CcUC10G202090.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G202090.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 29244053 .. 29244630 (-)
Sequence length	228
RNA-Seq Expression	CcUC10G202090.1
Synteny	CcUC10G202090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATATCATAAGGGATGACTCTTTGAATTCTTTTTCTACAAAGTCTATGATATCTATTTTATTACAGGGTAATTAGATGATTAGTATATGGTAATATCATAAGGGTTGGGGTTGGGTTTGATAAATCTTAGGTTAATTTGGGTTGTGGTCTTGAAGAACTAGTCAGTTCAGTTTGGTTCTCGGATTTGGTTCAACCCAAATCGAACCTAAAAGCATTTGATTCTCTCGTTCTTCTTTGCATTTTATCTTTGCCTAGGGCAGATTCGTGATGCAAGGATAAAAGTTTTTTCAAGCCTAAAATCAGAAAGCAGTGGAGATTTTTTAGAATCGAAGAAGTTGTGTTCATCCCTTAAGGTTCAAGCATGTTTTTTCAGTGTTATTGAAATAATACTTTCAAAATAGAAGTTTTTGAACTGTTCACTATGTGGTTGGTCTGTATTTCTTGCTATGTTGATTTTTCAGGTTCTACCTGATGGAGGAACCATTAAATCATAATCCTATAAATTTAAGGATTGTGATTACAACCTCTTCAACTTTTGTCAAAGGCATCTCTCTTCAAATTGGTCAAACCTAA

mRNA sequence

ATGGTTAATTTGGGTTGTGGTCTTGAAGAACTAGTCAGGCAGATTCGTGATGCAAGGATAAAAGTTTTTTCAAGCCTAAAATCAGAAAGCAGTGGAGATTTTTTAGAATCGAAGAAGTTCTACCTGATGGAGGAACCATTAAATCATAATCCTATAAATTTAAGGATTGTGATTACAACCTCTTCAACTTTTGTCAAAGGCATCTCTCTTCAAATTGGTCAAACCTAA

Coding sequence (CDS)

ATGGTTAATTTGGGTTGTGGTCTTGAAGAACTAGTCAGGCAGATTCGTGATGCAAGGATAAAAGTTTTTTCAAGCCTAAAATCAGAAAGCAGTGGAGATTTTTTAGAATCGAAGAAGTTCTACCTGATGGAGGAACCATTAAATCATAATCCTATAAATTTAAGGATTGTGATTACAACCTCTTCAACTTTTGTCAAAGGCATCTCTCTTCAAATTGGTCAAACCTAA

Protein sequence

MVNLGCGLEELVRQIRDARIKVFSSLKSESSGDFLESKKFYLMEEPLNHNPINLRIVITTSSTFVKGISLQIGQT

Homology

The following BLAST results are available for this feature:

BLAST of CcUC10G202090.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G202090.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G202090.1 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G202090.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G202090	CcUC10G202090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G202090.1-exon	CcUC10G202090.1-exon-CicolChr10:29244053..29244164	exon
CcUC10G202090.1-exon	CcUC10G202090.1-exon-CicolChr10:29244292..29244370	exon
CcUC10G202090.1-exon	CcUC10G202090.1-exon-CicolChr10:29244462..29244495	exon
CcUC10G202090.1-exon	CcUC10G202090.1-exon-CicolChr10:29244628..29244630	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G202090.1-cds	CcUC10G202090.1-cds-CicolChr10:29244053..29244164	CDS
CcUC10G202090.1-cds	CcUC10G202090.1-cds-CicolChr10:29244292..29244370	CDS
CcUC10G202090.1-cds	CcUC10G202090.1-cds-CicolChr10:29244462..29244495	CDS
CcUC10G202090.1-cds	CcUC10G202090.1-cds-CicolChr10:29244628..29244630	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G202090.1	CcUC10G202090.1-protein	polypeptide