CcUC11G209880.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC11G209880.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Nuclear transcription factor Y subunit
Location	CicolChr11: 1831198 .. 1833473 (+)
Sequence length	1044
RNA-Seq Expression	CcUC11G209880.1
Synteny	CcUC11G209880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAGATTTGTTGGTGAATATGATGGCCATCCCACTCGAGAACTTTTCCCAGAAACATCTTGATCAGGACCCTGTTCATTCAGTATTTCCATTTTCTGTTGATTGTACAACGTGGCGAAACTCAAACGAAAAGAAGATGACAATGGCTTTGTCTGATAATATTAGTCTAAAACTTGAAACTCCCCCAAAACCTCATCACAAGCAATTAGAGGTAGGTCTTCAGTTACCAGATCAGGAGTCATCCACAGCCCACTCAATTGGTCAATCTCTACATAAAGTGTGTGCTATGGAAGTGCAAAATGCTCAAGAGCAATGTATTTCTTCAGAATCTGGTACTTGCATGCTTAGGTTCCTCGGTTTATTTACTTCCCATTCTACATTTGTTCGATTAGTAGTAGTGTGGCTGACCCCGACACAGATAACAATCAGTTCAAATTATTTGAATTACTCAAATTTGTTCTATTCTGTTTCTACTGTTGCCAAAGGATATTAAACTGGCTAAGGATGTTTCCTGTAGTAAAAGTTGTTCCGCACTCATTTATTGTTATTCTTTATGTTTTCAGTGTCTTGGATGCGTTTTAGGCTATCTAACCATAAGTAGTTCTTCCTGCTTCAGGTCAAGATGAAAACTGTGGCGAGAGTGTGGAGAATCAGATGAAACCGGCTATTTTGTTTAGCAACCCTGAATTTATGTTCAATTCTCTCCAAGTCGATGGCAGCCATTCAATGGTAGGTTGAATCGTGTTATTTGATTTCTGTTTCTTATCGTTGCTAGGCTAATTTCTCTCATTATTTTAGACTCGAGTATCATACCCGTACATTGATCCTTACTATGGTGGCCTATTGTGCGGTGGCTACAGTCAGCAGGGTTTTAATGTAAGTTTCGTTGGTCCTCTTGTTTCTTCCTCATCTTTTGAACTTTTACATTGTTAATCCAATTAGTATGGAGCTGTCTGAAATTACCTCTACATTTTATCTTCATTTATTTGGTTCTTGTTTGATGTCAATGATATGATTCTCATCAGAGTCAAGCTCAAGTAAATCCCAATGCTGTTGGGACTGCACCTGCAAGAGTCCCCATATCGCATGGTCTTGCTGAAGATGGGCCCATCTATGTCAATGCAAAACAATACCATGGAATTCTTAGGAGGAGGCAGTCTCGTGCAAAGCTTGAGGCTCAAAACAAAGTCATAAGAAATCGGAAGGTATCGATTTTGAATTTGATTTTTTTTTTCAGTTGATTTTGAACACTTCCCATTAATAATGAATCGGATGAAATCATCGAGAGTTAATTATGTTTGGATGAGAAGAACTCGGGAACTTAAAGCAAGCTTATTAAGACCCAAGTCATTTCAAATATGTCCTAAATTTGAAAAAGAGTGAACCTGCAAGCTTATTAAGACCCATCTGCAAGCTTTACTAAGTTTGAAAAAGAATGAGAATGTTTCCACGAGTTTTAACGTAAATGTATTATTGGTTTTAATCTACGTTGGCCACTCACCTAAAGTGTTAAATATATAAAATTCTATACGATCATGTGGTTGATATGTGGCTTTATCACACGTCACTTAAAAAAAAAGAAGTTGTGCTTGCTTGTATTTCAATTGAGTATTCATGTTGCACTCATCTTCTTGCAGCCTCATGTAATAGATGAAACAAATTTAAAATATTGAGAAGAAAAAAAAAAGTTAGCCATGTGACAAACTGTGAATCTGTAATTGGTCTATTGGTTGGGTTGCACAAAGATAAGTGTGTTCGAGATGCACTCAAGTATTTTTCGTTTCAATATATGATTGTCATCTACCTTGTTTTCGTTTCATGTTTAATAGCAACAGCACACCTATACCAGACAAGCTTGTCAATTTGTTCCTTTAACTTTTCTATTAGACAATGATATCATTTCACATTTACACACCAATTCTCCCTTCATTGCAGCCATATCTTCATGAGTCTCGACATCTCCATGCACTAAACAGAGTGAGGGGATCCGGCGGACGCTTTCTCAGTGTGAAAAAGAACCAACCATCTGATCGTACAAATCCTCTGACCACATTGTGCCAACAGAAAAGTACACCAGACTCGAATACTTATAGCCCTGAAACAGGTGACCATGGCACCATGACTGCAACTTGCTCCGAGATCACAAGCATCTCTAATGGATCAGTTATGTTCGGGTGGTCTGACAGTCAGTTCTCCGCCGCCTCTTCTAATGCGGGTGGGAGAATGGAGCAGTATCGCGGACGCTATGTACATGGCAGAAACGGAACATAG

mRNA sequence

ATGGTTTCAGATTTGTTGGTGAATATGATGGCCATCCCACTCGAGAACTTTTCCCAGAAACATCTTGATCAGGACCCTGTTCATTCAGTATTTCCATTTTCTGTTGATTGTACAACGTGGCGAAACTCAAACGAAAAGAAGATGACAATGGCTTTGTCTGATAATATTAGTCTAAAACTTGAAACTCCCCCAAAACCTCATCACAAGCAATTAGAGGTAGGTCTTCAGTTACCAGATCAGGAGTCATCCACAGCCCACTCAATTGGTCAATCTCTACATAAAGTGTGTGCTATGGAAGTGCAAAATGCTCAAGAGCAATGTATTTCTTCAGAATCTGGTCAAGATGAAAACTGTGGCGAGAGTGTGGAGAATCAGATGAAACCGGCTATTTTGTTTAGCAACCCTGAATTTATGTTCAATTCTCTCCAAGTCGATGGCAGCCATTCAATGACTCGAGTATCATACCCGTACATTGATCCTTACTATGGTGGCCTATTGTGCGGTGGCTACAGTCAGCAGGGTTTTAATAGTCAAGCTCAAGTAAATCCCAATGCTGTTGGGACTGCACCTGCAAGAGTCCCCATATCGCATGGTCTTGCTGAAGATGGGCCCATCTATGTCAATGCAAAACAATACCATGGAATTCTTAGGAGGAGGCAGTCTCGTGCAAAGCTTGAGGCTCAAAACAAAGTCATAAGAAATCGGAAGCCATATCTTCATGAGTCTCGACATCTCCATGCACTAAACAGAGTGAGGGGATCCGGCGGACGCTTTCTCAGTGTGAAAAAGAACCAACCATCTGATCGTACAAATCCTCTGACCACATTGTGCCAACAGAAAAGTACACCAGACTCGAATACTTATAGCCCTGAAACAGGTGACCATGGCACCATGACTGCAACTTGCTCCGAGATCACAAGCATCTCTAATGGATCAGTTATGTTCGGGTGGTCTGACAGTCAGTTCTCCGCCGCCTCTTCTAATGCGGGTGGGAGAATGGAGCAGTATCGCGGACGCTATGTACATGGCAGAAACGGAACATAG

Coding sequence (CDS)

ATGGTTTCAGATTTGTTGGTGAATATGATGGCCATCCCACTCGAGAACTTTTCCCAGAAACATCTTGATCAGGACCCTGTTCATTCAGTATTTCCATTTTCTGTTGATTGTACAACGTGGCGAAACTCAAACGAAAAGAAGATGACAATGGCTTTGTCTGATAATATTAGTCTAAAACTTGAAACTCCCCCAAAACCTCATCACAAGCAATTAGAGGTAGGTCTTCAGTTACCAGATCAGGAGTCATCCACAGCCCACTCAATTGGTCAATCTCTACATAAAGTGTGTGCTATGGAAGTGCAAAATGCTCAAGAGCAATGTATTTCTTCAGAATCTGGTCAAGATGAAAACTGTGGCGAGAGTGTGGAGAATCAGATGAAACCGGCTATTTTGTTTAGCAACCCTGAATTTATGTTCAATTCTCTCCAAGTCGATGGCAGCCATTCAATGACTCGAGTATCATACCCGTACATTGATCCTTACTATGGTGGCCTATTGTGCGGTGGCTACAGTCAGCAGGGTTTTAATAGTCAAGCTCAAGTAAATCCCAATGCTGTTGGGACTGCACCTGCAAGAGTCCCCATATCGCATGGTCTTGCTGAAGATGGGCCCATCTATGTCAATGCAAAACAATACCATGGAATTCTTAGGAGGAGGCAGTCTCGTGCAAAGCTTGAGGCTCAAAACAAAGTCATAAGAAATCGGAAGCCATATCTTCATGAGTCTCGACATCTCCATGCACTAAACAGAGTGAGGGGATCCGGCGGACGCTTTCTCAGTGTGAAAAAGAACCAACCATCTGATCGTACAAATCCTCTGACCACATTGTGCCAACAGAAAAGTACACCAGACTCGAATACTTATAGCCCTGAAACAGGTGACCATGGCACCATGACTGCAACTTGCTCCGAGATCACAAGCATCTCTAATGGATCAGTTATGTTCGGGTGGTCTGACAGTCAGTTCTCCGCCGCCTCTTCTAATGCGGGTGGGAGAATGGAGCAGTATCGCGGACGCTATGTACATGGCAGAAACGGAACATAG

Protein sequence

MVSDLLVNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCSEITSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHGRNGT

Homology

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BLAST of CcUC11G209880.1 vs. NCBI nr
Match: XP_038890752.1 (nuclear transcription factor Y subunit A-4-like isoform X1 [Benincasa hispida] >XP_038890754.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Benincasa hispida] >XP_038890755.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 592.0 bits (1525), Expect = 3.2e-165
Identity = 299/337 (88.72%), Postives = 309/337 (91.69%), Query Frame = 0


Query: 7   VNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKP 66
           +N MAIPLENFSQK+LDQD +HSVFPFSVDCT WRN NEKK+TMALSDNI+LKLETPP+P
Sbjct: 1   MNTMAIPLENFSQKNLDQDSIHSVFPFSVDCTPWRNPNEKKITMALSDNITLKLETPPQP 60

Query: 67  HHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQM 126
           HHK L VGLQLPDQESSTAHSIGQSL KVCAMEVQNAQEQCISSESGQDENCGESVENQM
Sbjct: 61  HHKLLGVGLQLPDQESSTAHSIGQSLPKVCAMEVQNAQEQCISSESGQDENCGESVENQM 120

Query: 127 KPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAV 186
           KP+ILFSNPEFM NSLQVDGSH MTRVSYPYIDPYY GLLC  YSQQ  N+QAQVN +AV
Sbjct: 121 KPSILFSNPEFMLNSLQVDGSHPMTRVSYPYIDPYYSGLLCSAYSQQAINTQAQVNSSAV 180

Query: 187 GTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 246
           G APARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH
Sbjct: 181 GIAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 240

Query: 247 ALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCSEIT 306
           ALNRVRGSGGRFLSVKKNQPSD   P  TL QQKSTPD NT SPETGD GTMTATCSEIT
Sbjct: 241 ALNRVRGSGGRFLSVKKNQPSDHITPPATLYQQKSTPDFNTCSPETGDRGTMTATCSEIT 300

Query: 307 SISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           SISNGSVMFG SDSQFS  SSNAGGRMEQYRGR+VHG
Sbjct: 301 SISNGSVMFGRSDSQFSTVSSNAGGRMEQYRGRFVHG 337

[Close]

BLAST of CcUC11G209880.1 vs. NCBI nr
Match: XP_038890756.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 584.3 bits (1505), Expect = 6.8e-163
Identity = 298/337 (88.43%), Postives = 307/337 (91.10%), Query Frame = 0


Query: 7   VNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKP 66
           +N MAIPLENFSQK+LDQD +HSVFPFSVDCT WRN NEKK+TMALSDNI+LKLETPP+P
Sbjct: 1   MNTMAIPLENFSQKNLDQDSIHSVFPFSVDCTPWRNPNEKKITMALSDNITLKLETPPQP 60

Query: 67  HHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQM 126
           HHK L VGLQLPDQESSTAHSIGQSL KVCAMEVQNAQEQCISSESGQDENCGESVENQM
Sbjct: 61  HHKLLGVGLQLPDQESSTAHSIGQSLPKVCAMEVQNAQEQCISSESGQDENCGESVENQM 120

Query: 127 KPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAV 186
           KP+ILFSNPEFM NSLQVDGSH MTRVSYPYIDPYY GLLC  YSQQ  N  AQVN +AV
Sbjct: 121 KPSILFSNPEFMLNSLQVDGSHPMTRVSYPYIDPYYSGLLCSAYSQQAIN--AQVNSSAV 180

Query: 187 GTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 246
           G APARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH
Sbjct: 181 GIAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 240

Query: 247 ALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCSEIT 306
           ALNRVRGSGGRFLSVKKNQPSD   P  TL QQKSTPD NT SPETGD GTMTATCSEIT
Sbjct: 241 ALNRVRGSGGRFLSVKKNQPSDHITPPATLYQQKSTPDFNTCSPETGDRGTMTATCSEIT 300

Query: 307 SISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           SISNGSVMFG SDSQFS  SSNAGGRMEQYRGR+VHG
Sbjct: 301 SISNGSVMFGRSDSQFSTVSSNAGGRMEQYRGRFVHG 335

[Close]

BLAST of CcUC11G209880.1 vs. NCBI nr
Match: XP_022999213.1 (nuclear transcription factor Y subunit A-3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-141
Identity = 266/340 (78.24%), Postives = 286/340 (84.12%), Query Frame = 0


Query: 4   DLLVNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETP 63
           +LL+NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WRNSNE+K+ + LSDN +LKLETP
Sbjct: 99  ELLMNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRNSNERKIPLPLSDNTTLKLETP 158

Query: 64  PKPHHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVE 123
           P+ HHK L  G QLPDQESSTAHSIGQSLHKVC MEVQNAQEQCISSESGQ+ENCGESVE
Sbjct: 159 PQHHHKHL--GFQLPDQESSTAHSIGQSLHKVCTMEVQNAQEQCISSESGQEENCGESVE 218

Query: 124 NQMKPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNP 183
           NQMKP ILFSNPEFMF++ QVDGS  MTRVSYPYIDPYYGGLLC  Y+QQ  N+QAQVN 
Sbjct: 219 NQMKPVILFSNPEFMFSTPQVDGSQPMTRVSYPYIDPYYGGLLCSAYTQQAINNQAQVNT 278

Query: 184 NAVGTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESR 243
           N VG APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESR
Sbjct: 279 NVVGMAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLESQNRVIRNRKPYLHESR 338

Query: 244 HLHALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCS 303
           HLHALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD NT S ET D G      S
Sbjct: 339 HLHALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRG----MSS 398

Query: 304 EITSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           EITSISNGSV FG SDSQ SA SS  GG MEQY G  + G
Sbjct: 399 EITSISNGSVRFGRSDSQLSALSSRMGGSMEQYSGDLMRG 432

[Close]

BLAST of CcUC11G209880.1 vs. NCBI nr
Match: XP_022999214.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-141
Identity = 266/340 (78.24%), Postives = 286/340 (84.12%), Query Frame = 0


Query: 4   DLLVNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETP 63
           +LL+NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WRNSNE+K+ + LSDN +LKLETP
Sbjct: 23  ELLMNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRNSNERKIPLPLSDNTTLKLETP 82

Query: 64  PKPHHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVE 123
           P+ HHK L  G QLPDQESSTAHSIGQSLHKVC MEVQNAQEQCISSESGQ+ENCGESVE
Sbjct: 83  PQHHHKHL--GFQLPDQESSTAHSIGQSLHKVCTMEVQNAQEQCISSESGQEENCGESVE 142

Query: 124 NQMKPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNP 183
           NQMKP ILFSNPEFMF++ QVDGS  MTRVSYPYIDPYYGGLLC  Y+QQ  N+QAQVN 
Sbjct: 143 NQMKPVILFSNPEFMFSTPQVDGSQPMTRVSYPYIDPYYGGLLCSAYTQQAINNQAQVNT 202

Query: 184 NAVGTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESR 243
           N VG APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESR
Sbjct: 203 NVVGMAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLESQNRVIRNRKPYLHESR 262

Query: 244 HLHALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCS 303
           HLHALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD NT S ET D G      S
Sbjct: 263 HLHALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRG----MSS 322

Query: 304 EITSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           EITSISNGSV FG SDSQ SA SS  GG MEQY G  + G
Sbjct: 323 EITSISNGSVRFGRSDSQLSALSSRMGGSMEQYSGDLMRG 356

[Close]

BLAST of CcUC11G209880.1 vs. NCBI nr
Match: XP_023546978.1 (nuclear transcription factor Y subunit A-3-like [Cucurbita pepo subsp. pepo] >XP_023546979.1 nuclear transcription factor Y subunit A-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509.6 bits (1311), Expect = 2.1e-140
Identity = 265/337 (78.64%), Postives = 282/337 (83.68%), Query Frame = 0


Query: 7   VNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKP 66
           +NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WR+SNE+K+ + LSDN +LKLETPP+ 
Sbjct: 1   MNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRSSNERKIPLPLSDNTTLKLETPPQH 60

Query: 67  HHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQM 126
           HHK L  G QLPDQESSTAHSIG+SLHKVC MEVQNAQEQCISSESGQ+ENCGESVENQM
Sbjct: 61  HHKHL--GFQLPDQESSTAHSIGESLHKVCTMEVQNAQEQCISSESGQEENCGESVENQM 120

Query: 127 KPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAV 186
           KP ILFSNPEFMFNS QVDGS  MTRV YPYIDPYYGGLLC  YSQQ  N+QAQVN N V
Sbjct: 121 KPVILFSNPEFMFNSPQVDGSQPMTRVPYPYIDPYYGGLLCSAYSQQAINNQAQVNTNVV 180

Query: 187 GTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 246
           G APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLEAQN+VIRNRKPYLHESRHLH
Sbjct: 181 GIAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLEAQNRVIRNRKPYLHESRHLH 240

Query: 247 ALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCSEIT 306
           ALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD NT S ET D G      SEIT
Sbjct: 241 ALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRG----VSSEIT 300

Query: 307 SISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           SIS GSV FG SDSQ SA SS  GGRMEQY G  + G
Sbjct: 301 SISYGSVRFGRSDSQLSALSSRMGGRMEQYSGDLMRG 331

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-38
Identity = 117/328 (35.67%), Postives = 160/328 (48.78%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W       +        SL L+   +P H Q    +   DQ+SS+  S
Sbjct: 14  HSTLPYLNTSISWGVVPTDSVANRRGSAESLSLKVDSRPGHIQTTKQISFQDQDSSSTQS 73

Query: 88  IGQSLHKVCAMEVQNAQEQ-CISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDG 147
            GQS  +V +    N   Q   S++SG +    +   +  K   +   P   F   Q + 
Sbjct: 74  TGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASNPKQGSMTGFPNIHFAPAQAN- 133

Query: 148 SHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIY 207
                  S+ Y DP+YGGLL   Y  Q        NP  V   P RVP+   L E  P++
Sbjct: 134 ------FSFHYADPHYGGLLAATYLPQA----PTCNPQMVSMIPGRVPLPAELTETDPVF 193

Query: 208 VNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKK--- 267
           VNAKQYH I+RRRQ RAKLEAQNK+IR RKPYLHESRH+HAL R RGSGGRFL+ KK   
Sbjct: 194 VNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQ 253

Query: 268 --NQPSDRTNPLTTLCQQKSTPDS----NTYSPETGDHGTMTATCSEITSISNGSVMFGW 327
              Q + R      L QQ +   +      +  +     + T + S+ITS+S+G+ +FG 
Sbjct: 254 ESEQAAAREQEQDKLGQQVNRKTNMSRFEAHMLQNNKDRSSTTSGSDITSVSDGADIFGH 313

Query: 328 SDSQFSAASSNAGGRMEQYRGRYVHGRN 346
           ++ QFS   +         R   VHG++
Sbjct: 314 TEFQFSGFPTPIN------RAMLVHGQS 324

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy Swiss-Prot
Match: Q9LNP6 (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 4.9e-31
Identity = 109/322 (33.85%), Postives = 155/322 (48.14%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W    +      +++++SLK+    +P        +   DQ+SS+  S
Sbjct: 13  HSTPPYLSTSISWGLPTKSN---GVTESLSLKV-VDARPERLINTKNISFQDQDSSSTLS 72

Query: 88  IGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDGS 147
             QS + V +    N   Q   S     + C    E Q K   + S          +  S
Sbjct: 73  SAQSSNDVTSSGDDNPSRQI--SFLAHSDVCKGFEETQRKRFAIKSGSS-TAGIADIHSS 132

Query: 148 HSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIYV 207
            S    S+ Y DP++GGL+   Y  Q      Q+          RVP+   L E+ P++V
Sbjct: 133 PSKANFSFHYADPHFGGLMPAAYLPQATIWNPQM---------TRVPLPFDLIENEPVFV 192

Query: 208 NAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKKNQPS 267
           NAKQ+H I+RRRQ RAKLEAQNK+I+ RKPYLHESRH+HAL R RGSGGRFL+ KK Q S
Sbjct: 193 NAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES 252

Query: 268 DRTNPLTTLCQQKSTPDSNTY----SPETGDHGTMTATCSEITSISNGSVMFGWSDSQFS 327
                   + QQ +T + + +       + D    T + S+ITS S+   +FG S+   S
Sbjct: 253 TDPKQDMPIQQQHATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEFLIS 312

Query: 328 AASSNAGGRMEQYRGRYVHGRN 346
              S     M      YVHG++
Sbjct: 313 DCPSQTNPTM------YVHGQS 312

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.3e-28
Identity = 93/254 (36.61%), Postives = 133/254 (52.36%), Query Frame = 0


Query: 38  TTWRNS----NEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHSI-GQSL 97
           T+W NS    +  + + +L+DN +L L    K      + G Q+   +SS+  S  G+S 
Sbjct: 16  TSWDNSVFTNSNVQGSSSLTDNNTLSLTMEMK------QTGFQMQHYDSSSTQSTGGESY 75

Query: 98  HKVCAMEV---QNAQEQCISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDGSHS 157
            +V ++     +      ++  SG  EN     EN +                   GSHS
Sbjct: 76  SEVASLSEPTNRYGHNIVVTHLSGYKEN----PENPI-------------------GSHS 135

Query: 158 MTRVS---------------YPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVP 217
           +++VS               +  + P++ G L   Y+ Q        +P   G  P+R+P
Sbjct: 136 ISKVSQDSVVLPIEAASWPLHGNVTPHFNGFLSFPYASQ----HTVQHPQIRGLVPSRMP 195

Query: 218 ISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGS 269
           + H + E+ PI+VNAKQY  ILRRR+ RAKLEAQNK+I+ RKPYLHESRHLHAL RVRGS
Sbjct: 196 LPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGS 236

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.2e-26
Identity = 108/308 (35.06%), Postives = 146/308 (47.40%), Query Frame = 0


Query: 38  TTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAH----------- 97
           TT  N    +      D I    + P   H      GLQL +Q+S+++            
Sbjct: 18  TTNSNIQGSESFSLTKDMIMSTTQLPAMKHS-----GLQLQNQDSTSSQSTEEESGGGEV 77

Query: 98  -SIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQMKPAILFS--NPEFMF---N 157
            S G+     C++   N         SG  EN G+ +EN  K     S  + + +F    
Sbjct: 78  ASFGEYKRYGCSIVNNNL--------SGYIENLGKPIENYTKSITTSSMVSQDSVFPAPT 137

Query: 158 SLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLA 217
           S Q+  S      S      ++ G L   Y+       A  +   +G   +RVP+ H + 
Sbjct: 138 SGQISWSLQCAETS------HFNGFLAPEYAS---TPTALPHLEMMGLVSSRVPLPHHIQ 197

Query: 218 EDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLS 277
           E+ PI+VNAKQYH ILRRR+ RAKLEAQNK+I+ RKPYLHESRHLHAL R RGSGGRFL+
Sbjct: 198 ENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLN 257

Query: 278 VKKNQPSDRTNPLTTLCQQKSTPDSN-TYSPETGDHGTMTATCSEITSISNGSVMFGWSD 328
            KK Q S       +LC  +     N + SP  G  G  +++ S  +S SN   MF    
Sbjct: 258 TKKLQESS-----NSLCSSQMANGQNFSMSPHGGGSGIGSSSISP-SSNSNCINMFQNPQ 297

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.0e-25
Identity = 63/117 (53.85%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 147 SHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIY 206
           ++SM    YPY DPYY  +       Q +     V+   +G     VP+     E+ P++
Sbjct: 50  TNSMAPGQYPYPDPYYRSIFAP--PPQPYTG---VHLQLMGVQQQGVPLPSDAVEE-PVF 109

Query: 207 VNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKK 264
           VNAKQYHGILRRRQSRA+LE+QNKVI++RKPYLHESRHLHA+ R RG GGRFL+ KK
Sbjct: 110 VNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKK 160

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy TrEMBL
Match: A0A6J1KGE7 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111493659 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.1e-142
Identity = 266/340 (78.24%), Postives = 286/340 (84.12%), Query Frame = 0


Query: 4   DLLVNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETP 63
           +LL+NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WRNSNE+K+ + LSDN +LKLETP
Sbjct: 23  ELLMNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRNSNERKIPLPLSDNTTLKLETP 82

Query: 64  PKPHHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVE 123
           P+ HHK L  G QLPDQESSTAHSIGQSLHKVC MEVQNAQEQCISSESGQ+ENCGESVE
Sbjct: 83  PQHHHKHL--GFQLPDQESSTAHSIGQSLHKVCTMEVQNAQEQCISSESGQEENCGESVE 142

Query: 124 NQMKPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNP 183
           NQMKP ILFSNPEFMF++ QVDGS  MTRVSYPYIDPYYGGLLC  Y+QQ  N+QAQVN 
Sbjct: 143 NQMKPVILFSNPEFMFSTPQVDGSQPMTRVSYPYIDPYYGGLLCSAYTQQAINNQAQVNT 202

Query: 184 NAVGTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESR 243
           N VG APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESR
Sbjct: 203 NVVGMAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLESQNRVIRNRKPYLHESR 262

Query: 244 HLHALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCS 303
           HLHALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD NT S ET D G      S
Sbjct: 263 HLHALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRG----MSS 322

Query: 304 EITSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           EITSISNGSV FG SDSQ SA SS  GG MEQY G  + G
Sbjct: 323 EITSISNGSVRFGRSDSQLSALSSRMGGSMEQYSGDLMRG 356

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy TrEMBL
Match: A0A6J1KIZ5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111493659 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.1e-142
Identity = 266/340 (78.24%), Postives = 286/340 (84.12%), Query Frame = 0


Query: 4   DLLVNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETP 63
           +LL+NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WRNSNE+K+ + LSDN +LKLETP
Sbjct: 99  ELLMNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRNSNERKIPLPLSDNTTLKLETP 158

Query: 64  PKPHHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVE 123
           P+ HHK L  G QLPDQESSTAHSIGQSLHKVC MEVQNAQEQCISSESGQ+ENCGESVE
Sbjct: 159 PQHHHKHL--GFQLPDQESSTAHSIGQSLHKVCTMEVQNAQEQCISSESGQEENCGESVE 218

Query: 124 NQMKPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNP 183
           NQMKP ILFSNPEFMF++ QVDGS  MTRVSYPYIDPYYGGLLC  Y+QQ  N+QAQVN 
Sbjct: 219 NQMKPVILFSNPEFMFSTPQVDGSQPMTRVSYPYIDPYYGGLLCSAYTQQAINNQAQVNT 278

Query: 184 NAVGTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESR 243
           N VG APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESR
Sbjct: 279 NVVGMAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLESQNRVIRNRKPYLHESR 338

Query: 244 HLHALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCS 303
           HLHALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD NT S ET D G      S
Sbjct: 339 HLHALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRG----MSS 398

Query: 304 EITSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           EITSISNGSV FG SDSQ SA SS  GG MEQY G  + G
Sbjct: 399 EITSISNGSVRFGRSDSQLSALSSRMGGSMEQYSGDLMRG 432

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy TrEMBL
Match: A0A6J1KA88 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111493659 PE=3 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 1.0e-140
Identity = 264/337 (78.34%), Postives = 283/337 (83.98%), Query Frame = 0


Query: 7   VNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKP 66
           +NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WRNSNE+K+ + LSDN +LKLETPP+ 
Sbjct: 1   MNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRNSNERKIPLPLSDNTTLKLETPPQH 60

Query: 67  HHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQM 126
           HHK L  G QLPDQESSTAHSIGQSLHKVC MEVQNAQEQCISSESGQ+ENCGESVENQM
Sbjct: 61  HHKHL--GFQLPDQESSTAHSIGQSLHKVCTMEVQNAQEQCISSESGQEENCGESVENQM 120

Query: 127 KPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAV 186
           KP ILFSNPEFMF++ QVDGS  MTRVSYPYIDPYYGGLLC  Y+QQ  N+QAQVN N V
Sbjct: 121 KPVILFSNPEFMFSTPQVDGSQPMTRVSYPYIDPYYGGLLCSAYTQQAINNQAQVNTNVV 180

Query: 187 GTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 246
           G APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLE+QN+VIRNRKPYLHESRHLH
Sbjct: 181 GMAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLESQNRVIRNRKPYLHESRHLH 240

Query: 247 ALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCSEIT 306
           ALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD NT S ET D G      SEIT
Sbjct: 241 ALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRG----MSSEIT 300

Query: 307 SISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           SISNGSV FG SDSQ SA SS  GG MEQY G  + G
Sbjct: 301 SISNGSVRFGRSDSQLSALSSRMGGSMEQYSGDLMRG 331

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy TrEMBL
Match: A0A6J1G4J0 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111450712 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.7e-140
Identity = 266/341 (78.01%), Postives = 286/341 (83.87%), Query Frame = 0


Query: 4   DLLVNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETP 63
           +LL+NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WR+SNE+K+ + LSDN +LKLETP
Sbjct: 59  ELLMNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRSSNERKIPLPLSDNTTLKLETP 118

Query: 64  PKPHHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVE 123
           P+ HHK L  G QLPDQESSTAHSIG+SLHKVC MEVQNAQEQCISSESGQ+ENCGESVE
Sbjct: 119 PQHHHKHL--GFQLPDQESSTAHSIGESLHKVCTMEVQNAQEQCISSESGQEENCGESVE 178

Query: 124 NQMKPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNP 183
           NQMKP ILFSNPEFMFNS QVDGS  MTRVSYPY+DPYYGGLLC  YSQQ  N+QAQVN 
Sbjct: 179 NQMKPIILFSNPEFMFNSPQVDGSQPMTRVSYPYVDPYYGGLLCSAYSQQAINNQAQVNT 238

Query: 184 NAVGTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESR 243
           N VG APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLEAQN+VIRNRKPYLHESR
Sbjct: 239 NVVGIAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLEAQNRVIRNRKPYLHESR 298

Query: 244 HLHALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCS 303
           HLHALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD +T   ET D G      S
Sbjct: 299 HLHALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFSTCISETSDRG----VSS 358

Query: 304 EI-TSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           EI TSISNGSV FG SDSQ SA SS  GGRMEQY G  + G
Sbjct: 359 EITTSISNGSVRFGRSDSQLSALSSRMGGRMEQYSGDLMRG 393

[Close]

BLAST of CcUC11G209880.1 vs. ExPASy TrEMBL
Match: A0A6J1G4P8 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111450712 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.5e-139
Identity = 264/338 (78.11%), Postives = 283/338 (83.73%), Query Frame = 0


Query: 7   VNMMAIPLENFSQKHLDQDPVHSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKP 66
           +NMMAIPL+NFSQK+LDQD VHSVFPFSVDCT WR+SNE+K+ + LSDN +LKLETPP+ 
Sbjct: 1   MNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRSSNERKIPLPLSDNTTLKLETPPQH 60

Query: 67  HHKQLEVGLQLPDQESSTAHSIGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQM 126
           HHK L  G QLPDQESSTAHSIG+SLHKVC MEVQNAQEQCISSESGQ+ENCGESVENQM
Sbjct: 61  HHKHL--GFQLPDQESSTAHSIGESLHKVCTMEVQNAQEQCISSESGQEENCGESVENQM 120

Query: 127 KPAILFSNPEFMFNSLQVDGSHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAV 186
           KP ILFSNPEFMFNS QVDGS  MTRVSYPY+DPYYGGLLC  YSQQ  N+QAQVN N V
Sbjct: 121 KPIILFSNPEFMFNSPQVDGSQPMTRVSYPYVDPYYGGLLCSAYSQQAINNQAQVNTNVV 180

Query: 187 GTAPARVPISHGLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLH 246
           G APARVPI H LAEDGPIYVNAKQYHGILRRRQSRAKLEAQN+VIRNRKPYLHESRHLH
Sbjct: 181 GIAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLEAQNRVIRNRKPYLHESRHLH 240

Query: 247 ALNRVRGSGGRFLSVKKNQPSDRTNPLTTLCQQKSTPDSNTYSPETGDHGTMTATCSEI- 306
           ALNRVRGSGGRFLS KKNQ   ++ P TTL QQ +TPD +T   ET D G      SEI 
Sbjct: 241 ALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFSTCISETSDRG----VSSEIT 300

Query: 307 TSISNGSVMFGWSDSQFSAASSNAGGRMEQYRGRYVHG 344
           TSISNGSV FG SDSQ SA SS  GGRMEQY G  + G
Sbjct: 301 TSISNGSVRFGRSDSQLSALSSRMGGRMEQYSGDLMRG 332

[Close]

BLAST of CcUC11G209880.1 vs. TAIR 10
Match: AT1G72830.1 (nuclear factor Y, subunit A3 )

HSP 1 Score: 159.8 bits (403), Expect = 3.8e-39
Identity = 117/328 (35.67%), Postives = 160/328 (48.78%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W       +        SL L+   +P H Q    +   DQ+SS+  S
Sbjct: 14  HSTLPYLNTSISWGVVPTDSVANRRGSAESLSLKVDSRPGHIQTTKQISFQDQDSSSTQS 73

Query: 88  IGQSLHKVCAMEVQNAQEQ-CISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDG 147
            GQS  +V +    N   Q   S++SG +    +   +  K   +   P   F   Q + 
Sbjct: 74  TGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASNPKQGSMTGFPNIHFAPAQAN- 133

Query: 148 SHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIY 207
                  S+ Y DP+YGGLL   Y  Q        NP  V   P RVP+   L E  P++
Sbjct: 134 ------FSFHYADPHYGGLLAATYLPQA----PTCNPQMVSMIPGRVPLPAELTETDPVF 193

Query: 208 VNAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKK--- 267
           VNAKQYH I+RRRQ RAKLEAQNK+IR RKPYLHESRH+HAL R RGSGGRFL+ KK   
Sbjct: 194 VNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQ 253

Query: 268 --NQPSDRTNPLTTLCQQKSTPDS----NTYSPETGDHGTMTATCSEITSISNGSVMFGW 327
              Q + R      L QQ +   +      +  +     + T + S+ITS+S+G+ +FG 
Sbjct: 254 ESEQAAAREQEQDKLGQQVNRKTNMSRFEAHMLQNNKDRSSTTSGSDITSVSDGADIFGH 313

Query: 328 SDSQFSAASSNAGGRMEQYRGRYVHGRN 346
           ++ QFS   +         R   VHG++
Sbjct: 314 TEFQFSGFPTPIN------RAMLVHGQS 324

[Close]

BLAST of CcUC11G209880.1 vs. TAIR 10
Match: AT1G72830.2 (nuclear factor Y, subunit A3 )

HSP 1 Score: 155.2 bits (391), Expect = 9.4e-38
Identity = 117/329 (35.56%), Postives = 160/329 (48.63%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W       +        SL L+   +P H Q    +   DQ+SS+  S
Sbjct: 14  HSTLPYLNTSISWGVVPTDSVANRRGSAESLSLKVDSRPGHIQTTKQISFQDQDSSSTQS 73

Query: 88  IGQSLHKVCAMEVQNAQEQ-CISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDG 147
            GQS  +V +    N   Q   S++SG +    +   +  K   +   P   F   Q + 
Sbjct: 74  TGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASNPKQGSMTGFPNIHFAPAQAN- 133

Query: 148 SHSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIY 207
                  S+ Y DP+YGGLL   Y  Q        NP  V   P RVP+   L E  P++
Sbjct: 134 ------FSFHYADPHYGGLLAATYLPQA----PTCNPQMVSMIPGRVPLPAELTETDPVF 193

Query: 208 VNAKQYHGILRRRQSRAKLEAQNKVIRNRK-PYLHESRHLHALNRVRGSGGRFLSVKK-- 267
           VNAKQYH I+RRRQ RAKLEAQNK+IR RK PYLHESRH+HAL R RGSGGRFL+ KK  
Sbjct: 194 VNAKQYHAIMRRRQQRAKLEAQNKLIRARKVPYLHESRHVHALKRPRGSGGRFLNTKKLL 253

Query: 268 ---NQPSDRTNPLTTLCQQKSTPDS----NTYSPETGDHGTMTATCSEITSISNGSVMFG 327
               Q + R      L QQ +   +      +  +     + T + S+ITS+S+G+ +FG
Sbjct: 254 QESEQAAAREQEQDKLGQQVNRKTNMSRFEAHMLQNNKDRSSTTSGSDITSVSDGADIFG 313

Query: 328 WSDSQFSAASSNAGGRMEQYRGRYVHGRN 346
            ++ QFS   +         R   VHG++
Sbjct: 314 HTEFQFSGFPTPIN------RAMLVHGQS 325

[Close]

BLAST of CcUC11G209880.1 vs. TAIR 10
Match: AT1G17590.1 (nuclear factor Y, subunit A8 )

HSP 1 Score: 136.7 bits (343), Expect = 3.5e-32
Identity = 109/322 (33.85%), Postives = 155/322 (48.14%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W    +      +++++SLK+    +P        +   DQ+SS+  S
Sbjct: 13  HSTPPYLSTSISWGLPTKSN---GVTESLSLKV-VDARPERLINTKNISFQDQDSSSTLS 72

Query: 88  IGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDGS 147
             QS + V +    N   Q   S     + C    E Q K   + S          +  S
Sbjct: 73  SAQSSNDVTSSGDDNPSRQI--SFLAHSDVCKGFEETQRKRFAIKSGSS-TAGIADIHSS 132

Query: 148 HSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIYV 207
            S    S+ Y DP++GGL+   Y  Q      Q+          RVP+   L E+ P++V
Sbjct: 133 PSKANFSFHYADPHFGGLMPAAYLPQATIWNPQM---------TRVPLPFDLIENEPVFV 192

Query: 208 NAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKKNQPS 267
           NAKQ+H I+RRRQ RAKLEAQNK+I+ RKPYLHESRH+HAL R RGSGGRFL+ KK Q S
Sbjct: 193 NAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES 252

Query: 268 DRTNPLTTLCQQKSTPDSNTY----SPETGDHGTMTATCSEITSISNGSVMFGWSDSQFS 327
                   + QQ +T + + +       + D    T + S+ITS S+   +FG S+   S
Sbjct: 253 TDPKQDMPIQQQHATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEFLIS 312

Query: 328 AASSNAGGRMEQYRGRYVHGRN 346
              S     M      YVHG++
Sbjct: 313 DCPSQTNPTM------YVHGQS 312

[Close]

BLAST of CcUC11G209880.1 vs. TAIR 10
Match: AT1G17590.2 (nuclear factor Y, subunit A8 )

HSP 1 Score: 136.7 bits (343), Expect = 3.5e-32
Identity = 109/322 (33.85%), Postives = 155/322 (48.14%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W    +      +++++SLK+    +P        +   DQ+SS+  S
Sbjct: 13  HSTPPYLSTSISWGLPTKSN---GVTESLSLKV-VDARPERLINTKNISFQDQDSSSTLS 72

Query: 88  IGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDGS 147
             QS + V +    N   Q   S     + C    E Q K   + S          +  S
Sbjct: 73  SAQSSNDVTSSGDDNPSRQI--SFLAHSDVCKGFEETQRKRFAIKSGSS-TAGIADIHSS 132

Query: 148 HSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIYV 207
            S    S+ Y DP++GGL+   Y  Q      Q+          RVP+   L E+ P++V
Sbjct: 133 PSKANFSFHYADPHFGGLMPAAYLPQATIWNPQM---------TRVPLPFDLIENEPVFV 192

Query: 208 NAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKKNQPS 267
           NAKQ+H I+RRRQ RAKLEAQNK+I+ RKPYLHESRH+HAL R RGSGGRFL+ KK Q S
Sbjct: 193 NAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES 252

Query: 268 DRTNPLTTLCQQKSTPDSNTY----SPETGDHGTMTATCSEITSISNGSVMFGWSDSQFS 327
                   + QQ +T + + +       + D    T + S+ITS S+   +FG S+   S
Sbjct: 253 TDPKQDMPIQQQHATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEFLIS 312

Query: 328 AASSNAGGRMEQYRGRYVHGRN 346
              S     M      YVHG++
Sbjct: 313 DCPSQTNPTM------YVHGQS 312

[Close]

BLAST of CcUC11G209880.1 vs. TAIR 10
Match: AT1G17590.3 (nuclear factor Y, subunit A8 )

HSP 1 Score: 136.7 bits (343), Expect = 3.5e-32
Identity = 109/322 (33.85%), Postives = 155/322 (48.14%), Query Frame = 0


Query: 28  HSVFPFSVDCTTWRNSNEKKMTMALSDNISLKLETPPKPHHKQLEVGLQLPDQESSTAHS 87
           HS  P+     +W    +      +++++SLK+    +P        +   DQ+SS+  S
Sbjct: 13  HSTPPYLSTSISWGLPTKSN---GVTESLSLKV-VDARPERLINTKNISFQDQDSSSTLS 72

Query: 88  IGQSLHKVCAMEVQNAQEQCISSESGQDENCGESVENQMKPAILFSNPEFMFNSLQVDGS 147
             QS + V +    N   Q   S     + C    E Q K   + S          +  S
Sbjct: 73  SAQSSNDVTSSGDDNPSRQI--SFLAHSDVCKGFEETQRKRFAIKSGSS-TAGIADIHSS 132

Query: 148 HSMTRVSYPYIDPYYGGLLCGGYSQQGFNSQAQVNPNAVGTAPARVPISHGLAEDGPIYV 207
            S    S+ Y DP++GGL+   Y  Q      Q+          RVP+   L E+ P++V
Sbjct: 133 PSKANFSFHYADPHFGGLMPAAYLPQATIWNPQM---------TRVPLPFDLIENEPVFV 192

Query: 208 NAKQYHGILRRRQSRAKLEAQNKVIRNRKPYLHESRHLHALNRVRGSGGRFLSVKKNQPS 267
           NAKQ+H I+RRRQ RAKLEAQNK+I+ RKPYLHESRH+HAL R RGSGGRFL+ KK Q S
Sbjct: 193 NAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES 252

Query: 268 DRTNPLTTLCQQKSTPDSNTY----SPETGDHGTMTATCSEITSISNGSVMFGWSDSQFS 327
                   + QQ +T + + +       + D    T + S+ITS S+   +FG S+   S
Sbjct: 253 TDPKQDMPIQQQHATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEFLIS 312

Query: 328 AASSNAGGRMEQYRGRYVHGRN 346
              S     M      YVHG++
Sbjct: 313 DCPSQTNPTM------YVHGQS 312

The following BLAST results are available for this feature:

BLAST of CcUC11G209880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890752.1	3.2e-165	88.72	nuclear transcription factor Y subunit A-4-like isoform X1 [Benincasa hispida] >...	[more]
XP_038890756.1	6.8e-163	88.43	nuclear transcription factor Y subunit A-4-like isoform X2 [Benincasa hispida]	[more]
XP_022999213.1	1.5e-141	78.24	nuclear transcription factor Y subunit A-3-like isoform X1 [Cucurbita maxima]	[more]
XP_022999214.1	1.5e-141	78.24	nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita maxima]	[more]
XP_023546978.1	2.1e-140	78.64	nuclear transcription factor Y subunit A-3-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of CcUC11G209880.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZH2	5.4e-38	35.67	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LNP6	4.9e-31	33.85	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LVJ7	2.3e-28	36.61	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	6.2e-26	35.06	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	4.0e-25	53.85	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CcUC11G209880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGE7	7.1e-142	78.24	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114936...	[more]
A0A6J1KIZ5	7.1e-142	78.24	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114936...	[more]
A0A6J1KA88	1.0e-140	78.34	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114936...	[more]
A0A6J1G4J0	1.7e-140	78.01	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1G4P8	2.5e-139	78.11	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of CcUC11G209880.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72830.1	3.8e-39	35.67	nuclear factor Y, subunit A3	[more]
AT1G72830.2	9.4e-38	35.56	nuclear factor Y, subunit A3	[more]
AT1G17590.1	3.5e-32	33.85	nuclear factor Y, subunit A8	[more]
AT1G17590.2	3.5e-32	33.85	nuclear factor Y, subunit A8	[more]
AT1G17590.3	3.5e-32	33.85	nuclear factor Y, subunit A8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 235..258 score: 76.62 coord: 204..226 score: 78.99
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 200..261 e-value: 3.2E-36 score: 136.3
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 204..258 e-value: 9.2E-27 score: 93.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 34..328
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 201..261 score: 36.255833
None	No IPR available	GENE3D	6.10.250.2430		coord: 201..263 e-value: 5.2E-31 score: 109.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..295
None	No IPR available	PANTHER	PTHR12632:SF53	CCAAT-BINDING TRANSCRIPTION FACTOR	coord: 34..328
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 206..226

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC11G209880	CcUC11G209880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G209880.1-exon	CcUC11G209880.1-exon-CicolChr11:1831198..1831534	exon
CcUC11G209880.1-exon	CcUC11G209880.1-exon-CicolChr11:1831819..1831931	exon
CcUC11G209880.1-exon	CcUC11G209880.1-exon-CicolChr11:1832001..1832078	exon
CcUC11G209880.1-exon	CcUC11G209880.1-exon-CicolChr11:1832228..1832407	exon
CcUC11G209880.1-exon	CcUC11G209880.1-exon-CicolChr11:1833138..1833473	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC11G209880.1-cds	CcUC11G209880.1-cds-CicolChr11:1831198..1831534	CDS
CcUC11G209880.1-cds	CcUC11G209880.1-cds-CicolChr11:1831819..1831931	CDS
CcUC11G209880.1-cds	CcUC11G209880.1-cds-CicolChr11:1832001..1832078	CDS
CcUC11G209880.1-cds	CcUC11G209880.1-cds-CicolChr11:1832228..1832407	CDS
CcUC11G209880.1-cds	CcUC11G209880.1-cds-CicolChr11:1833138..1833473	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC11G209880.1	CcUC11G209880.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity