Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTAATAATCAAATCACAAAAATTTATAATGTGATGTCATAAATCGGATAAATTTACCCAGTTTTCTCCAAGAAGAGGCTCGTCTCCGCCAAAATCCGCCATTCTTGAAGGTTCTGCCTGTGCGAATTATCGAGAAGGTCGTGGAAGTTGGCAGAGAGCTGAGTTTTTAATCTCGCGTCTTCGTGAGCCGGCTCACTTCTAATCTTCCATGGCTCTCAACCCTAATCTATTTCCAAATGGGATGCCCGTTCCCTTCACCAACGAGCTCTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGATTGATAAGATCCCCGGGTCAGTTGTTTCTCTTTTTCTAAATTTTTCCTGGTTTAATTAGTTTTCCGATTTGCAAATTTGAGTTGATTTTAGGCGTGGAGACGTTCTGATTGACCTTAATCGTGGGAACGTCTTTTATAACTTTATTTAGTTTATACTGTGTTCGATGGGGTTTGAGATGTGATTGATTATCGAAGGTAGCATAATGTCTACGCGAGGAGGAACCGTCGAATTTAGGAACTTGTTTTCAATGTTAGAGATTGTTTAGAGTCACTTTTTGTATGGTTAGTTTTTGCTTGGCTCATTGTCTTTTTGATTGCTATGGGCTGAGTAGCATGAACAACTTTTAATTTATTATGATCCCAAATGATGGATTCAATAAGTTCTTGTGAATAACCACATCCACCGGGTAGAAACATTAACCTTAAGCCCATACAAGATGAGCACCAAGGAGGCCCAGATAATGAAGAACCTTAACCAAGACTATGACTAAATTACCTGGGGTGCATCTGCCCATAAGAAATCATGAAATCCCCCATTAATAGTAATCAAACTCTGCCCAAAGTTTCCTCCCTTAATATGAGTTAGTACTACCAATTTGAGCAGCATGGTAGAAAGAAATTCTTATGGCTTGCTCTCAATCTAATCTTTTTCTGTTTCTTTGGGGAGAAAGAAATTGGCTCATTTTTGGGGACGCTTCCTATTCCTTTGATTATTTTATGGATTTGCTCCTTTTTCATGCTTTGTATTGGTGTAAATGTAAACACTCTTTTACTGATTATAACCTATCTTCTTTAGCTTCGCCTAATCACCATTAGGCATTTGGGGTTATTACCCTTTTATTTCACTCATCAATTCATGTGTTTCTCTTCTTGAAATATATGATATATACTCATACACATCTGTTTGTGATCTGGTCCAAAAGGGATTCTGCAGGTTTTGCCTGTTTTTATTTATTATTATTTTTTTAATGTGCATTTTAGAACTGTAAGGGTTTTATGTTGCTCCTTTTTCATATGTAGTTTTTCCTTCGGAACAGTTTTTGGTCTCTTATACCAAAAAAAGAAGAAAACAAAATGGAAGATATAATATCCGATTCTGACATATTTTACTAGTAATAAATGCCTCCTTTGTATTAATTTGGGATGAACTAGGTTGTAAATGGCACGGATGGTGCATGAGCGTAATGGATTTTACCTCTTTCTTTCAGGGCTAATAGTGATCGTGTGAAAGCAAAAGGGACTATTTACTTGTCAAATGTGCGCATGGTCTTTGTCTCAAATAAACCAGATCCGAACTTTACTGCATTCGACATGCCTTTGGTATGGGCTTTCAGTCTTTATGTTCACTTGCCTTCGTGATGCTTTTTGTTCTTTTAACTATCTTTGGAGACATACTTGTGGATCATTTTCTTGCATAAACACAAGGATTTTTTTGAATTCCTAGGAAGATGTATTAAGCATACTTGCTGTTCTGAATTAGTTAACGGACATTCTTTTTGGTTGCGAATTTATCTTCAAAACATTTAACCGTACGCCCTGACGTGATGTAATTTTTTATTAGTTTTATTTATTTGTTTTATTGGGCAACTGCTTCATATTTAGTCTAATAAAAGCAATCTTGTTTCCAGAAGAACTATTTAAGTTTCTTTCAATACTGCATTGTTTTCTCCCTCAAGTTCTCACGTTTTCGATTTCTTTTTACATTTTGCCAAACCATAGACCTCTTTAAAGATAACTTCATTTACTTATTACAAATTTACAATTGATCTTGCCCCTTCCCCTTAGCTGAATTGGTTTCTTTTTGAATTCATTGCATCCATTGTATTCTTAGAAACCAAATTAAGACTTCTGACCCTTCGTCTTAGTGACTATCCCTGTACGTCCTTTTCCCTTGATAGCCAAATCATCCACAATGTTCAGTGTTCATGGATAATCCCATCCTACTTGCATCATGTGAATATGGATTGTCATGGATTTCCAACGCTGGTAAACATCCTAAACTCTTTCAGCAATTACCTTGGATGTGATTCACTACAATTTGCACTACGAATATTCCTCCATTGGGTCCTTGCTCCTGAGCATTCATACACAATAATGGTCTTTGAATAACACTGAATGAAACCCCTCACATTCTCTCCAATTGCTTCAATTATTCCCTCTTTTCACATCGTCAAAGCGAGACCTCTCTGAATCCACCCCATAATATGCAATTACCTCAGGCTTACCATGCTTTTGATCACACACACACCACCTTCCAACCTTGAAGGAAAGACGGCCCACGTTTAACCACCTAATATTCCTGCATTAATCTTCTACCTCTTGAGTCTTATAAGATAGAGCTTTGTTAACGTGAAAATGATTGGTCTTACTATCTTCACTATTGCATTTATTAGAGCACCCTAGAACTAGTATTGATTTGTTAGGATCCTGAATATAAGAAACACTGAACATAAGAAACACTAAGATAGAATTATTTTGCAATATCATAGAGATTAAGTAACATTAGCCTTTTGATAGGGCTATATCTCTCCTACAGTCCACCCACTATGGAGACACATCAAAATATGAGCTTTCCTCCACAAATCCTAGCTCCTTATATTTATAACCGAGCCACCTCTATCTATCTATCATTGTACACTTACTAATATCTAACTAATATTTCCAATATGTCCCCTGATAGTACTCTACAGCCTTCATGGAAAGGCACCCCTCTTAAAACATAATGATCTGTTTGAGTCCTCCGACCTCACCATGAAGCAACTGATGAATAATCCTATTATTGGCCTCTTATCATTATTTGTCCATAATCATCATTATACCCTTAATAATATCTCACTTATATCCCCATTATATTCCCTAATAGCACTCCCACACAATCTTCATGGAAAGGGAGCCGTGTTAAAACACAATGATGTGTTTGAGTCCTCATGACCTCACTTGATGAATAATCCTATTATTGAATCCTCACAACCTTACCTGGAAGCAACATATCCCCTTTTGGATTGGATTATTCTATTTGACATTTTGTTTCTTTCCTATCTAATATTTTGCTTGTTGATTTTGCAGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTGGAACCTGTAAGCAAGCCAACTATTACATCACATCTTGTTTAGTATGTCCGAGTCCTACTTTAGCAGCCTAGTTAATACTAATAGCTTATTACAGGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCGTTTAAGATTTTGTTCAAGGAAGGGGGATGTGGTACTTTTGTGCCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCCCGAGTGGATCCATTGCAGGCAGCGCAAACTCCTGTCGACGAAATGATGAGACATGCGTAAGTAATGTTGATTCTCGTTGAATTGTCTCATGGTCAAGTTGGAATTCGTCATTTGATTATGCTCTTGCTGTTCAACTTGCAGATATGTTGATCCAAATGATCCGACCAAAATCTTCTTACAGCAGCCAACAACGGAGTCCCAGTTAAGGAGGCGAACATACCAATCCCAACCAGCTGAAAATGCAATGTGAAAGTTGAAAAACTATCTCATACTATAGATTTGTTCGTTGGTTGTTACTTTGTATTGTCTACAAGGAGCCAGGGACTTGATGATGGAACGAATGAACACTTGTACAGTTGAAAAATGTGTTGTTGAATTTATAGTTATGAGCGGTCAATTGTCATTTACTGAAGTTTCAACTTAACTCTTTCGATCTGTTATTTTGCATGTTGATGCATGATAGCATTGGCATAAAGTAGTATTTATTTTAATTAATGTATTCTATGTGTATTCAACTAAAATAAAATAATAGAATTTTATTATGGTCTTGCGATTGTATGGCTTGTAACTGCTATTTGTTTTTTAGCTTCTGAAGTTT
mRNA sequence
GACTAATAATCAAATCACAAAAATTTATAATGTGATGTCATAAATCGGATAAATTTACCCAGTTTTCTCCAAGAAGAGGCTCGTCTCCGCCAAAATCCGCCATTCTTGAAGGTTCTGCCTGTGCGAATTATCGAGAAGGTCGTGGAAGTTGGCAGAGAGCTGAGTTTTTAATCTCGCGTCTTCGTGAGCCGGCTCACTTCTAATCTTCCATGGCTCTCAACCCTAATCTATTTCCAAATGGGATGCCCGTTCCCTTCACCAACGAGCTCTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGATTGATAAGATCCCCGGGGCTAATAGTGATCGTGTGAAAGCAAAAGGGACTATTTACTTGTCAAATGTGCGCATGGTCTTTGTCTCAAATAAACCAGATCCGAACTTTACTGCATTCGACATGCCTTTGTTTTATTTATTTGTTTTATTGGAAACCAAATTAAGACTTCTGACCCTTCGTCTTAGTGACTATCCCTGTACGTCCTTTTCCCTTGATAGCCAAATCATCCACAATGTTCAGTGTTCATGGATAATCCCATCCTACTTGCATCATGTGAATATGGATTGTCATGGATTTCCAACGCTGGTAAACATCCTAAACTCTTTCAGCAATTACCTTGGATCACTCCCACACAATCTTCATGGAAAGGGAGCCGTGTTAAAACACAATGATCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTGGAACCTGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCGTTTAAGATTTTGTTCAAGGAAGGGGGATGTGGTACTTTTGTGCCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCCCGAGTGGATCCATTGCAGGCAGCGCAAACTCCTGTCGACGAAATGATGAGACATGCATATGTTGATCCAAATGATCCGACCAAAATCTTCTTACAGCAGCCAACAACGGAGTCCCAGTTAAGGAGGCGAACATACCAATCCCAACCAGCTGAAAATGCAATGTGAAAGTTGAAAAACTATCTCATACTATAGATTTGTTCGTTGGTTGTTACTTTGTATTGTCTACAAGGAGCCAGGGACTTGATGATGGAACGAATGAACACTTGTACAGTTGAAAAATGTGTTGTTGAATTTATAGTTATGAGCGGTCAATTGTCATTTACTGAAGTTTCAACTTAACTCTTTCGATCTGTTATTTTGCATGTTGATGCATGATAGCATTGGCATAAAGTAGTATTTATTTTAATTAATGTATTCTATGTGTATTCAACTAAAATAAAATAATAGAATTTTATTATGGTCTTGCGATTGTATGGCTTGTAACTGCTATTTGTTTTTTAGCTTCTGAAGTTT
Coding sequence (CDS)
ATGGCTCTCAACCCTAATCTATTTCCAAATGGGATGCCCGTTCCCTTCACCAACGAGCTCTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGATTGATAAGATCCCCGGGGCTAATAGTGATCGTGTGAAAGCAAAAGGGACTATTTACTTGTCAAATGTGCGCATGGTCTTTGTCTCAAATAAACCAGATCCGAACTTTACTGCATTCGACATGCCTTTGTTTTATTTATTTGTTTTATTGGAAACCAAATTAAGACTTCTGACCCTTCGTCTTAGTGACTATCCCTGTACGTCCTTTTCCCTTGATAGCCAAATCATCCACAATGTTCAGTGTTCATGGATAATCCCATCCTACTTGCATCATGTGAATATGGATTGTCATGGATTTCCAACGCTGGTAAACATCCTAAACTCTTTCAGCAATTACCTTGGATCACTCCCACACAATCTTCATGGAAAGGGAGCCGTGTTAAAACACAATGATCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTGGAACCTGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCGTTTAAGATTTTGTTCAAGGAAGGGGGATGTGGTACTTTTGTGCCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCCCGAGTGGATCCATTGCAGGCAGCGCAAACTCCTGTCGACGAAATGATGAGACATGCATATGTTGATCCAAATGATCCGACCAAAATCTTCTTACAGCAGCCAACAACGGAGTCCCAGTTAAGGAGGCGAACATACCAATCCCAACCAGCTGAAAATGCAATGTGA
Protein sequence
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVSNKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYLHHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM
Homology
BLAST of CcUC10G198340.1 vs. NCBI nr
Match:
XP_038903065.1 (uncharacterized protein LOC120089752 [Benincasa hispida])
HSP 1 Score: 378.3 bits (970), Expect = 6.2e-101
Identity = 199/290 (68.62%), Postives = 200/290 (68.97%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPIFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYVHDEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVHDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPT+IFLQQPTTESQLRRRTYQSQP ENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTTESQLRRRTYQSQPVENAM 202
BLAST of CcUC10G198340.1 vs. NCBI nr
Match:
XP_008465172.1 (PREDICTED: uncharacterized protein LOC103502837 [Cucumis melo] >KAA0037680.1 UPF0664 stress-induced protein C29B12.11c [Cucumis melo var. makuwa])
HSP 1 Score: 377.9 bits (969), Expect = 8.0e-101
Identity = 200/290 (68.97%), Postives = 200/290 (68.97%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPVFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYV DEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVRDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. NCBI nr
Match:
XP_004141150.1 (uncharacterized protein LOC101208147 [Cucumis sativus] >KGN59776.1 hypothetical protein Csa_002671 [Cucumis sativus])
HSP 1 Score: 375.9 bits (964), Expect = 3.1e-100
Identity = 199/290 (68.62%), Postives = 199/290 (68.62%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPVFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYV DEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVRDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPTKIFLQQP TESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPATESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. NCBI nr
Match:
KAG7018140.1 (SPAC29B12.11c [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 372.1 bits (954), Expect = 4.4e-99
Identity = 194/290 (66.90%), Postives = 200/290 (68.97%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGT+YLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
+KPDP FTAFDMPL
Sbjct: 61 SKPDPYFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYVHDEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVHDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPT+IFLQQPT ESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTAESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. NCBI nr
Match:
XP_022983649.1 (uncharacterized protein LOC111482201 [Cucurbita maxima] >XP_023526417.1 uncharacterized protein LOC111789925 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 371.3 bits (952), Expect = 7.5e-99
Identity = 195/290 (67.24%), Postives = 199/290 (68.62%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLF NGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFSNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPYFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYVHDEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVHDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPT+IFLQQPT ESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTAESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. ExPASy TrEMBL
Match:
A0A5A7T2S6 (UPF0664 stress-induced protein C29B12.11c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00010 PE=4 SV=1)
HSP 1 Score: 377.9 bits (969), Expect = 3.9e-101
Identity = 200/290 (68.97%), Postives = 200/290 (68.97%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPVFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYV DEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVRDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. ExPASy TrEMBL
Match:
A0A1S3CPS8 (uncharacterized protein LOC103502837 OS=Cucumis melo OX=3656 GN=LOC103502837 PE=4 SV=1)
HSP 1 Score: 377.9 bits (969), Expect = 3.9e-101
Identity = 200/290 (68.97%), Postives = 200/290 (68.97%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPVFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYV DEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVRDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. ExPASy TrEMBL
Match:
A0A0A0LI97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845430 PE=4 SV=1)
HSP 1 Score: 375.9 bits (964), Expect = 1.5e-100
Identity = 199/290 (68.62%), Postives = 199/290 (68.62%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPVFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYV DEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVRDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPTKIFLQQP TESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPATESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. ExPASy TrEMBL
Match:
A0A6J1J814 (uncharacterized protein LOC111482201 OS=Cucurbita maxima OX=3661 GN=LOC111482201 PE=4 SV=1)
HSP 1 Score: 371.3 bits (952), Expect = 3.6e-99
Identity = 195/290 (67.24%), Postives = 199/290 (68.62%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLF NGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFSNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
NKPDP FTAFDMPL
Sbjct: 61 NKPDPYFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYVHDEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVHDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPT+IFLQQPT ESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTAESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. ExPASy TrEMBL
Match:
A0A6J1F0U4 (uncharacterized protein LOC111441354 OS=Cucurbita moschata OX=3662 GN=LOC111441354 PE=4 SV=1)
HSP 1 Score: 367.5 bits (942), Expect = 5.3e-98
Identity = 193/290 (66.55%), Postives = 199/290 (68.62%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNPNLF NGMPVPFT+ELFVLARDGVEFE+DKIPGA+SDRVKAKGTIYLSNVRMVFVS
Sbjct: 1 MALNPNLFSNGMPVPFTHELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
+KPDP FTAFDMPL
Sbjct: 61 SKPDPYFTAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LYVHDEKFNQPIFFCNNI
Sbjct: 121 ------------------------------------------LYVHDEKFNQPIFFCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDP 240
SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDP
Sbjct: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDP 202
Query: 241 LQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAENAM 291
LQAAQTPVDEMMRHAYVDPNDPT+IFLQQPT ESQLRRRTYQSQPAENAM
Sbjct: 241 LQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTAESQLRRRTYQSQPAENAM 202
BLAST of CcUC10G198340.1 vs. TAIR 10
Match:
AT5G11680.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 297.4 bits (760), Expect = 1.3e-80
Identity = 160/295 (54.24%), Postives = 175/295 (59.32%), Query Frame = 0
Query: 1 MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60
MALNP L PNGMPVPF NE+FVL RDGVEFE+DKIPG + VKAKG IYLSN+RMVFVS
Sbjct: 1 MALNPQLLPNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFVS 60
Query: 61 NKPDPNFTAFDMPLFYLFVLLETKLRLLTLRLSDYPCTSFSLDSQIIHNVQCSWIIPSYL 120
+KP NF AFDMPL
Sbjct: 61 SKPVDNFVAFDMPL---------------------------------------------- 120
Query: 121 HHVNMDCHGFPTLVNILNSFSNYLGSLPHNLHGKGAVLKHNDLYVHDEKFNQPIFFCNNI 180
LY+H EKFNQPIF CNNI
Sbjct: 121 ------------------------------------------LYIHAEKFNQPIFHCNNI 180
Query: 181 SGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMN------- 240
+G VEPVVPE++HRALYSTHSFKILFKEGGCGTFVPLF NL+SSVRQYN+ M
Sbjct: 181 AGQVEPVVPENEHRALYSTHSFKILFKEGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAA 207
Query: 241 AGPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQQPTTESQLRRRTYQSQPAEN 289
A P VDPLQAAQTPVDEMMRHAYVDPNDPT+I+LQQP+ ESQLRRR Y S AE+
Sbjct: 241 AAPHVDPLQAAQTPVDEMMRHAYVDPNDPTRIYLQQPSGESQLRRRAYHSGAAEH 207
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038903065.1 | 6.2e-101 | 68.62 | uncharacterized protein LOC120089752 [Benincasa hispida] | [more] |
| XP_008465172.1 | 8.0e-101 | 68.97 | PREDICTED: uncharacterized protein LOC103502837 [Cucumis melo] >KAA0037680.1 UPF... | [more] |
| XP_004141150.1 | 3.1e-100 | 68.62 | uncharacterized protein LOC101208147 [Cucumis sativus] >KGN59776.1 hypothetical ... | [more] |
| KAG7018140.1 | 4.4e-99 | 66.90 | SPAC29B12.11c [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022983649.1 | 7.5e-99 | 67.24 | uncharacterized protein LOC111482201 [Cucurbita maxima] >XP_023526417.1 uncharac... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T2S6 | 3.9e-101 | 68.97 | UPF0664 stress-induced protein C29B12.11c OS=Cucumis melo var. makuwa OX=1194695... | [more] |
| A0A1S3CPS8 | 3.9e-101 | 68.97 | uncharacterized protein LOC103502837 OS=Cucumis melo OX=3656 GN=LOC103502837 PE=... | [more] |
| A0A0A0LI97 | 1.5e-100 | 68.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845430 PE=4 SV=1 | [more] |
| A0A6J1J814 | 3.6e-99 | 67.24 | uncharacterized protein LOC111482201 OS=Cucurbita maxima OX=3661 GN=LOC111482201... | [more] |
| A0A6J1F0U4 | 5.3e-98 | 66.55 | uncharacterized protein LOC111441354 OS=Cucurbita moschata OX=3662 GN=LOC1114413... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G11680.1 | 1.3e-80 | 54.24 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25110723..25111179 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25111265..25111470 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25111559..25111630 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25111784..25111833 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25112674..25112865 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25113114..25113135 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25113377..25113488 | exon |
| CcUC10G198340.1-exon | CcUC10G198340.1-exon-CicolChr10:25114681..25114999 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G198340.1-three_prime_utr | CcUC10G198340.1-three_prime_utr-CicolChr10:25110723..25111070 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25111071..25111179 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25111265..25111470 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25111559..25111630 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25111784..25111833 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25112674..25112865 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25113114..25113135 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25113377..25113488 | CDS |
| CcUC10G198340.1-cds | CcUC10G198340.1-cds-CicolChr10:25114681..25114790 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G198340.1-five_prime_utr | CcUC10G198340.1-five_prime_utr-CicolChr10:25114791..25114999 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC10G198340.1 | CcUC10G198340.1-protein | polypeptide |
