CcUC10G205020.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G205020.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr10: 32308501 .. 32310393 (+)
Sequence length	1893
RNA-Seq Expression	CcUC10G205020.1
Synteny	CcUC10G205020.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTTGTTTTTGTGCCCAAGCCTTGTGGTTTATTGATCTCACATTGCTACTCTACTCTTTTTCGGTCTAATCTTTGTCCCTCTCACTGTCTTCTCCATCTTCTTCAGCACGCCATCAATCACCAATCTAAGAAGTGCATCCGGCAATCTCATGCTCAGGTTATTACTCATGGGTTGGAACAAAACACTTTCTTGATAACTAAACTTATTTCTGCATACTCAATTTGTGGTGACCTTAAGGAGTTGAGTCTCGTATTTAACTTGGTTTCAATTAGGACTGTTTATATATGGAACTCCTTGATTAATGGGTATGTTAAGAACTGTGCGTTCCATGGGGCATTTGATCGTTTTAATGAAATGCAACAATGCAACACAATGCCAGATGACTTTACATTATCCATATTGGCAAAAGCATCCATCGAGCTTGGGAATGTGGTTGGGAAATCGATTCATGGGAAGAGTTTACGACTTGGTTTCATGTCAGATATCATCGTTGCTAATTCTCTCATATCAATGTACTTTAAGTATGGAGAGTGCAAAGAATCATTAAAGCTGTTTGATGAAATGCCTGAAAGAAATTCAGGTTCATGGAATGCCCTATTAGCTGGCTATGCCAGTTTTAGTGATTGTTTCTATGTTAAAGAAGCATGGGAAGCTGTTAGAAGTATGCAGATAGATGGAATAAAACCTGATGCCTTCACTATTTCAAGTCTTCTGCCGTTGTGTGGCAATCCCAATGGGAAATTGAGCTATGGGAAAGAGCTCCATTGTTATATTGTGAAGAATGAGTTGGATCTTGATTTTGGCTCAAAATTTCATCTCGGCTGCGGTTTGATCGATATGTACTCTAGGGCGAATGACATCATTGCTTCAAGGTATGTATTTGACCAAATCAAGAGTAGAAATATATATGTTTGGACAGCAATGGTAAGAGCTTATGCACAAAATGAAGATTCGGAGAAGGCATTAATTCTTTTCCAGGAGATGCAGATTAAAGATGGAATAGTACCAAATAGAATATCCCTTATTAGTCTTCTCCCTGCTTGTAGTTCACATGCTGGATTAATGAATGGAAAACAAATCCATGGTTTTGTTGTCAGAAAAGAATTTCATGATGATATATCTTTGTGTAATGCATTGATTGATATGTATTCAAAATGTGGTAGCTTGGAAAATGCAAGAAAAGTTTTTGAGTCTGATTCCTTTTGTAAAGATACAATCTCTTGGACTACATTAATTTCTGCTTATGGGTTACACGGACAGGGCAAGGAATCTATAAGATTGTATAATGATATGGTTGAGCTTGGTATCAAGCCAGACCCGATAACTGTAGTCGCAGTTTTATCAGCTTGTGGCCGGTCTGGTTTGGTAAATGAAGGTCTCCAACTATACATCACTGCAATTCAAGAGTACGAAATTGAACCAACTGCTGAGATCTGTGCTATTGTGGTTGACATGTTGGGCACTATCGGCGAACTAGAACGAGCATTGAGTTTTATTAAAAGAATGACGGCAGAACCTAGTCCAGGTGTCTGGGGAGCTCTTGTTTCTGCTTCTATTAGATACAAGAATTATGAGATGTTAGAATTGGCTTACAGATTCCTTACCGAGTTAGAGCCAGACAATCCATCTAACTTCATTTCACTGTCAAATTTGCATGCTTCTGCTAGCAGATGGGATGTGGTAGCTGAGCTTAGAAACACCATGAGGGAAAGAGGTCTAAGGAAGGCTCCTGGCTGTAGTTGGGTTAACATTAATACAAAGACCCATTGTTTTCATGTTGCTGATAAAACGCATCCAAGTTCCAAGTTGATTTATGAAGTTCTAGACCATGTTTTTATTATCATGAAAGAACCATGTTGTTCTGATGATATAGAATATTTGATCTAA

mRNA sequence

ATGAACCTTGTTTTTGTGCCCAAGCCTTGTGGTTTATTGATCTCACATTGCTACTCTACTCTTTTTCGGTCTAATCTTTGTCCCTCTCACTGTCTTCTCCATCTTCTTCAGCACGCCATCAATCACCAATCTAAGAAGTGCATCCGGCAATCTCATGCTCAGGTTATTACTCATGGGTTGGAACAAAACACTTTCTTGATAACTAAACTTATTTCTGCATACTCAATTTGTGGTGACCTTAAGGAGTTGAGTCTCGTATTTAACTTGGTTTCAATTAGGACTGTTTATATATGGAACTCCTTGATTAATGGGTATGTTAAGAACTGTGCGTTCCATGGGGCATTTGATCGTTTTAATGAAATGCAACAATGCAACACAATGCCAGATGACTTTACATTATCCATATTGGCAAAAGCATCCATCGAGCTTGGGAATGTGGTTGGGAAATCGATTCATGGGAAGAGTTTACGACTTGGTTTCATGTCAGATATCATCGTTGCTAATTCTCTCATATCAATGTACTTTAAGTATGGAGAGTGCAAAGAATCATTAAAGCTGTTTGATGAAATGCCTGAAAGAAATTCAGGTTCATGGAATGCCCTATTAGCTGGCTATGCCAGTTTTAGTGATTGTTTCTATGTTAAAGAAGCATGGGAAGCTGTTAGAAGTATGCAGATAGATGGAATAAAACCTGATGCCTTCACTATTTCAAGTCTTCTGCCGTTGTGTGGCAATCCCAATGGGAAATTGAGCTATGGGAAAGAGCTCCATTGTTATATTGTGAAGAATGAGTTGGATCTTGATTTTGGCTCAAAATTTCATCTCGGCTGCGGTTTGATCGATATGTACTCTAGGGCGAATGACATCATTGCTTCAAGGTATGTATTTGACCAAATCAAGAGTAGAAATATATATGTTTGGACAGCAATGGTAAGAGCTTATGCACAAAATGAAGATTCGGAGAAGGCATTAATTCTTTTCCAGGAGATGCAGATTAAAGATGGAATAGTACCAAATAGAATATCCCTTATTAGTCTTCTCCCTGCTTGTAGTTCACATGCTGGATTAATGAATGGAAAACAAATCCATGGTTTTGTTGTCAGAAAAGAATTTCATGATGATATATCTTTGTGTAATGCATTGATTGATATGTATTCAAAATGTGGTAGCTTGGAAAATGCAAGAAAAGTTTTTGAGTCTGATTCCTTTTGTAAAGATACAATCTCTTGGACTACATTAATTTCTGCTTATGGGTTACACGGACAGGGCAAGGAATCTATAAGATTGTATAATGATATGGTTGAGCTTGGTATCAAGCCAGACCCGATAACTGTAGTCGCAGTTTTATCAGCTTGTGGCCGGTCTGGTTTGGTAAATGAAGGTCTCCAACTATACATCACTGCAATTCAAGAGTACGAAATTGAACCAACTGCTGAGATCTGTGCTATTGTGGTTGACATGTTGGGCACTATCGGCGAACTAGAACGAGCATTGAGTTTTATTAAAAGAATGACGGCAGAACCTAGTCCAGGTGTCTGGGGAGCTCTTGTTTCTGCTTCTATTAGATACAAGAATTATGAGATGTTAGAATTGGCTTACAGATTCCTTACCGAGTTAGAGCCAGACAATCCATCTAACTTCATTTCACTGTCAAATTTGCATGCTTCTGCTAGCAGATGGGATGTGGTAGCTGAGCTTAGAAACACCATGAGGGAAAGAGGTCTAAGGAAGGCTCCTGGCTGTAGTTGGGTTAACATTAATACAAAGACCCATTGTTTTCATGTTGCTGATAAAACGCATCCAAGTTCCAAGTTGATTTATGAAGTTCTAGACCATGTTTTTATTATCATGAAAGAACCATGTTGTTCTGATGATATAGAATATTTGATCTAA

Coding sequence (CDS)

ATGAACCTTGTTTTTGTGCCCAAGCCTTGTGGTTTATTGATCTCACATTGCTACTCTACTCTTTTTCGGTCTAATCTTTGTCCCTCTCACTGTCTTCTCCATCTTCTTCAGCACGCCATCAATCACCAATCTAAGAAGTGCATCCGGCAATCTCATGCTCAGGTTATTACTCATGGGTTGGAACAAAACACTTTCTTGATAACTAAACTTATTTCTGCATACTCAATTTGTGGTGACCTTAAGGAGTTGAGTCTCGTATTTAACTTGGTTTCAATTAGGACTGTTTATATATGGAACTCCTTGATTAATGGGTATGTTAAGAACTGTGCGTTCCATGGGGCATTTGATCGTTTTAATGAAATGCAACAATGCAACACAATGCCAGATGACTTTACATTATCCATATTGGCAAAAGCATCCATCGAGCTTGGGAATGTGGTTGGGAAATCGATTCATGGGAAGAGTTTACGACTTGGTTTCATGTCAGATATCATCGTTGCTAATTCTCTCATATCAATGTACTTTAAGTATGGAGAGTGCAAAGAATCATTAAAGCTGTTTGATGAAATGCCTGAAAGAAATTCAGGTTCATGGAATGCCCTATTAGCTGGCTATGCCAGTTTTAGTGATTGTTTCTATGTTAAAGAAGCATGGGAAGCTGTTAGAAGTATGCAGATAGATGGAATAAAACCTGATGCCTTCACTATTTCAAGTCTTCTGCCGTTGTGTGGCAATCCCAATGGGAAATTGAGCTATGGGAAAGAGCTCCATTGTTATATTGTGAAGAATGAGTTGGATCTTGATTTTGGCTCAAAATTTCATCTCGGCTGCGGTTTGATCGATATGTACTCTAGGGCGAATGACATCATTGCTTCAAGGTATGTATTTGACCAAATCAAGAGTAGAAATATATATGTTTGGACAGCAATGGTAAGAGCTTATGCACAAAATGAAGATTCGGAGAAGGCATTAATTCTTTTCCAGGAGATGCAGATTAAAGATGGAATAGTACCAAATAGAATATCCCTTATTAGTCTTCTCCCTGCTTGTAGTTCACATGCTGGATTAATGAATGGAAAACAAATCCATGGTTTTGTTGTCAGAAAAGAATTTCATGATGATATATCTTTGTGTAATGCATTGATTGATATGTATTCAAAATGTGGTAGCTTGGAAAATGCAAGAAAAGTTTTTGAGTCTGATTCCTTTTGTAAAGATACAATCTCTTGGACTACATTAATTTCTGCTTATGGGTTACACGGACAGGGCAAGGAATCTATAAGATTGTATAATGATATGGTTGAGCTTGGTATCAAGCCAGACCCGATAACTGTAGTCGCAGTTTTATCAGCTTGTGGCCGGTCTGGTTTGGTAAATGAAGGTCTCCAACTATACATCACTGCAATTCAAGAGTACGAAATTGAACCAACTGCTGAGATCTGTGCTATTGTGGTTGACATGTTGGGCACTATCGGCGAACTAGAACGAGCATTGAGTTTTATTAAAAGAATGACGGCAGAACCTAGTCCAGGTGTCTGGGGAGCTCTTGTTTCTGCTTCTATTAGATACAAGAATTATGAGATGTTAGAATTGGCTTACAGATTCCTTACCGAGTTAGAGCCAGACAATCCATCTAACTTCATTTCACTGTCAAATTTGCATGCTTCTGCTAGCAGATGGGATGTGGTAGCTGAGCTTAGAAACACCATGAGGGAAAGAGGTCTAAGGAAGGCTCCTGGCTGTAGTTGGGTTAACATTAATACAAAGACCCATTGTTTTCATGTTGCTGATAAAACGCATCCAAGTTCCAAGTTGATTTATGAAGTTCTAGACCATGTTTTTATTATCATGAAAGAACCATGTTGTTCTGATGATATAGAATATTTGATCTAA

Protein sequence

MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGNVVGKSIHGKSLRLGFMSDIIVANSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKTHPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI

Homology

[Close]

BLAST of CcUC10G205020.1 vs. NCBI nr
Match: XP_038899569.1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida] >XP_038899570.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida] >XP_038899571.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida] >XP_038899572.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1166.4 bits (3016), Expect = 0.0e+00
Identity = 569/631 (90.17%), Postives = 598/631 (94.77%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGLLIS CYSTLFR +LCPSHCLLHLLQHAINHQS+K IRQSHAQVITHGL
Sbjct: 6   MNLVFVPKPCGLLISRCYSTLFRVDLCPSHCLLHLLQHAINHQSQKRIRQSHAQVITHGL 65

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           E NTFLITKLISAYSICGDL+EL+L+F+LVSI+TVYIWNSLI+GYVKN  FHGAFDRFNE
Sbjct: 66  EHNTFLITKLISAYSICGDLQELNLIFDLVSIKTVYIWNSLISGYVKNGVFHGAFDRFNE 125

Query: 121 MQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQQCN MPDDFTLSILAKAS ELGN VVGK IHGKSLRLGF+SDIIVANSLISMYFKYGE
Sbjct: 126 MQQCNIMPDDFTLSILAKASNELGNVVVGKLIHGKSLRLGFISDIIVANSLISMYFKYGE 185

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISSL 240
           CKESLKLFDEMP RNSG+WN LLAGYASFSDCFYVKEAWE VR+MQIDGIKPDAFTISSL
Sbjct: 186 CKESLKLFDEMPVRNSGTWNVLLAGYASFSDCFYVKEAWEVVRNMQIDGIKPDAFTISSL 245

Query: 241 LPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQI 300
           LPLCGN NGKLSYGKELHCYIVKNELDLD GSKFH+GCGLIDMYSR N+IIASRYVFDQI
Sbjct: 246 LPLCGNTNGKLSYGKELHCYIVKNELDLDSGSKFHIGCGLIDMYSRENNIIASRYVFDQI 305

Query: 301 KSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMNG 360
           KSRNIYVWTAMV  YAQNEDS+KALILF+EMQIKDGIVPNRISLISLLPACSSHAGL+NG
Sbjct: 306 KSRNIYVWTAMVSGYAQNEDSDKALILFREMQIKDGIVPNRISLISLLPACSSHAGLING 365

Query: 361 KQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGL 420
           KQIHG+ VRKEFHDD SLCNALIDMYSKCGSLENARKVFES+SFCKDTISWT LISAYGL
Sbjct: 366 KQIHGYAVRKEFHDDASLCNALIDMYSKCGSLENARKVFESESFCKDTISWTALISAYGL 425

Query: 421 HGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAE 480
           HGQG+ESIRLYNDMVELGIK D ITVVAVLSACGRS LVNEGLQLY TA+QEY+IEPTAE
Sbjct: 426 HGQGEESIRLYNDMVELGIKLDQITVVAVLSACGRSSLVNEGLQLYHTAVQEYKIEPTAE 485

Query: 481 ICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTEL 540
           ICA VVDMLG IGELE+ALSFIK MT EP PGVWGALVSASIRY+NYEMLELAYRFL EL
Sbjct: 486 ICAAVVDMLGNIGELEQALSFIKTMTVEPGPGVWGALVSASIRYRNYEMLELAYRFLIEL 545

Query: 541 EPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKT 600
           EP+NPSNFISLSNL+ASASRWDVVAELRNTM+ERGLRKAPGCSW+NI+TKTHCFHVADKT
Sbjct: 546 EPENPSNFISLSNLYASASRWDVVAELRNTMKERGLRKAPGCSWINISTKTHCFHVADKT 605

Query: 601 HPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
           HPSS LIYEVLDH+FIIMKEP CSDDIEYLI
Sbjct: 606 HPSSNLIYEVLDHIFIIMKEPHCSDDIEYLI 636

[Close]

BLAST of CcUC10G205020.1 vs. NCBI nr
Match: XP_016901032.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Cucumis melo] >XP_016901033.1 PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Cucumis melo] >KAA0059642.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08173.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 526/631 (83.36%), Postives = 573/631 (90.81%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGLLIS CYSTL R +LCPS CLLH LQHAINHQS+K I QSHAQVIT GL
Sbjct: 1   MNLVFVPKPCGLLISRCYSTLSRPDLCPSRCLLHFLQHAINHQSQKRIHQSHAQVITQGL 60

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           EQN FLITKL+SAYS CGDLKEL+L+F+L SI+TV+IWNSLI+GYVKN  FHG F RFNE
Sbjct: 61  EQNPFLITKLLSAYSSCGDLKELNLIFDLASIKTVHIWNSLISGYVKNGMFHGVFGRFNE 120

Query: 121 MQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQ+CN +PDDFTLSILAKAS ELGN VVGKSIHGKSLRLG +SDIIVANSLISMYFKYGE
Sbjct: 121 MQKCNIVPDDFTLSILAKASNELGNVVVGKSIHGKSLRLGLISDIIVANSLISMYFKYGE 180

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISSL 240
           CKESLKLF+EMPERNSGSWN LLAGYASFSDCFY KEAWEAVR+MQ+DGIKPDAFTISSL
Sbjct: 181 CKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYAKEAWEAVRNMQMDGIKPDAFTISSL 240

Query: 241 LPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQI 300
           L  CG+PNGKLSYGKELHCYIVKN+LDLD GSKFH+ CGLIDMYSR N+ IASRYVFDQI
Sbjct: 241 LHFCGHPNGKLSYGKELHCYIVKNKLDLDSGSKFHISCGLIDMYSRENNTIASRYVFDQI 300

Query: 301 KSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMNG 360
           KSRNIYVWTAMV  YAQNED +KALILFQEMQ+KDGIVPN+ISLISLLPACS HAGL NG
Sbjct: 301 KSRNIYVWTAMVSGYAQNEDPDKALILFQEMQMKDGIVPNKISLISLLPACSLHAGLTNG 360

Query: 361 KQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGL 420
           KQIHG+ VRKE+ DD++LCNALIDMYSKCGSLE+A+ VFE+DSFCKD ISWTT+I AYGL
Sbjct: 361 KQIHGYAVRKEYLDDVTLCNALIDMYSKCGSLESAKNVFETDSFCKDVISWTTIILAYGL 420

Query: 421 HGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAE 480
           HG  +ESIRLYNDMVEL IKPD ITVVAVLSACGR GLV+EGLQLY TA+QE++IEPTAE
Sbjct: 421 HGLAEESIRLYNDMVELSIKPDQITVVAVLSACGRCGLVSEGLQLYNTAVQEHKIEPTAE 480

Query: 481 ICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTEL 540
           ICA VVDMLG IGEL++A SFIK M  EP P VWGALVSASIRY+NYEMLELAYR+L EL
Sbjct: 481 ICAAVVDMLGNIGELDQAFSFIKTMMVEPGPSVWGALVSASIRYRNYEMLELAYRYLVEL 540

Query: 541 EPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKT 600
           EPDNPSNFISLSNL+ASASRWD+VAELRNTM++RGLRK PGCSW+NINT THCFHVAD+T
Sbjct: 541 EPDNPSNFISLSNLYASASRWDMVAELRNTMKKRGLRKTPGCSWININTTTHCFHVADRT 600

Query: 601 HPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
           HP S LIY VLDHVFI+MKEP CSDDIE+LI
Sbjct: 601 HPISNLIYGVLDHVFIVMKEPHCSDDIEFLI 631

[Close]

BLAST of CcUC10G205020.1 vs. NCBI nr
Match: XP_011659256.1 (pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucumis sativus] >XP_031745203.1 pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucumis sativus] >XP_031745204.1 pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucumis sativus])

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 524/632 (82.91%), Postives = 573/632 (90.66%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNL-CPSHCLLHLLQHAINHQSKKCIRQSHAQVITHG 60
           MNLVFVPKPCGLLIS CYSTL R +L  PS  LLH LQHAINH+S+K I QSHA+VITHG
Sbjct: 1   MNLVFVPKPCGLLISRCYSTLSRPDLISPSPSLLHFLQHAINHRSQKRIHQSHARVITHG 60

Query: 61  LEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFN 120
           L QNTFLITKLISAYSICGDLKEL+L+F+L SI+TVYIWNSLI+GYVK   FHGAF RFN
Sbjct: 61  LGQNTFLITKLISAYSICGDLKELNLIFDLASIKTVYIWNSLISGYVKKGMFHGAFGRFN 120

Query: 121 EMQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVANSLISMYFKYG 180
           EMQ+CN +PDDFTLSILAKAS ELGN VV KSIHGKSLRLGF+SDIIVANSL+SMYFKYG
Sbjct: 121 EMQKCNIVPDDFTLSILAKASNELGNVVVAKSIHGKSLRLGFISDIIVANSLMSMYFKYG 180

Query: 181 ECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISS 240
           ECKESLKLF+EMPERNSGSWN LLAGYASFSDCFYVKEAWEAVR+MQ+DGIKPDAFTISS
Sbjct: 181 ECKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYVKEAWEAVRNMQLDGIKPDAFTISS 240

Query: 241 LLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQ 300
           LL  CG+PNGKLSYGKELHCYIVKNELDLD GSKFH+GCGLI+MYSR N+ IASRYVFDQ
Sbjct: 241 LLQFCGHPNGKLSYGKELHCYIVKNELDLDSGSKFHIGCGLIEMYSRENNTIASRYVFDQ 300

Query: 301 IKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMN 360
           IKSRNIYVWTAMV  YAQNED +KALILF EMQ+KDGIVPN++SL+SLLPACS HAGLMN
Sbjct: 301 IKSRNIYVWTAMVSGYAQNEDPDKALILFHEMQMKDGIVPNKVSLVSLLPACSLHAGLMN 360

Query: 361 GKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYG 420
           GKQIHG+ +RKE+H+D++LCNALID YSKCGSLE A+KVFESDSFCKDTISWTTLISAYG
Sbjct: 361 GKQIHGYAIRKEYHNDVTLCNALIDTYSKCGSLEYAKKVFESDSFCKDTISWTTLISAYG 420

Query: 421 LHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTA 480
           L+G  ++SIRLYNDMVE  IKPD ITV+AVLSACGRSGLVNEGLQLY TA+QE++IEPTA
Sbjct: 421 LYGLAEKSIRLYNDMVERSIKPDQITVLAVLSACGRSGLVNEGLQLYNTAVQEHKIEPTA 480

Query: 481 EICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTE 540
           EICA VV MLG  GELE+A SFI  M  EP PGVWGALVSASI+Y+N EMLELAYR+L E
Sbjct: 481 EICAAVVYMLGNSGELEQAFSFISTMMVEPGPGVWGALVSASIKYRNNEMLELAYRYLVE 540

Query: 541 LEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADK 600
           LEPDNPSNFISLSNL+ASASRWD VAELRNTM+ERG+RK PGCSW+NINTKTHCFH+ADK
Sbjct: 541 LEPDNPSNFISLSNLYASASRWDAVAELRNTMKERGIRKTPGCSWININTKTHCFHIADK 600

Query: 601 THPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
           THP S LIYEVLDHVFI+MKE   SDDIEYLI
Sbjct: 601 THPISNLIYEVLDHVFIVMKETHFSDDIEYLI 632

[Close]

BLAST of CcUC10G205020.1 vs. NCBI nr
Match: XP_023004361.1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1066.2 bits (2756), Expect = 1.1e-307
Identity = 520/632 (82.28%), Postives = 567/632 (89.72%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGL ISHCYSTLF  +L PS  LLH+LQHA+N QS+K IR+SHAQVITHGL
Sbjct: 1   MNLVFVPKPCGLFISHCYSTLFGRDLYPSQRLLHILQHAVNQQSQKFIRESHAQVITHGL 60

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           EQN FLITKLISAYS CGDL E +L+F+LVS RTV IWNSLINGYVKNC FHGAF RFNE
Sbjct: 61  EQNNFLITKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNE 120

Query: 121 MQQCNTMPDDFTLSILAKASIELGNV-VGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQQC+ +PDDFTLS LAKAS EL NV VGKSIHGK +RLGF+ DI+VANSLISMYFKYGE
Sbjct: 121 MQQCDIVPDDFTLSTLAKASSELRNVTVGKSIHGKIVRLGFIFDIVVANSLISMYFKYGE 180

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWE-AVRSMQIDGIKPDAFTISS 240
           CKESLKLFDEMPERNSGSWN LLAGYAS +DCFYVKEAW+  VRSMQIDG+KPDAFTISS
Sbjct: 181 CKESLKLFDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISS 240

Query: 241 LLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQ 300
           LLPLCGNP GKL+YGKELHCYIVKNELDLDFGS  HLGCGLIDMYSR N I ASR+VFDQ
Sbjct: 241 LLPLCGNPIGKLNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQ 300

Query: 301 IKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMN 360
           IK RNIYVWTAMVR Y QN+D +KALILFQEMQ++DGI+PNRISLISLLPAC+S AGLMN
Sbjct: 301 IKRRNIYVWTAMVRGYVQNKDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMN 360

Query: 361 GKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYG 420
           GKQIHGF +RK F+DD SLCNALIDMYSKCGSLE ARKVFESDSF KDTISWTTLISAYG
Sbjct: 361 GKQIHGFAIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFHKDTISWTTLISAYG 420

Query: 421 LHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTA 480
           LHGQGKESIRLYNDM++LGIKPD I VV VLSAC RSGL+ EGLQLY TA+Q+Y +EPTA
Sbjct: 421 LHGQGKESIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTA 480

Query: 481 EICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTE 540
           EICA++VDMLG +GELE+AL+FIK M  EP P VWGALVSASIRYK+Y+MLELAYR L E
Sbjct: 481 EICAVIVDMLGNMGELEQALNFIKTMPLEPGPSVWGALVSASIRYKDYKMLELAYRSLIE 540

Query: 541 LEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADK 600
           LEP+NPSNFISLSNL+ASASRWD+VAELR+TM+ERGLRK+PGCSW+NINTKTHCFHVADK
Sbjct: 541 LEPENPSNFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADK 600

Query: 601 THPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
            HPSSKLIYEVLDHVF  M EP  SDD+EY I
Sbjct: 601 AHPSSKLIYEVLDHVFSTMNEP-ISDDLEYWI 631

[Close]

BLAST of CcUC10G205020.1 vs. NCBI nr
Match: XP_023513452.1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1063.1 bits (2748), Expect = 9.0e-307
Identity = 518/632 (81.96%), Postives = 566/632 (89.56%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGL ISHCYSTLF  +L P   LLH+LQHAIN QS+K IR+SHAQVITHGL
Sbjct: 1   MNLVFVPKPCGLFISHCYSTLFGRDLYPPQRLLHILQHAINQQSQKFIRESHAQVITHGL 60

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           EQN FLITKLISAYS CGDL E +L+F+LVS RTV IWNSLINGYVKNC FHGAF RFNE
Sbjct: 61  EQNNFLITKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNE 120

Query: 121 MQQCNTMPDDFTLSILAKASIELGNV-VGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQQC+ +PDDFTLS LAKAS EL NV +GKSIHGK +RLGF+ DI+VANSLISMYFKYGE
Sbjct: 121 MQQCDIVPDDFTLSTLAKASSELRNVTIGKSIHGKIVRLGFIFDIVVANSLISMYFKYGE 180

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWE-AVRSMQIDGIKPDAFTISS 240
           CKESLKLFDEMPERNSGSWN LLAGYAS +DCFYVKEAW+  VRSMQIDG+KPDAFTISS
Sbjct: 181 CKESLKLFDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISS 240

Query: 241 LLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQ 300
           LLPLCGNP GKL+YGKELHCYIVKNELDLDFGS  HLGCGLIDMYSR N I ASR+VFDQ
Sbjct: 241 LLPLCGNPIGKLNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQ 300

Query: 301 IKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMN 360
           IK RNIYVWTAMVR Y QN+D +KALILFQEMQ++DGI+PNRISLISLLPAC+S AGLMN
Sbjct: 301 IKRRNIYVWTAMVRGYVQNKDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMN 360

Query: 361 GKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYG 420
           GKQIHGF +RK F+DD SLCNALIDMYSKCGSLE ARKVFESDSF KDTISWTTLISAYG
Sbjct: 361 GKQIHGFAIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFHKDTISWTTLISAYG 420

Query: 421 LHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTA 480
           LHGQGKESIRLYNDM++LGIKPD I VV VLSAC RSGL+ EGLQLY TA+Q+Y +EPTA
Sbjct: 421 LHGQGKESIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTA 480

Query: 481 EICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTE 540
           EICA++VDMLG +GELE+AL+FIK M  EP P VWGALVSASIRYK+Y++LELAYR L E
Sbjct: 481 EICAVIVDMLGNMGELEQALNFIKMMPVEPGPSVWGALVSASIRYKDYKILELAYRSLIE 540

Query: 541 LEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADK 600
           LEP+NPSNFISLSNL+ASASRWD+VAELR+TM+ERGLRK+PGCSW+NINTKTHCFHVADK
Sbjct: 541 LEPENPSNFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADK 600

Query: 601 THPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
            HPSSKLIYEVLDHVF  M EP  SDD+EY I
Sbjct: 601 AHPSSKLIYEVLDHVFSTMNEP-ISDDLEYWI 631

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.1e-100
Identity = 201/578 (34.78%), Postives = 331/578 (57.27%), Query Frame = 0


Query: 45  KKCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLING 104
           K  ++Q HA+++  GL+ + FLITKLI A S  GD+     VF+ +    ++ WN++I G
Sbjct: 34  KAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93

Query: 105 YVKNCAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGNV-VGKSIHGKSLRLGFMSD 164
           Y +N  F  A   ++ MQ     PD FT   L KA   L ++ +G+ +H +  RLGF +D
Sbjct: 94  YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153

Query: 165 IIVANSLISMYFKYGECKESLKLFD--EMPERNSGSWNALLAGYASFSDCFYVKEAWEAV 224
           + V N LI++Y K      +  +F+   +PER   SW A+++ YA   +     E +  +
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213

Query: 225 RSMQIDGIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLID 284
           R M    +KPD   + S+L         L  G+ +H  +VK  L+++      L   L  
Sbjct: 214 RKMD---VKPDWVALVSVLN-AFTCLQDLKQGRSIHASVVKMGLEIE----PDLLISLNT 273

Query: 285 MYSRANDIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRI 344
           MY++   +  ++ +FD++KS N+ +W AM+  YA+N  + +A+ +F EM  KD + P+ I
Sbjct: 274 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTI 333

Query: 345 SLISLLPACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESD 404
           S+ S + AC+    L   + ++ +V R ++ DD+ + +ALIDM++KCGS+E AR VF+  
Sbjct: 334 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR- 393

Query: 405 SFCKDTISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEG 464
           +  +D + W+ +I  YGLHG+ +E+I LY  M   G+ P+ +T + +L AC  SG+V EG
Sbjct: 394 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 453

Query: 465 LQLYITAIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASI 524
              +   + +++I P  +  A V+D+LG  G L++A   IK M  +P   VWGAL+SA  
Sbjct: 454 -WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 513

Query: 525 RYKNYEMLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGC 584
           ++++ E+ E A + L  ++P N  +++ LSNL+A+A  WD VAE+R  M+E+GL K  GC
Sbjct: 514 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 573

Query: 585 SWVNINTKTHCFHVADKTHPSSKLIYEVLDHVFIIMKE 620
           SWV +  +   F V DK+HP  + I   ++ +   +KE
Sbjct: 574 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.9e-97
Identity = 212/612 (34.64%), Postives = 330/612 (53.92%), Query Frame = 0


Query: 44  SKKCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLIN 103
           S +C   +HA  +  G   N F+   L++ YS C  L +   VF+ +S+  V  WNS+I 
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201

Query: 104 GYVKNCAFHGAFDRFNEM-QQCNTMPDDFTLSILAKASIELG-NVVGKSIHGKSLRLGFM 163
            Y K      A + F+ M  +    PD+ TL  +      LG + +GK +H  ++    +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261

Query: 164 SDIIVANSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYAS---FSDCFYVKE-- 223
            ++ V N L+ MY K G   E+  +F  M  ++  SWNA++AGY+    F D   + E  
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321

Query: 224 ----------AWEAV-----------------RSMQIDGIKPDAFTISSLLPLCGNPNGK 283
                      W A                  R M   GIKP+  T+ S+L  C +  G 
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV-GA 381

Query: 284 LSYGKELHCYIVKNELDL---DFGSKFHLGCGLIDMYSRANDIIASRYVFDQI--KSRNI 343
           L +GKE+HCY +K  +DL     G +  +   LIDMY++   +  +R +FD +  K R++
Sbjct: 382 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDV 441

Query: 344 YVWTAMVRAYAQNEDSEKALILFQEMQIKD-GIVPNRISLISLLPACSSHAGLMNGKQIH 403
             WT M+  Y+Q+ D+ KAL L  EM  +D    PN  ++   L AC+S A L  GKQIH
Sbjct: 442 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH 501

Query: 404 GFVVRKEFHD-DISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGLHGQ 463
            + +R + +   + + N LIDMY+KCGS+ +AR VF+ +   K+ ++WT+L++ YG+HG 
Sbjct: 502 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD-NMMAKNEVTWTSLMTGYGMHGY 561

Query: 464 GKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAEICA 523
           G+E++ ++++M  +G K D +T++ VL AC  SG++++G++ +      + + P  E  A
Sbjct: 562 GEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYA 621

Query: 524 IVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTELEPD 583
            +VD+LG  G L  AL  I+ M  EP P VW A +S    +   E+ E A   +TEL  +
Sbjct: 622 CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN 681

Query: 584 NPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKTHPS 614
           +  ++  LSNL+A+A RW  V  +R+ MR +G++K PGCSWV     T  F V DKTHP 
Sbjct: 682 HDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPH 741

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-94
Identity = 198/572 (34.62%), Postives = 308/572 (53.85%), Query Frame = 0


Query: 49  RQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKN 108
           ++ H  V+ +G E +  ++  LI+ Y  CGD+K   L+F+ +  R +  WN++I+GY +N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275

Query: 109 CAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVA 168
              H   + F  M+  +  PD  TL+ +  A   LG+  +G+ IH   +  GF  DI V 
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335

Query: 169 NSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQID 228
           NSL  MY   G  +E+ KLF  M  ++  SW  +++GY      F   +A +  R M  D
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY---EYNFLPDKAIDTYRMMDQD 395

Query: 229 GIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRAN 288
            +KPD  T++++L  C    G L  G ELH   +K  L     S   +   LI+MYS+  
Sbjct: 396 SVKPDEITVAAVLSACAT-LGDLDTGVELHKLAIKARLI----SYVIVANNLINMYSKCK 455

Query: 289 DIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLL 348
            I  +  +F  I  +N+  WT+++     N    +ALI  ++M++   + PN I+L + L
Sbjct: 456 CIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAAL 515

Query: 349 PACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDT 408
            AC+    LM GK+IH  V+R     D  L NAL+DMY +CG +  A   F S    KD 
Sbjct: 516 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK--KDV 575

Query: 409 ISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYIT 468
            SW  L++ Y   GQG   + L++ MV+  ++PD IT +++L  C +S +V +GL +Y +
Sbjct: 576 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFS 635

Query: 469 AIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYE 528
            +++Y + P  +  A VVD+LG  GEL+ A  FI++M   P P VWGAL++A   +   +
Sbjct: 636 KMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 695

Query: 529 MLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNIN 588
           + EL+ + + EL+  +   +I L NL+A   +W  VA++R  M+E GL    GCSWV + 
Sbjct: 696 LGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 755

Query: 589 TKTHCFHVADKTHPSSKLIYEVLDHVFIIMKE 620
            K H F   DK HP +K I  VL+  +  M E
Sbjct: 756 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.3e-94
Identity = 210/623 (33.71%), Postives = 330/623 (52.97%), Query Frame = 0


Query: 35  LLQHAINHQSKKCIRQSHAQVI-THGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIR 94
           L+++    +SK   +Q HAQ I T  L   +  I  +IS Y+    L E  L+F  +   
Sbjct: 11  LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSP 70

Query: 95  TVYIWNSLINGYVKNCAFHGAFDRFNEMQQCNTMPDDFTL-SILAKASIELGNVVGKSIH 154
            V  W S+I  +     F  A   F EM+     PD     S+L   ++ +    G+S+H
Sbjct: 71  PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 130

Query: 155 GKSLRLGFMSDIIVANSLISMYFK---YGECKESLKLFDEMPER--NSG----------- 214
           G  +RLG   D+   N+L++MY K    G       +FDEMP+R  NSG           
Sbjct: 131 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 190

Query: 215 --------------------SWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTI 274
                               S+N ++AGYA        ++A   VR M    +KPD+FT+
Sbjct: 191 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG---MYEDALRMVREMGTTDLKPDSFTL 250

Query: 275 SSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVF 334
           SS+LP+       +  GKE+H Y+++  +D D     ++G  L+DMY+++  I  S  VF
Sbjct: 251 SSVLPIFSEYVDVIK-GKEIHGYVIRKGIDSD----VYIGSSLVDMYAKSARIEDSERVF 310

Query: 335 DQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGL 394
            ++  R+   W ++V  Y QN    +AL LF++M +   + P  ++  S++PAC+  A L
Sbjct: 311 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATL 370

Query: 395 MNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISA 454
             GKQ+HG+V+R  F  +I + +AL+DMYSKCG+++ ARK+F+  +   D +SWT +I  
Sbjct: 371 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMG 430

Query: 455 YGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEP 514
           + LHG G E++ L+ +M   G+KP+ +  VAVL+AC   GLV+E    + +  + Y +  
Sbjct: 431 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 490

Query: 515 TAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFL 574
             E  A V D+LG  G+LE A +FI +M  EP+  VW  L+S+   +KN E+ E     +
Sbjct: 491 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 550

Query: 575 TELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVA 620
             ++ +N   ++ + N++AS  RW  +A+LR  MR++GLRK P CSW+ +  KTH F   
Sbjct: 551 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 610

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy Swiss-Prot
Match: P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.7e-93
Identity = 198/575 (34.43%), Postives = 304/575 (52.87%), Query Frame = 0


Query: 46  KCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGY 105
           + +R  H+++I   L  N+ L  KL+ AY+   D+     VF+ +  R V I N +I  Y
Sbjct: 56  RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115

Query: 106 VKNCAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDI 165
           V N  +      F  M  CN  PD +T   + KA    G  V+G+ IHG + ++G  S +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175

Query: 166 IVANSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSM 225
            V N L+SMY K G   E+  + DEM  R+  SWN+L+ GYA         +A E  R M
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ---RFDDALEVCREM 235

Query: 226 QIDGIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYS 285
           +   I  DA T++SLLP   N                                      +
Sbjct: 236 ESVKISHDAGTMASLLPAVSN--------------------------------------T 295

Query: 286 RANDIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLI 345
              +++  + +F ++  +++  W  M+  Y +N    +A+ L+  M+  DG  P+ +S+ 
Sbjct: 296 TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSIT 355

Query: 346 SLLPACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFC 405
           S+LPAC   + L  GK+IHG++ RK+   ++ L NALIDMY+KCG LE AR VFE+    
Sbjct: 356 SVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-S 415

Query: 406 KDTISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQL 465
           +D +SWT +ISAYG  G+G +++ L++ + + G+ PD I  V  L+AC  +GL+ EG   
Sbjct: 416 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 475

Query: 466 YITAIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYK 525
           +      Y+I P  E  A +VD+LG  G+++ A  FI+ M+ EP+  VWGAL+ A   + 
Sbjct: 476 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 535

Query: 526 NYEMLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWV 585
           + ++  LA   L +L P+    ++ LSN++A A RW+ V  +RN M+ +GL+K PG S V
Sbjct: 536 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 587

Query: 586 NINTKTHCFHVADKTHPSSKLIYEVLDHVFIIMKE 620
            +N   H F V D++HP S  IY  LD +   MKE
Sbjct: 596 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy TrEMBL
Match: A0A1S4DYI5 (pentatricopeptide repeat-containing protein At3g12770-like OS=Cucumis melo OX=3656 GN=LOC103492869 PE=4 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 526/631 (83.36%), Postives = 573/631 (90.81%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGLLIS CYSTL R +LCPS CLLH LQHAINHQS+K I QSHAQVIT GL
Sbjct: 1   MNLVFVPKPCGLLISRCYSTLSRPDLCPSRCLLHFLQHAINHQSQKRIHQSHAQVITQGL 60

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           EQN FLITKL+SAYS CGDLKEL+L+F+L SI+TV+IWNSLI+GYVKN  FHG F RFNE
Sbjct: 61  EQNPFLITKLLSAYSSCGDLKELNLIFDLASIKTVHIWNSLISGYVKNGMFHGVFGRFNE 120

Query: 121 MQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQ+CN +PDDFTLSILAKAS ELGN VVGKSIHGKSLRLG +SDIIVANSLISMYFKYGE
Sbjct: 121 MQKCNIVPDDFTLSILAKASNELGNVVVGKSIHGKSLRLGLISDIIVANSLISMYFKYGE 180

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISSL 240
           CKESLKLF+EMPERNSGSWN LLAGYASFSDCFY KEAWEAVR+MQ+DGIKPDAFTISSL
Sbjct: 181 CKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYAKEAWEAVRNMQMDGIKPDAFTISSL 240

Query: 241 LPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQI 300
           L  CG+PNGKLSYGKELHCYIVKN+LDLD GSKFH+ CGLIDMYSR N+ IASRYVFDQI
Sbjct: 241 LHFCGHPNGKLSYGKELHCYIVKNKLDLDSGSKFHISCGLIDMYSRENNTIASRYVFDQI 300

Query: 301 KSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMNG 360
           KSRNIYVWTAMV  YAQNED +KALILFQEMQ+KDGIVPN+ISLISLLPACS HAGL NG
Sbjct: 301 KSRNIYVWTAMVSGYAQNEDPDKALILFQEMQMKDGIVPNKISLISLLPACSLHAGLTNG 360

Query: 361 KQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGL 420
           KQIHG+ VRKE+ DD++LCNALIDMYSKCGSLE+A+ VFE+DSFCKD ISWTT+I AYGL
Sbjct: 361 KQIHGYAVRKEYLDDVTLCNALIDMYSKCGSLESAKNVFETDSFCKDVISWTTIILAYGL 420

Query: 421 HGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAE 480
           HG  +ESIRLYNDMVEL IKPD ITVVAVLSACGR GLV+EGLQLY TA+QE++IEPTAE
Sbjct: 421 HGLAEESIRLYNDMVELSIKPDQITVVAVLSACGRCGLVSEGLQLYNTAVQEHKIEPTAE 480

Query: 481 ICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTEL 540
           ICA VVDMLG IGEL++A SFIK M  EP P VWGALVSASIRY+NYEMLELAYR+L EL
Sbjct: 481 ICAAVVDMLGNIGELDQAFSFIKTMMVEPGPSVWGALVSASIRYRNYEMLELAYRYLVEL 540

Query: 541 EPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKT 600
           EPDNPSNFISLSNL+ASASRWD+VAELRNTM++RGLRK PGCSW+NINT THCFHVAD+T
Sbjct: 541 EPDNPSNFISLSNLYASASRWDMVAELRNTMKKRGLRKTPGCSWININTTTHCFHVADRT 600

Query: 601 HPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
           HP S LIY VLDHVFI+MKEP CSDDIE+LI
Sbjct: 601 HPISNLIYGVLDHVFIVMKEPHCSDDIEFLI 631

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy TrEMBL
Match: A0A5A7UUQ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00640 PE=4 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 526/631 (83.36%), Postives = 573/631 (90.81%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGLLIS CYSTL R +LCPS CLLH LQHAINHQS+K I QSHAQVIT GL
Sbjct: 1   MNLVFVPKPCGLLISRCYSTLSRPDLCPSRCLLHFLQHAINHQSQKRIHQSHAQVITQGL 60

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           EQN FLITKL+SAYS CGDLKEL+L+F+L SI+TV+IWNSLI+GYVKN  FHG F RFNE
Sbjct: 61  EQNPFLITKLLSAYSSCGDLKELNLIFDLASIKTVHIWNSLISGYVKNGMFHGVFGRFNE 120

Query: 121 MQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQ+CN +PDDFTLSILAKAS ELGN VVGKSIHGKSLRLG +SDIIVANSLISMYFKYGE
Sbjct: 121 MQKCNIVPDDFTLSILAKASNELGNVVVGKSIHGKSLRLGLISDIIVANSLISMYFKYGE 180

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISSL 240
           CKESLKLF+EMPERNSGSWN LLAGYASFSDCFY KEAWEAVR+MQ+DGIKPDAFTISSL
Sbjct: 181 CKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYAKEAWEAVRNMQMDGIKPDAFTISSL 240

Query: 241 LPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQI 300
           L  CG+PNGKLSYGKELHCYIVKN+LDLD GSKFH+ CGLIDMYSR N+ IASRYVFDQI
Sbjct: 241 LHFCGHPNGKLSYGKELHCYIVKNKLDLDSGSKFHISCGLIDMYSRENNTIASRYVFDQI 300

Query: 301 KSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMNG 360
           KSRNIYVWTAMV  YAQNED +KALILFQEMQ+KDGIVPN+ISLISLLPACS HAGL NG
Sbjct: 301 KSRNIYVWTAMVSGYAQNEDPDKALILFQEMQMKDGIVPNKISLISLLPACSLHAGLTNG 360

Query: 361 KQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGL 420
           KQIHG+ VRKE+ DD++LCNALIDMYSKCGSLE+A+ VFE+DSFCKD ISWTT+I AYGL
Sbjct: 361 KQIHGYAVRKEYLDDVTLCNALIDMYSKCGSLESAKNVFETDSFCKDVISWTTIILAYGL 420

Query: 421 HGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAE 480
           HG  +ESIRLYNDMVEL IKPD ITVVAVLSACGR GLV+EGLQLY TA+QE++IEPTAE
Sbjct: 421 HGLAEESIRLYNDMVELSIKPDQITVVAVLSACGRCGLVSEGLQLYNTAVQEHKIEPTAE 480

Query: 481 ICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTEL 540
           ICA VVDMLG IGEL++A SFIK M  EP P VWGALVSASIRY+NYEMLELAYR+L EL
Sbjct: 481 ICAAVVDMLGNIGELDQAFSFIKTMMVEPGPSVWGALVSASIRYRNYEMLELAYRYLVEL 540

Query: 541 EPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKT 600
           EPDNPSNFISLSNL+ASASRWD+VAELRNTM++RGLRK PGCSW+NINT THCFHVAD+T
Sbjct: 541 EPDNPSNFISLSNLYASASRWDMVAELRNTMKKRGLRKTPGCSWININTTTHCFHVADRT 600

Query: 601 HPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
           HP S LIY VLDHVFI+MKEP CSDDIE+LI
Sbjct: 601 HPISNLIYGVLDHVFIVMKEPHCSDDIEFLI 631

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy TrEMBL
Match: A0A6J1KRX1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497703 PE=4 SV=1)

HSP 1 Score: 1066.2 bits (2756), Expect = 5.2e-308
Identity = 520/632 (82.28%), Postives = 567/632 (89.72%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNLCPSHCLLHLLQHAINHQSKKCIRQSHAQVITHGL 60
           MNLVFVPKPCGL ISHCYSTLF  +L PS  LLH+LQHA+N QS+K IR+SHAQVITHGL
Sbjct: 1   MNLVFVPKPCGLFISHCYSTLFGRDLYPSQRLLHILQHAVNQQSQKFIRESHAQVITHGL 60

Query: 61  EQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFNE 120
           EQN FLITKLISAYS CGDL E +L+F+LVS RTV IWNSLINGYVKNC FHGAF RFNE
Sbjct: 61  EQNNFLITKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNE 120

Query: 121 MQQCNTMPDDFTLSILAKASIELGNV-VGKSIHGKSLRLGFMSDIIVANSLISMYFKYGE 180
           MQQC+ +PDDFTLS LAKAS EL NV VGKSIHGK +RLGF+ DI+VANSLISMYFKYGE
Sbjct: 121 MQQCDIVPDDFTLSTLAKASSELRNVTVGKSIHGKIVRLGFIFDIVVANSLISMYFKYGE 180

Query: 181 CKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWE-AVRSMQIDGIKPDAFTISS 240
           CKESLKLFDEMPERNSGSWN LLAGYAS +DCFYVKEAW+  VRSMQIDG+KPDAFTISS
Sbjct: 181 CKESLKLFDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISS 240

Query: 241 LLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQ 300
           LLPLCGNP GKL+YGKELHCYIVKNELDLDFGS  HLGCGLIDMYSR N I ASR+VFDQ
Sbjct: 241 LLPLCGNPIGKLNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQ 300

Query: 301 IKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMN 360
           IK RNIYVWTAMVR Y QN+D +KALILFQEMQ++DGI+PNRISLISLLPAC+S AGLMN
Sbjct: 301 IKRRNIYVWTAMVRGYVQNKDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMN 360

Query: 361 GKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYG 420
           GKQIHGF +RK F+DD SLCNALIDMYSKCGSLE ARKVFESDSF KDTISWTTLISAYG
Sbjct: 361 GKQIHGFAIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFHKDTISWTTLISAYG 420

Query: 421 LHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTA 480
           LHGQGKESIRLYNDM++LGIKPD I VV VLSAC RSGL+ EGLQLY TA+Q+Y +EPTA
Sbjct: 421 LHGQGKESIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTA 480

Query: 481 EICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTE 540
           EICA++VDMLG +GELE+AL+FIK M  EP P VWGALVSASIRYK+Y+MLELAYR L E
Sbjct: 481 EICAVIVDMLGNMGELEQALNFIKTMPLEPGPSVWGALVSASIRYKDYKMLELAYRSLIE 540

Query: 541 LEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADK 600
           LEP+NPSNFISLSNL+ASASRWD+VAELR+TM+ERGLRK+PGCSW+NINTKTHCFHVADK
Sbjct: 541 LEPENPSNFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADK 600

Query: 601 THPSSKLIYEVLDHVFIIMKEPCCSDDIEYLI 631
            HPSSKLIYEVLDHVF  M EP  SDD+EY I
Sbjct: 601 AHPSSKLIYEVLDHVFSTMNEP-ISDDLEYWI 631

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy TrEMBL
Match: A0A6J1CPK8 (pentatricopeptide repeat-containing protein At3g12770-like OS=Momordica charantia OX=3673 GN=LOC111013411 PE=4 SV=1)

HSP 1 Score: 1032.3 bits (2668), Expect = 8.3e-298
Identity = 496/599 (82.80%), Postives = 544/599 (90.82%), Query Frame = 0


Query: 32  LLHLLQHAINHQSKKCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVS 91
           LLH LQHAINHQS+K   QSHAQVIT GLEQN+FLITKLISAYSICG+LKE +L+F+LVS
Sbjct: 68  LLHFLQHAINHQSQKLTCQSHAQVITRGLEQNSFLITKLISAYSICGNLKESTLIFDLVS 127

Query: 92  IRTVYIWNSLINGYVKNCAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGNV-VGKS 151
             T+Y WNSLIN +VKN  FHGAFDRF EMQQC+ +PD FTLS LAKAS E+GNV VGK 
Sbjct: 128 TITIYTWNSLINAFVKNYVFHGAFDRFKEMQQCDIIPDHFTLSTLAKASTEIGNVAVGKL 187

Query: 152 IHGKSLRLGFMSDIIVANSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYASFSD 211
           IHGKS+RLGFM DI+VANSL+SMYFKYGEC+ SLKLFDEMPERNS SWN LLAGYAS SD
Sbjct: 188 IHGKSIRLGFMLDIVVANSLVSMYFKYGECEASLKLFDEMPERNSASWNVLLAGYASSSD 247

Query: 212 CFYVKEAWEAVRSMQIDGIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFG 271
           CFYVKE WE VRSMQ DGIKPDAFTISS LPLCG+P GKLSYGKELHCY+VKNELDLDFG
Sbjct: 248 CFYVKEVWEVVRSMQTDGIKPDAFTISSTLPLCGDPIGKLSYGKELHCYMVKNELDLDFG 307

Query: 272 SKFHLGCGLIDMYSRANDIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEM 331
           S  HLGC LIDMYSR N +IASRYVFDQIKS+NIYVWTAMVR Y QNED +KALILFQEM
Sbjct: 308 SNVHLGCCLIDMYSRDNKVIASRYVFDQIKSKNIYVWTAMVRGYVQNEDPDKALILFQEM 367

Query: 332 QIKDGIVPNRISLISLLPACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGS 391
           Q+KDGIVPNRISLISLLPACSSHAGLMNGKQIHGF +RKEF+DD+SLCNALIDMYSKCGS
Sbjct: 368 QMKDGIVPNRISLISLLPACSSHAGLMNGKQIHGFAIRKEFNDDVSLCNALIDMYSKCGS 427

Query: 392 LENARKVFESDSFCKDTISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLS 451
           LENAR+VFESDSFCKD ISWTTLISA+GLHG+GKE+IRLYNDMVELGIKPDPIT+V VLS
Sbjct: 428 LENARRVFESDSFCKDAISWTTLISAFGLHGRGKEAIRLYNDMVELGIKPDPITIVGVLS 487

Query: 452 ACGRSGLVNEGLQLYITAIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSP 511
           ACGRSGLVNEGLQ+Y T +QE+ I+PTAEICA+VVD+LG+IGELE+ALSFIK M  EP P
Sbjct: 488 ACGRSGLVNEGLQIYSTVVQEFGIKPTAEICAVVVDLLGSIGELEQALSFIKTMLVEPGP 547

Query: 512 GVWGALVSASIRYKNYEMLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTM 571
           GVWGALVSAS++Y+NYEMLELAYR L ELEP+N SNFISLSNL+ASASRWDVVAELRNTM
Sbjct: 548 GVWGALVSASVKYRNYEMLELAYRSLVELEPENASNFISLSNLYASASRWDVVAELRNTM 607

Query: 572 RERGLRKAPGCSWVNINTKTHCFHVADKTHPSSKLIYEVLDHVFIIMKEPCCSDDIEYL 630
           +ERGLRKA GCSW++INTKTHCFHVADK HPSSKLIY+VLDHVFIIMKEP C DD+ Y+
Sbjct: 608 KERGLRKAAGCSWIDINTKTHCFHVADKAHPSSKLIYQVLDHVFIIMKEPHCYDDLGYV 666

[Close]

BLAST of CcUC10G205020.1 vs. ExPASy TrEMBL
Match: A0A0A0K740 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375810 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 7.8e-280
Identity = 479/582 (82.30%), Postives = 524/582 (90.03%), Query Frame = 0


Query: 1   MNLVFVPKPCGLLISHCYSTLFRSNL-CPSHCLLHLLQHAINHQSKKCIRQSHAQVITHG 60
           MNLVFVPKPCGLLIS CYSTL R +L  PS  LLH LQHAINH+S+K I QSHA+VITHG
Sbjct: 1   MNLVFVPKPCGLLISRCYSTLSRPDLISPSPSLLHFLQHAINHRSQKRIHQSHARVITHG 60

Query: 61  LEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKNCAFHGAFDRFN 120
           L QNTFLITKLISAYSICGDLKEL+L+F+L SI+TVYIWNSLI+GYVK   FHGAF RFN
Sbjct: 61  LGQNTFLITKLISAYSICGDLKELNLIFDLASIKTVYIWNSLISGYVKKGMFHGAFGRFN 120

Query: 121 EMQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVANSLISMYFKYG 180
           EMQ+CN +PDDFTLSILAKAS ELGN VV KSIHGKSLRLGF+SDIIVANSL+SMYFKYG
Sbjct: 121 EMQKCNIVPDDFTLSILAKASNELGNVVVAKSIHGKSLRLGFISDIIVANSLMSMYFKYG 180

Query: 181 ECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTISS 240
           ECKESLKLF+EMPERNSGSWN LLAGYASFSDCFYVKEAWEAVR+MQ+DGIKPDAFTISS
Sbjct: 181 ECKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYVKEAWEAVRNMQLDGIKPDAFTISS 240

Query: 241 LLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVFDQ 300
           LL  CG+PNGKLSYGKELHCYIVKNELDLD GSKFH+GCGLI+MYSR N+ IASRYVFDQ
Sbjct: 241 LLQFCGHPNGKLSYGKELHCYIVKNELDLDSGSKFHIGCGLIEMYSRENNTIASRYVFDQ 300

Query: 301 IKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGLMN 360
           IKSRNIYVWTAMV  YAQNED +KALILF EMQ+KDGIVPN++SL+SLLPACS HAGLMN
Sbjct: 301 IKSRNIYVWTAMVSGYAQNEDPDKALILFHEMQMKDGIVPNKVSLVSLLPACSLHAGLMN 360

Query: 361 GKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYG 420
           GKQIHG+ +RKE+H+D++LCNALID YSKCGSLE A+KVFESDSFCKDTISWTTLISAYG
Sbjct: 361 GKQIHGYAIRKEYHNDVTLCNALIDTYSKCGSLEYAKKVFESDSFCKDTISWTTLISAYG 420

Query: 421 LHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTA 480
           L+G  ++SIRLYNDMVE  IKPD ITV+AVLSACGRSGLVNEGLQLY TA+QE++IEPTA
Sbjct: 421 LYGLAEKSIRLYNDMVERSIKPDQITVLAVLSACGRSGLVNEGLQLYNTAVQEHKIEPTA 480

Query: 481 EICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTE 540
           EICA VV MLG  GELE+A SFI  M  EP PGVWGALVSASI+Y+N EMLELAYR+L E
Sbjct: 481 EICAAVVYMLGNSGELEQAFSFISTMMVEPGPGVWGALVSASIKYRNNEMLELAYRYLVE 540

Query: 541 LEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPG 581
           LEPDNPSNFISLSNL+ASASRWD VAELRNTM+ER   K  G
Sbjct: 541 LEPDNPSNFISLSNLYASASRWDAVAELRNTMKERENVKVVG 582

[Close]

BLAST of CcUC10G205020.1 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 367.5 bits (942), Expect = 2.2e-101
Identity = 201/578 (34.78%), Postives = 331/578 (57.27%), Query Frame = 0


Query: 45  KKCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLING 104
           K  ++Q HA+++  GL+ + FLITKLI A S  GD+     VF+ +    ++ WN++I G
Sbjct: 34  KAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93

Query: 105 YVKNCAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGNV-VGKSIHGKSLRLGFMSD 164
           Y +N  F  A   ++ MQ     PD FT   L KA   L ++ +G+ +H +  RLGF +D
Sbjct: 94  YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153

Query: 165 IIVANSLISMYFKYGECKESLKLFD--EMPERNSGSWNALLAGYASFSDCFYVKEAWEAV 224
           + V N LI++Y K      +  +F+   +PER   SW A+++ YA   +     E +  +
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213

Query: 225 RSMQIDGIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLID 284
           R M    +KPD   + S+L         L  G+ +H  +VK  L+++      L   L  
Sbjct: 214 RKMD---VKPDWVALVSVLN-AFTCLQDLKQGRSIHASVVKMGLEIE----PDLLISLNT 273

Query: 285 MYSRANDIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRI 344
           MY++   +  ++ +FD++KS N+ +W AM+  YA+N  + +A+ +F EM  KD + P+ I
Sbjct: 274 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTI 333

Query: 345 SLISLLPACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESD 404
           S+ S + AC+    L   + ++ +V R ++ DD+ + +ALIDM++KCGS+E AR VF+  
Sbjct: 334 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR- 393

Query: 405 SFCKDTISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEG 464
           +  +D + W+ +I  YGLHG+ +E+I LY  M   G+ P+ +T + +L AC  SG+V EG
Sbjct: 394 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 453

Query: 465 LQLYITAIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASI 524
              +   + +++I P  +  A V+D+LG  G L++A   IK M  +P   VWGAL+SA  
Sbjct: 454 -WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 513

Query: 525 RYKNYEMLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGC 584
           ++++ E+ E A + L  ++P N  +++ LSNL+A+A  WD VAE+R  M+E+GL K  GC
Sbjct: 514 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 573

Query: 585 SWVNINTKTHCFHVADKTHPSSKLIYEVLDHVFIIMKE 620
           SWV +  +   F V DK+HP  + I   ++ +   +KE
Sbjct: 574 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600

[Close]

BLAST of CcUC10G205020.1 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 358.2 bits (918), Expect = 1.3e-98
Identity = 212/612 (34.64%), Postives = 330/612 (53.92%), Query Frame = 0


Query: 44  SKKCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLIN 103
           S +C   +HA  +  G   N F+   L++ YS C  L +   VF+ +S+  V  WNS+I 
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201

Query: 104 GYVKNCAFHGAFDRFNEM-QQCNTMPDDFTLSILAKASIELG-NVVGKSIHGKSLRLGFM 163
            Y K      A + F+ M  +    PD+ TL  +      LG + +GK +H  ++    +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261

Query: 164 SDIIVANSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYAS---FSDCFYVKE-- 223
            ++ V N L+ MY K G   E+  +F  M  ++  SWNA++AGY+    F D   + E  
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321

Query: 224 ----------AWEAV-----------------RSMQIDGIKPDAFTISSLLPLCGNPNGK 283
                      W A                  R M   GIKP+  T+ S+L  C +  G 
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV-GA 381

Query: 284 LSYGKELHCYIVKNELDL---DFGSKFHLGCGLIDMYSRANDIIASRYVFDQI--KSRNI 343
           L +GKE+HCY +K  +DL     G +  +   LIDMY++   +  +R +FD +  K R++
Sbjct: 382 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDV 441

Query: 344 YVWTAMVRAYAQNEDSEKALILFQEMQIKD-GIVPNRISLISLLPACSSHAGLMNGKQIH 403
             WT M+  Y+Q+ D+ KAL L  EM  +D    PN  ++   L AC+S A L  GKQIH
Sbjct: 442 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH 501

Query: 404 GFVVRKEFHD-DISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISAYGLHGQ 463
            + +R + +   + + N LIDMY+KCGS+ +AR VF+ +   K+ ++WT+L++ YG+HG 
Sbjct: 502 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD-NMMAKNEVTWTSLMTGYGMHGY 561

Query: 464 GKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEPTAEICA 523
           G+E++ ++++M  +G K D +T++ VL AC  SG++++G++ +      + + P  E  A
Sbjct: 562 GEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYA 621

Query: 524 IVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFLTELEPD 583
            +VD+LG  G L  AL  I+ M  EP P VW A +S    +   E+ E A   +TEL  +
Sbjct: 622 CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN 681

Query: 584 NPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVADKTHPS 614
           +  ++  LSNL+A+A RW  V  +R+ MR +G++K PGCSWV     T  F V DKTHP 
Sbjct: 682 HDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPH 741

[Close]

BLAST of CcUC10G205020.1 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 348.6 bits (893), Expect = 1.1e-95
Identity = 198/572 (34.62%), Postives = 308/572 (53.85%), Query Frame = 0


Query: 49  RQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGYVKN 108
           ++ H  V+ +G E +  ++  LI+ Y  CGD+K   L+F+ +  R +  WN++I+GY +N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275

Query: 109 CAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDIIVA 168
              H   + F  M+  +  PD  TL+ +  A   LG+  +G+ IH   +  GF  DI V 
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335

Query: 169 NSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSMQID 228
           NSL  MY   G  +E+ KLF  M  ++  SW  +++GY      F   +A +  R M  D
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY---EYNFLPDKAIDTYRMMDQD 395

Query: 229 GIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRAN 288
            +KPD  T++++L  C    G L  G ELH   +K  L     S   +   LI+MYS+  
Sbjct: 396 SVKPDEITVAAVLSACAT-LGDLDTGVELHKLAIKARLI----SYVIVANNLINMYSKCK 455

Query: 289 DIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLL 348
            I  +  +F  I  +N+  WT+++     N    +ALI  ++M++   + PN I+L + L
Sbjct: 456 CIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAAL 515

Query: 349 PACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDT 408
            AC+    LM GK+IH  V+R     D  L NAL+DMY +CG +  A   F S    KD 
Sbjct: 516 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK--KDV 575

Query: 409 ISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYIT 468
            SW  L++ Y   GQG   + L++ MV+  ++PD IT +++L  C +S +V +GL +Y +
Sbjct: 576 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFS 635

Query: 469 AIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYE 528
            +++Y + P  +  A VVD+LG  GEL+ A  FI++M   P P VWGAL++A   +   +
Sbjct: 636 KMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 695

Query: 529 MLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNIN 588
           + EL+ + + EL+  +   +I L NL+A   +W  VA++R  M+E GL    GCSWV + 
Sbjct: 696 LGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 755

Query: 589 TKTHCFHVADKTHPSSKLIYEVLDHVFIIMKE 620
            K H F   DK HP +K I  VL+  +  M E
Sbjct: 756 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE 774

[Close]

BLAST of CcUC10G205020.1 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 347.4 bits (890), Expect = 2.4e-95
Identity = 210/623 (33.71%), Postives = 330/623 (52.97%), Query Frame = 0


Query: 35  LLQHAINHQSKKCIRQSHAQVI-THGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIR 94
           L+++    +SK   +Q HAQ I T  L   +  I  +IS Y+    L E  L+F  +   
Sbjct: 11  LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSP 70

Query: 95  TVYIWNSLINGYVKNCAFHGAFDRFNEMQQCNTMPDDFTL-SILAKASIELGNVVGKSIH 154
            V  W S+I  +     F  A   F EM+     PD     S+L   ++ +    G+S+H
Sbjct: 71  PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 130

Query: 155 GKSLRLGFMSDIIVANSLISMYFK---YGECKESLKLFDEMPER--NSG----------- 214
           G  +RLG   D+   N+L++MY K    G       +FDEMP+R  NSG           
Sbjct: 131 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 190

Query: 215 --------------------SWNALLAGYASFSDCFYVKEAWEAVRSMQIDGIKPDAFTI 274
                               S+N ++AGYA        ++A   VR M    +KPD+FT+
Sbjct: 191 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG---MYEDALRMVREMGTTDLKPDSFTL 250

Query: 275 SSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYSRANDIIASRYVF 334
           SS+LP+       +  GKE+H Y+++  +D D     ++G  L+DMY+++  I  S  VF
Sbjct: 251 SSVLPIFSEYVDVIK-GKEIHGYVIRKGIDSD----VYIGSSLVDMYAKSARIEDSERVF 310

Query: 335 DQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLISLLPACSSHAGL 394
            ++  R+   W ++V  Y QN    +AL LF++M +   + P  ++  S++PAC+  A L
Sbjct: 311 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATL 370

Query: 395 MNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFCKDTISWTTLISA 454
             GKQ+HG+V+R  F  +I + +AL+DMYSKCG+++ ARK+F+  +   D +SWT +I  
Sbjct: 371 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMG 430

Query: 455 YGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQLYITAIQEYEIEP 514
           + LHG G E++ L+ +M   G+KP+ +  VAVL+AC   GLV+E    + +  + Y +  
Sbjct: 431 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 490

Query: 515 TAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYKNYEMLELAYRFL 574
             E  A V D+LG  G+LE A +FI +M  EP+  VW  L+S+   +KN E+ E     +
Sbjct: 491 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 550

Query: 575 TELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWVNINTKTHCFHVA 620
             ++ +N   ++ + N++AS  RW  +A+LR  MR++GLRK P CSW+ +  KTH F   
Sbjct: 551 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 610

[Close]

BLAST of CcUC10G205020.1 vs. TAIR 10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 344.0 bits (881), Expect = 2.6e-94
Identity = 198/575 (34.43%), Postives = 304/575 (52.87%), Query Frame = 0


Query: 46  KCIRQSHAQVITHGLEQNTFLITKLISAYSICGDLKELSLVFNLVSIRTVYIWNSLINGY 105
           + +R  H+++I   L  N+ L  KL+ AY+   D+     VF+ +  R V I N +I  Y
Sbjct: 56  RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115

Query: 106 VKNCAFHGAFDRFNEMQQCNTMPDDFTLSILAKASIELGN-VVGKSIHGKSLRLGFMSDI 165
           V N  +      F  M  CN  PD +T   + KA    G  V+G+ IHG + ++G  S +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175

Query: 166 IVANSLISMYFKYGECKESLKLFDEMPERNSGSWNALLAGYASFSDCFYVKEAWEAVRSM 225
            V N L+SMY K G   E+  + DEM  R+  SWN+L+ GYA         +A E  R M
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ---RFDDALEVCREM 235

Query: 226 QIDGIKPDAFTISSLLPLCGNPNGKLSYGKELHCYIVKNELDLDFGSKFHLGCGLIDMYS 285
           +   I  DA T++SLLP   N                                      +
Sbjct: 236 ESVKISHDAGTMASLLPAVSN--------------------------------------T 295

Query: 286 RANDIIASRYVFDQIKSRNIYVWTAMVRAYAQNEDSEKALILFQEMQIKDGIVPNRISLI 345
              +++  + +F ++  +++  W  M+  Y +N    +A+ L+  M+  DG  P+ +S+ 
Sbjct: 296 TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSIT 355

Query: 346 SLLPACSSHAGLMNGKQIHGFVVRKEFHDDISLCNALIDMYSKCGSLENARKVFESDSFC 405
           S+LPAC   + L  GK+IHG++ RK+   ++ L NALIDMY+KCG LE AR VFE+    
Sbjct: 356 SVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-S 415

Query: 406 KDTISWTTLISAYGLHGQGKESIRLYNDMVELGIKPDPITVVAVLSACGRSGLVNEGLQL 465
           +D +SWT +ISAYG  G+G +++ L++ + + G+ PD I  V  L+AC  +GL+ EG   
Sbjct: 416 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 475

Query: 466 YITAIQEYEIEPTAEICAIVVDMLGTIGELERALSFIKRMTAEPSPGVWGALVSASIRYK 525
           +      Y+I P  E  A +VD+LG  G+++ A  FI+ M+ EP+  VWGAL+ A   + 
Sbjct: 476 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 535

Query: 526 NYEMLELAYRFLTELEPDNPSNFISLSNLHASASRWDVVAELRNTMRERGLRKAPGCSWV 585
           + ++  LA   L +L P+    ++ LSN++A A RW+ V  +RN M+ +GL+K PG S V
Sbjct: 536 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 587

Query: 586 NINTKTHCFHVADKTHPSSKLIYEVLDHVFIIMKE 620
            +N   H F V D++HP S  IY  LD +   MKE
Sbjct: 596 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587

The following BLAST results are available for this feature:

BLAST of CcUC10G205020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899569.1	0.0e+00	90.17	pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa...	[more]
XP_016901032.1	0.0e+00	83.36	PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Cucumis m...	[more]
XP_011659256.1	0.0e+00	82.91	pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucumis sativu...	[more]
XP_023004361.1	1.1e-307	82.28	pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita...	[more]
XP_023513452.1	9.0e-307	81.96	pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita...	[more]

BLAST of CcUC10G205020.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTV8	3.1e-100	34.78	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9LFL5	1.9e-97	34.64	Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX...	[more]
Q9M9E2	1.5e-94	34.62	Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop...	[more]
Q9LW63	3.3e-94	33.71	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
P0C899	3.7e-93	34.43	Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th...	[more]

BLAST of CcUC10G205020.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DYI5	0.0e+00	83.36	pentatricopeptide repeat-containing protein At3g12770-like OS=Cucumis melo OX=36...	[more]
A0A5A7UUQ3	0.0e+00	83.36	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1KRX1	5.2e-308	82.28	pentatricopeptide repeat-containing protein At3g12770-like isoform X1 OS=Cucurbi...	[more]
A0A6J1CPK8	8.3e-298	82.80	pentatricopeptide repeat-containing protein At3g12770-like OS=Momordica charanti...	[more]
A0A0A0K740	7.8e-280	82.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375810 PE=4 SV=1	[more]

BLAST of CcUC10G205020.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12770.1	2.2e-101	34.78	mitochondrial editing factor 22	[more]
AT5G16860.1	1.3e-98	34.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G15510.1	1.1e-95	34.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G23330.1	2.4e-95	33.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49142.1	2.6e-94	34.43	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 18..151 e-value: 4.4E-15 score: 57.9 coord: 466..605 e-value: 5.1E-6 score: 28.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 152..252 e-value: 2.5E-17 score: 64.8 coord: 363..459 e-value: 8.4E-21 score: 76.1 coord: 273..362 e-value: 3.3E-15 score: 57.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 291..562
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 408..441 e-value: 1.3E-7 score: 29.3 coord: 305..339 e-value: 5.2E-6 score: 24.3 coord: 96..129 e-value: 1.4E-5 score: 22.9 coord: 168..194 e-value: 7.2E-4 score: 17.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 94..139 e-value: 2.8E-11 score: 43.4 coord: 405..452 e-value: 5.8E-10 score: 39.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 378..399 e-value: 0.0074 score: 16.5 coord: 306..331 e-value: 1.2E-5 score: 25.2 coord: 168..194 e-value: 2.8E-5 score: 24.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 406..440 score: 11.893068
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..338 score: 9.854266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 163..197 score: 9.361008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 94..128 score: 9.558311
None	No IPR available	PANTHER	PTHR24015:SF898	OS07G0436600 PROTEIN	coord: 27..618
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 27..618

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G205020	CcUC10G205020	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G205020.1-exon	CcUC10G205020.1-exon-CicolChr10:32308501..32310393	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G205020.1-cds	CcUC10G205020.1-cds-CicolChr10:32308501..32310393	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G205020.1	CcUC10G205020.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008239	dipeptidyl-peptidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding