+++RKENR+PP   
Sbjct: 72  FGFTREEEI--RVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNS 131

Query: 137 GMLSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFS 196
            +L    E+TPP            +  RGS SASAGEK+G G+  +RKSYA  ++LK  S
Sbjct: 132 NLLPRRTELTPPSMKSRNAAVFAGSVIRGSVSASAGEKKGIGM--MRKSYAAVDDLKKIS 191

Query: 197 TAAANAINGENRK--------------GGRRGKTVLGVRQI 205
            AAA+AING   K              GG  G+T+LG RQI
Sbjct: 192 MAAASAINGGGGKRRSIGGGGGRKSLGGGGGGRTILGYRQI 228

[Close]

BLAST of Chy6G119480.1 vs. TAIR 10
Match: AT1G67035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 74/207 (35.75%), Postives = 95/207 (45.89%), Query Frame = 0


Query: 17  SLLLHQNSAADHPISLHLTPE--PFSMERGPRYRAYAELRESKLRL-------------R 76
           SLL   N  +D    L L  +   +  ERG RY  YA LRESKLR+             R
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 77  NAMYRHEEYPEKSTPPAKKQVKFLGSE--TVRKRSATVAQSVPDFSAVLRKENRKPP--P 136
               R EE   +  P  K +  F  ++  T    S+++AQSVPDFS+++RKENR+PP   
Sbjct: 72  FGFTREEEI--RVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNS 131

Query: 137 GMLSPVMEMTPPGKTWGKNTGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFS 196
            +L    E+TPP            +  RGS SASAGEK+GG     RKS           
Sbjct: 132 NLLPRRTELTPPSMKSRNAAVFAGSVIRGSVSASAGEKKGG-----RKSLG--------- 189

Query: 197 TAAANAINGENRKGGRRGKTVLGVRQI 205
                        GG  G+T+LG RQI
Sbjct: 192 -------------GGGGGRTILGYRQI 189

The following BLAST results are available for this feature:

BLAST of Chy6G119480.1 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G119480.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9P8	4.2e-102	96.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1	[more]
A0A5A7U2K6	1.2e-99	93.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEQ6	9.8e-91	93.62	uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=...	[more]
A0A6J1KFU5	6.8e-84	83.41	uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844...	[more]
A0A6J1GA97	6.8e-84	83.96	uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]

BLAST of Chy6G119480.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651352.1	1.09e-132	96.57	uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hypothetical ...	[more]
KAA0048497.1	1.80e-129	93.17	uncharacterized protein E6C27_scaffold61G001100 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008461547.1	5.56e-118	93.62	PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo]	[more]
XP_038903179.1	2.35e-117	88.63	uncharacterized protein LOC120089840 [Benincasa hispida]	[more]
XP_023524771.1	1.04e-109	84.04	uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy6G119480.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38300.1	1.2e-24	40.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.2	3.1e-20	39.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.1	1.4e-12	35.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..159
None	No IPR available	PANTHER	PTHR37708:SF2	SUBFAMILY NOT NAMED	coord: 9..203
None	No IPR available	PANTHER	PTHR37708	FAMILY NOT NAMED	coord: 9..203

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Chy6G119480	Chy6G119480	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy6G119480.1.exon1	Chy6G119480.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Chy6G119480.1.cds1	Chy6G119480.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Chy6G119480.1	Chy6G119480.1-protein	polypeptide