CcUC10G202220.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G202220.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pleiotropic drug resistance protein
Location	CicolChr10: 29368360 .. 29368734 (-)
Sequence length	375
RNA-Seq Expression	CcUC10G202220.1
Synteny	CcUC10G202220.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCAACAATAGGGGAGAGTGAGCCAGTAAGAATGATTGAGGTGGGAGAGATAGGAAGAAGAAGCTTTAGTTCATCATTATGCCAACAAACTTCAAGTTTCAAAAATGGCTCGACTGCGGCAGTGGCAAAAGATGACAATGTTGAAGATATTACTTCACTTTGGGAGTTAGTTGAGCGACTGCCGATGTTTGAACGATTGAGATCGTCATTGTTTGACGACAGTCTCAATGGAAAAGTTGAGAAAAGAGTTGTTGATGTCACTAAGCTTGGAGATTTGGAGCGCCATCTCTTTATTAAAAAACTCATCAACAACATTGAAAATGATAATCTAAAGCTTTTGAAAAAAATCAAGGAGAGAATCCACAAGTAA

mRNA sequence

ATGGCCCCAACAATAGGGGAGAGTGAGCCAGTAAGAATGATTGAGGTGGGAGAGATAGGAAGAAGAAGCTTTAGTTCATCATTATGCCAACAAACTTCAAGTTTCAAAAATGGCTCGACTGCGGCAGTGGCAAAAGATGACAATGTTGAAGATATTACTTCACTTTGGGAGTTAGTTGAGCGACTGCCGATGTTTGAACGATTGAGATCGTCATTGTTTGACGACAGTCTCAATGGAAAAGTTGAGAAAAGAGTTGTTGATGTCACTAAGCTTGGAGATTTGGAGCGCCATCTCTTTATTAAAAAACTCATCAACAACATTGAAAATGATAATCTAAAGCTTTTGAAAAAAATCAAGGAGAGAATCCACAAGTAA

Coding sequence (CDS)

ATGGCCCCAACAATAGGGGAGAGTGAGCCAGTAAGAATGATTGAGGTGGGAGAGATAGGAAGAAGAAGCTTTAGTTCATCATTATGCCAACAAACTTCAAGTTTCAAAAATGGCTCGACTGCGGCAGTGGCAAAAGATGACAATGTTGAAGATATTACTTCACTTTGGGAGTTAGTTGAGCGACTGCCGATGTTTGAACGATTGAGATCGTCATTGTTTGACGACAGTCTCAATGGAAAAGTTGAGAAAAGAGTTGTTGATGTCACTAAGCTTGGAGATTTGGAGCGCCATCTCTTTATTAAAAAACTCATCAACAACATTGAAAATGATAATCTAAAGCTTTTGAAAAAAATCAAGGAGAGAATCCACAAGTAA

Protein sequence

MAPTIGESEPVRMIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDITSLWELVERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIKERIHK

Homology

[Close]

BLAST of CcUC10G202220.1 vs. NCBI nr
Match: XP_038903615.1 (pleiotropic drug resistance protein 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 86/118 (72.88%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 13  MIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDITSLWELVERLPMFERLRSSL 72
           MIEVGEIGRRSFSSSLCQQTSSF++GST A   DD   D+ SLWE +ERLP FERLRSSL
Sbjct: 1   MIEVGEIGRRSFSSSLCQQTSSFRSGSTTAEEDDD--VDVASLWESIERLPTFERLRSSL 60

Query: 73  F-DDSLNGKVE-----KRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIKERIHK 125
           F      G+VE     +RVVDVTKLGD ERHLFI+KLINNIENDNLKLL+K++ERIHK
Sbjct: 61  FVGGGGGGEVEEKLGGRRVVDVTKLGDEERHLFIQKLINNIENDNLKLLRKVRERIHK 116

[Close]

BLAST of CcUC10G202220.1 vs. NCBI nr
Match: XP_038903616.1 (pleiotropic drug resistance protein 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 86/118 (72.88%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 13  MIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDITSLWELVERLPMFERLRSSL 72
           MIEVGEIGRRSFSSSLCQQTSSF++GST A   DD   D+ SLWE +ERLP FERLRSSL
Sbjct: 1   MIEVGEIGRRSFSSSLCQQTSSFRSGSTTAEEDDD--VDVASLWESIERLPTFERLRSSL 60

Query: 73  F-DDSLNGKVE-----KRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIKERIHK 125
           F      G+VE     +RVVDVTKLGD ERHLFI+KLINNIENDNLKLL+K++ERIHK
Sbjct: 61  FVGGGGGGEVEEKLGGRRVVDVTKLGDEERHLFIQKLINNIENDNLKLLRKVRERIHK 116

[Close]

BLAST of CcUC10G202220.1 vs. NCBI nr
Match: XP_011652141.2 (pleiotropic drug resistance protein 3 [Cucumis sativus] >KGN59512.2 hypothetical protein Csa_002232 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-30
Identity = 79/126 (62.70%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 1   MAPTIGESEPVRMIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI--TSLWEL 60
           MAPT  ESEPVRMIEVGEIGRR         TSSF+NGS      DD+  D+   SLW+L
Sbjct: 1   MAPTTEESEPVRMIEVGEIGRR---------TSSFRNGSMTTTEDDDHDGDVGDASLWKL 60

Query: 61  VERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKI 120
           ++RLP FERLR SL  D  N +  ++VVDVTKLGD ERHLFI+KLINN+ENDNLKLL+K+
Sbjct: 61  IDRLPTFERLRWSLLLDDDNSR--RKVVDVTKLGDEERHLFIQKLINNVENDNLKLLRKV 115

Query: 121 KERIHK 125
            ER+HK
Sbjct: 121 NERLHK 115

[Close]

BLAST of CcUC10G202220.1 vs. NCBI nr
Match: XP_008443150.1 (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-30
Identity = 80/126 (63.49%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MAPTIGESEPVRMIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI--TSLWEL 60
           MAPT  ESEPVRMIEVGEIGRR+         SSF+NGST A  ++D+   +   SLW+L
Sbjct: 1   MAPTTEESEPVRMIEVGEIGRRA---------SSFRNGSTTAEDQEDDDGHVGDASLWKL 60

Query: 61  VERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKI 120
           ++RLP FERLR SLF+D  NG+  ++VVDVTKLGD+ERH FI+KLI NIENDNLKLL+K+
Sbjct: 61  IDRLPTFERLRLSLFEDD-NGR--RKVVDVTKLGDVERHRFIQKLIKNIENDNLKLLRKV 114

Query: 121 KERIHK 125
            ERIHK
Sbjct: 121 NERIHK 114

[Close]

BLAST of CcUC10G202220.1 vs. NCBI nr
Match: XP_038892176.1 (pleiotropic drug resistance protein 3-like [Benincasa hispida])

HSP 1 Score: 141.4 bits (355), Expect = 5.4e-30
Identity = 86/131 (65.65%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 1   MAPTIGESEPVRMIEVGEIGR-RSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI--TSLWE 60
           MAPT  E EPVR IEV EIGR R  SSSL QQTSSF++ S A+  ++D+  D    SLW 
Sbjct: 1   MAPTTEEIEPVR-IEVAEIGRIRRSSSSLRQQTSSFRSSSGASAEEEDDERDTLDASLWA 60

Query: 61  LVERLPMFERLRSSLFDDSLNGKVE----KRVVDVTKLGDLERHLFIKKLINNIENDNLK 120
            VERLP FERLRSSLFD+    KVE    +RVVDVTKLGD+ERHLFI+KLI +I+NDNLK
Sbjct: 61  TVERLPTFERLRSSLFDNVKGVKVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIQNDNLK 120

Query: 121 LLKKIKERIHK 125
           LL KI+ERIHK
Sbjct: 121 LLTKIRERIHK 130

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy Swiss-Prot
Match: Q5W274 (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-21
Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 1   MAPTIG--ESEPVRMIEVGEIGRRSFSSSLCQQTSSFK-NGSTAAVAKDDNVEDITSL-W 60
           MA  +G  E E  RM ++ EIG RS  SS   Q+SSF+ N + +A  KDD V++   L W
Sbjct: 1   MAQLVGSDEIESFRM-DLAEIG-RSLRSSFRGQSSSFRSNSALSASQKDDAVDEENMLAW 60

Query: 61  ELVERLPMFERLRSSLFDDSLNGK----VEKRVVDVTKLGDLERHLFIKKLINNIENDNL 120
             +ERLP F+RLRSSLF++ +NG       KRV DVTKLG LERH+FI+K+I +IE+DNL
Sbjct: 61  AAIERLPTFDRLRSSLFEE-INGNDANVKRKRVTDVTKLGALERHVFIEKMIKHIEHDNL 120

Query: 121 KLLKKIKERIHK 125
           +LL KI++RI K
Sbjct: 121 QLLHKIRKRIDK 129

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy Swiss-Prot
Match: Q9LFH0 (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-19
Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 14  IEVGEIGRRSFSSSLCQQTSSFKNGSTA-AVAKDDNVED----ITSLWELVERLPMFERL 73
           +E+ EIG RS  SS  + TSSF++ S+   V  D +V D        W  +ERLP  +R+
Sbjct: 15  VELAEIG-RSIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIERLPTVKRM 74

Query: 74  RSSLFDDSLNGKVEK--RVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIKERIHK 125
           RS+L DD      EK  RVVDVTKLG +ERHL I+KLI +IENDNLKLLKKI+ RI +
Sbjct: 75  RSTLLDDGDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKKIRRRIDR 131

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 33  SSFKNGSTAAVAKDDNVEDITSL-WELVERLPMFERLRSSLFDDSLNGKVE-KRVVDVTK 92
           SSF++ S+    +D   E   +L W  ++RLP F+RLRSSL D    G  + K+VVDVTK
Sbjct: 3   SSFRSSSSRNEHEDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYGEGTEKGKKVVDVTK 62

Query: 93  LGDLERHLFIKKLINNIENDNLKLLKKIKERIHK 125
           LG +ERHL I+KLI +IENDNLKLLKKI+ R+ +
Sbjct: 63  LGAMERHLMIEKLIKHIENDNLKLLKKIRRRMER 96

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy Swiss-Prot
Match: Q7PC82 (ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-11
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 47  DNVEDITSLWELVERLPMFERLRSSLF--DDSLNGKVEKRVVDVTKLGDLERHLFIKKLI 106
           D+ + + S W  +ER P FER+ ++LF   D    K ++RV+DV+KL DL+R LFI  LI
Sbjct: 22  DDDDQLRSQWVAIERSPTFERITTALFCKRDEKGKKSQRRVMDVSKLDDLDRRLFIDDLI 81

Query: 107 NNIENDNLKLLKKIKERI 123
            ++ENDN  LL+KI++RI
Sbjct: 82  RHVENDNHVLLQKIRKRI 99

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy Swiss-Prot
Match: Q7PC83 (ABC transporter G family member 41 OS=Arabidopsis thaliana OX=3702 GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 47  DNVEDITSLWELVERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINN 106
           D+ E + S W  VERLP F+R+ ++L      G     ++DVTKL D ER L I+KL+  
Sbjct: 25  DDEEKLRSQWATVERLPTFKRVTTALLH---TGDDSSDIIDVTKLEDAERRLLIEKLVKQ 84

Query: 107 IENDNLKLLKKIKERI 123
           IE DNL+LL+KI++RI
Sbjct: 85  IEADNLRLLRKIRKRI 97

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy TrEMBL
Match: A0A0A0LBH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814320 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.6e-30
Identity = 79/126 (62.70%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 1   MAPTIGESEPVRMIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI--TSLWEL 60
           MAPT  ESEPVRMIEVGEIGRR         TSSF+NGS      DD+  D+   SLW+L
Sbjct: 1   MAPTTEESEPVRMIEVGEIGRR---------TSSFRNGSMTTTEDDDHDGDVGDASLWKL 60

Query: 61  VERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKI 120
           ++RLP FERLR SL  D  N +  ++VVDVTKLGD ERHLFI+KLINN+ENDNLKLL+K+
Sbjct: 61  IDRLPTFERLRWSLLLDDDNSR--RKVVDVTKLGDEERHLFIQKLINNVENDNLKLLRKV 115

Query: 121 KERIHK 125
            ER+HK
Sbjct: 121 NERLHK 115

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy TrEMBL
Match: A0A1S3B6X0 (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.6e-30
Identity = 80/126 (63.49%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MAPTIGESEPVRMIEVGEIGRRSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI--TSLWEL 60
           MAPT  ESEPVRMIEVGEIGRR+         SSF+NGST A  ++D+   +   SLW+L
Sbjct: 1   MAPTTEESEPVRMIEVGEIGRRA---------SSFRNGSTTAEDQEDDDGHVGDASLWKL 60

Query: 61  VERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKI 120
           ++RLP FERLR SLF+D  NG+  ++VVDVTKLGD+ERH FI+KLI NIENDNLKLL+K+
Sbjct: 61  IDRLPTFERLRLSLFEDD-NGR--RKVVDVTKLGDVERHRFIQKLIKNIENDNLKLLRKV 114

Query: 121 KERIHK 125
            ERIHK
Sbjct: 121 NERIHK 114

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy TrEMBL
Match: A0A6J1DJT5 (pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC111021552 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MAPTIGESEPVRMIEVGEIG-RRSFSSSLCQQTS-SFKNGSTAAVAKDDNVEDITSLWEL 60
           MAPT  E EP R IEV E+G RRSFSSS  QQTS SF++ S+ A  +D + E+  S+W  
Sbjct: 6   MAPTTEEREPARTIEVVEMGRRRSFSSSFRQQTSLSFRSSSSVAAEEDGDAEE-ASVWAA 65

Query: 61  VERLPMFERLRSSLFDDSLNGKVE-KRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKK 120
           +ERLP FERLRSSLFD  +  K + +RVVDV KL D+ER LFI+KLI +IENDNL+LL K
Sbjct: 66  IERLPTFERLRSSLFDSGVEEKEKGRRVVDVAKLRDVERRLFIQKLIKHIENDNLRLLTK 125

Query: 121 IKERIHK 125
           ++ERIHK
Sbjct: 126 VRERIHK 131

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy TrEMBL
Match: A0A0A0KMI3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.0e-26
Identity = 78/124 (62.90%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 7   ESEPVRMIEVGEIGR-RSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI-TSLWELVERLPM 66
           E EPVR IEV EI R RS SSS  +Q SSF++ STA++ ++   + I  SLW  VERLP 
Sbjct: 3   EREPVR-IEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 62

Query: 67  FERLRSSLFDDSLNGKVE----KRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIKE 125
           FERLRSSLF+D    +V+    +RVVDVTKLGD+ERHLFI++LI +IENDNLKLL KIKE
Sbjct: 63  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 122

[Close]

BLAST of CcUC10G202220.1 vs. ExPASy TrEMBL
Match: A0A5D3CR38 (Pleiotropic drug resistance protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00570 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25
Identity = 77/125 (61.60%), Postives = 93/125 (74.40%), Query Frame = 0


Query: 7   ESEPVRMIEVGEIGR-RSFSSSLCQQTSSFKNGSTAAVAKDDNVEDI-TSLWELVERLPM 66
           E EPVR IEV EI R RS SSS  +QT SF++ S A+V ++   + I  SLW  VERLP 
Sbjct: 3   EREPVR-IEVSEIRRIRSLSSSFRRQTLSFRSSSAASVEEEHERDTIDPSLWATVERLPT 62

Query: 67  FERLRSSLFDDSLNGKVE-----KRVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIK 125
           FERLRSSLF+D    +V+     +RVVDVTKLGD+ERHLFI++LI +IENDNLKLL KI+
Sbjct: 63  FERLRSSLFEDVRGVEVDQENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIR 122

[Close]

BLAST of CcUC10G202220.1 vs. TAIR 10
Match: AT3G53480.1 (pleiotropic drug resistance 9 )

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-20
Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 14  IEVGEIGRRSFSSSLCQQTSSFKNGSTA-AVAKDDNVED----ITSLWELVERLPMFERL 73
           +E+ EIG RS  SS  + TSSF++ S+   V  D +V D        W  +ERLP  +R+
Sbjct: 15  VELAEIG-RSIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIERLPTVKRM 74

Query: 74  RSSLFDDSLNGKVEK--RVVDVTKLGDLERHLFIKKLINNIENDNLKLLKKIKERIHK 125
           RS+L DD      EK  RVVDVTKLG +ERHL I+KLI +IENDNLKLLKKI+ RI +
Sbjct: 75  RSTLLDDGDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLKKIRRRIDR 131

[Close]

BLAST of CcUC10G202220.1 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 )

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 33  SSFKNGSTAAVAKDDNVEDITSL-WELVERLPMFERLRSSLFDDSLNGKVE-KRVVDVTK 92
           SSF++ S+    +D   E   +L W  ++RLP F+RLRSSL D    G  + K+VVDVTK
Sbjct: 3   SSFRSSSSRNEHEDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYGEGTEKGKKVVDVTK 62

Query: 93  LGDLERHLFIKKLINNIENDNLKLLKKIKERIHK 125
           LG +ERHL I+KLI +IENDNLKLLKKI+ R+ +
Sbjct: 63  LGAMERHLMIEKLIKHIENDNLKLLKKIRRRMER 96

[Close]

BLAST of CcUC10G202220.1 vs. TAIR 10
Match: AT4G15233.1 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 47  DNVEDITSLWELVERLPMFERLRSSLF--DDSLNGKVEKRVVDVTKLGDLERHLFIKKLI 106
           D+ + + S W  +ER P FER+ ++LF   D    K ++RV+DV+KL DL+R LFI  LI
Sbjct: 22  DDDDQLRSQWVAIERSPTFERITTALFCKRDEKGKKSQRRVMDVSKLDDLDRRLFIDDLI 81

Query: 107 NNIENDNLKLLKKIKERI 123
            ++ENDN  LL+KI++RI
Sbjct: 82  RHVENDNHVLLQKIRKRI 99

[Close]

BLAST of CcUC10G202220.1 vs. TAIR 10
Match: AT4G15233.2 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 47  DNVEDITSLWELVERLPMFERLRSSLF--DDSLNGKVEKRVVDVTKLGDLERHLFIKKLI 106
           D+ + + S W  +ER P FER+ ++LF   D    K ++RV+DV+KL DL+R LFI  LI
Sbjct: 22  DDDDQLRSQWVAIERSPTFERITTALFCKRDEKGKKSQRRVMDVSKLDDLDRRLFIDDLI 81

Query: 107 NNIENDNLKLLKKIKERI 123
            ++ENDN  LL+KI++RI
Sbjct: 82  RHVENDNHVLLQKIRKRI 99

[Close]

BLAST of CcUC10G202220.1 vs. TAIR 10
Match: AT4G15215.1 (pleiotropic drug resistance 13 )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 47  DNVEDITSLWELVERLPMFERLRSSLFDDSLNGKVEKRVVDVTKLGDLERHLFIKKLINN 106
           D+ E + S W  VERLP F+R+ ++L      G     ++DVTKL D ER L I+KL+  
Sbjct: 25  DDEEKLRSQWATVERLPTFKRVTTALLH---TGDDSSDIIDVTKLEDAERRLLIEKLVKQ 84

Query: 107 IENDNLKLLKKIKERI 123
           IE DNL+LL+KI++RI
Sbjct: 85  IEADNLRLLRKIRKRI 97

The following BLAST results are available for this feature:

BLAST of CcUC10G202220.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903615.1	1.4e-33	72.88	pleiotropic drug resistance protein 3-like isoform X1 [Benincasa hispida]	[more]
XP_038903616.1	1.4e-33	72.88	pleiotropic drug resistance protein 3-like isoform X2 [Benincasa hispida]	[more]
XP_011652141.2	5.4e-30	62.70	pleiotropic drug resistance protein 3 [Cucumis sativus] >KGN59512.2 hypothetical...	[more]
XP_008443150.1	5.4e-30	63.49	PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo]	[more]
XP_038892176.1	5.4e-30	65.65	pleiotropic drug resistance protein 3-like [Benincasa hispida]	[more]

BLAST of CcUC10G202220.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5W274	8.1e-21	52.27	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 ...	[more]
Q9LFH0	4.5e-19	51.69	ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=...	[more]
Q9ZUT8	2.3e-15	53.19	ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=...	[more]
Q7PC82	2.6e-11	47.44	ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=...	[more]
Q7PC83	1.7e-10	47.37	ABC transporter G family member 41 OS=Arabidopsis thaliana OX=3702 GN=ABCG41 PE=...	[more]

BLAST of CcUC10G202220.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBH1	2.6e-30	62.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814320 PE=3 SV=1	[more]
A0A1S3B6X0	2.6e-30	63.49	pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DJT5	2.1e-27	60.63	pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0KMI3	3.0e-26	62.90	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G29...	[more]
A0A5D3CR38	2.5e-25	61.60	Pleiotropic drug resistance protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CcUC10G202220.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53480.1	3.2e-20	51.69	pleiotropic drug resistance 9	[more]
AT2G37280.1	1.6e-16	53.19	pleiotropic drug resistance 5	[more]
AT4G15233.1	1.9e-12	47.44	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15233.2	1.9e-12	47.44	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15215.1	1.2e-11	47.37	pleiotropic drug resistance 13	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 25..123
None	No IPR available	PANTHER	PTHR19241:SF628	ABC TRANSPORTER G FAMILY MEMBER 33	coord: 25..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G202220	CcUC10G202220	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G202220.1-exon	CcUC10G202220.1-exon-CicolChr10:29368360..29368734	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G202220.1-cds	CcUC10G202220.1-cds-CicolChr10:29368360..29368734	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G202220.1	CcUC10G202220.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0000166	nucleotide binding