CcUC10G187590.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC10G187590.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	CicolChr10: 1592196 .. 1592936 (+)
Sequence length	741
RNA-Seq Expression	CcUC10G187590.1
Synteny	CcUC10G187590.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGCATAGAGTACAATGCCTTGCTTTCTTTGCTTTGTTGGGTTTAGGGTTAGCTTCTGCAGCTAGAACCCTTGTTGCCTATGATGGTTATGTCCATGTCCCAGTGTTAGGGCATGTTTCTATTGGATATGGTAGTGGAGAAGGTGGTGGTACTGGATATGGAATTACTGCTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGAGGTGGAGGTGGCTCTACCGACGGAGGTGTTGGATATGGAAGTGGGGGAGGTGAAGGAAGTGGCCTTGGATATGGAGGTGGAAAAGAAGGTGGTTATGGCGGTGGTGGTGGTGGAGGAAGTGGTGGTGGAAGCGGTGGTGGATATGGCCCGGGCGGTGGTTATGGAAGTGGAGGTGGAGGTGGGTCTGGTGGTGGTTATGGTAGTTGGGGATCAGGTAACGGAGGTGGGGGTGGTGGTGGAAATGGAGGCGGTGGCGGTTACGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGGGGTGGAGGACAAGGAGGCGGCTCAGGGAGTGGATCAGGAGGGCGTGGAGGTGGTGGAGGAGGCGGCTCAGGGGGTGGCTATGGTGGAGGGGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGGTGGCTCCGGCGGCGGGTATGGTGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGAGTGGAGAGGGTGGTGGTGGATATGCACCTTGA

mRNA sequence

ATGGAGAAGCATAGAGTACAATGCCTTGCTTTCTTTGCTTTGTTGGGTTTAGGGTTAGCTTCTGCAGCTAGAACCCTTGTTGCCTATGATGGTTATGTCCATGTCCCAGTGTTAGGGCATGTTTCTATTGGATATGGTAGTGGAGAAGGTGGTGGTACTGGATATGGAATTACTGCTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGAGGTGGAGGTGGCTCTACCGACGGAGGTGTTGGATATGGAAGTGGGGGAGGTGAAGGAAGTGGCCTTGGATATGGAGGTGGAAAAGAAGGTGGTTATGGCGGTGGTGGTGGTGGAGGAAGTGGTGGTGGAAGCGGTGGTGGATATGGCCCGGGCGGTGGTTATGGAAGTGGAGGTGGAGGTGGGTCTGGTGGTGGTTATGGTAGTTGGGGATCAGGTAACGGAGGTGGGGGTGGTGGTGGAAATGGAGGCGGTGGCGGTTACGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGGGGTGGAGGACAAGGAGGCGGCTCAGGGAGTGGATCAGGAGGGCGTGGAGGTGGTGGAGGAGGCGGCTCAGGGGGTGGCTATGGTGGAGGGGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGGTGGCTCCGGCGGCGGGTATGGTGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGAGTGGAGAGGGTGGTGGTGGATATGCACCTTGA

Coding sequence (CDS)

ATGGAGAAGCATAGAGTACAATGCCTTGCTTTCTTTGCTTTGTTGGGTTTAGGGTTAGCTTCTGCAGCTAGAACCCTTGTTGCCTATGATGGTTATGTCCATGTCCCAGTGTTAGGGCATGTTTCTATTGGATATGGTAGTGGAGAAGGTGGTGGTACTGGATATGGAATTACTGCTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGAGGTGGAGGTGGCTCTACCGACGGAGGTGTTGGATATGGAAGTGGGGGAGGTGAAGGAAGTGGCCTTGGATATGGAGGTGGAAAAGAAGGTGGTTATGGCGGTGGTGGTGGTGGAGGAAGTGGTGGTGGAAGCGGTGGTGGATATGGCCCGGGCGGTGGTTATGGAAGTGGAGGTGGAGGTGGGTCTGGTGGTGGTTATGGTAGTTGGGGATCAGGTAACGGAGGTGGGGGTGGTGGTGGAAATGGAGGCGGTGGCGGTTACGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGGGGTGGAGGACAAGGAGGCGGCTCAGGGAGTGGATCAGGAGGGCGTGGAGGTGGTGGAGGAGGCGGCTCAGGGGGTGGCTATGGTGGAGGGGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGGTGGCTCCGGCGGCGGGTATGGTGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGAGTGGAGAGGGTGGTGGTGGATATGCACCTTGA

Protein sequence

MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAGYGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGYGGGGGGGSGGGSGGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGGGQGGGSGSGSGGRGGGGGGGSGGGYGGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAGGGSGEGGGGYAP

Homology

[Close]

BLAST of CcUC10G187590.1 vs. NCBI nr
Match: XP_022923391.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata] >XP_022923392.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-39
Identity = 209/269 (77.70%), Postives = 219/269 (81.41%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME H +Q L FFALLG GLASAARTLVAYD  V VPVLG VS+GYG GEGGG+GYG+T G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY--GGGGGGGSGGGS 120
           Y GGGG   GGG GGGGGS  GGVGYG+GGGEGSG GYGGG++ GY  GGGGGGGSGGGS
Sbjct: 61  YAGGGG---GGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGS 120

Query: 121 GGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGGGQG 180
           GGGYGPGGGYGSGGG GSGGGYGS G G GGGGGGG+GGGGGYGAGGANGGGYG GGGQG
Sbjct: 121 GGGYGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQG 180

Query: 181 GGSGSGSGGRGGGGGGGSGGGY-GGGENGGGYGS-----------------GGGGGSGGG 240
           GGSGSG+GG GGGGGGGSGGGY GGG NGGGYGS                 GGGGGSGGG
Sbjct: 181 GGSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGGGGGSGSGAGGHGGGGGGGSGGG 240

Query: 241 YGGGGAQGGGYGAGGGSGEG---GGGYAP 247
           YGGGGAQGGGYGAGGGSG+G   GGGYAP
Sbjct: 241 YGGGGAQGGGYGAGGGSGQGGGHGGGYAP 266

[Close]

BLAST of CcUC10G187590.1 vs. NCBI nr
Match: XP_023007588.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima])

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-38
Identity = 209/275 (76.00%), Postives = 219/275 (79.64%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME H ++ L FFALLG GLASAARTLVAYD  V VPVLG VSIGYG GEGGG+GYG+TAG
Sbjct: 13  MENHAIEYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSIGYGGGEGGGSGYGVTAG 72

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY--GGGGGGGSGGGS 120
           Y GGGGGGR    GGGGGS  GGVGYG+GGGEGSG GYGGG++ GY  GGGGGGGSGGGS
Sbjct: 73  YAGGGGGGR----GGGGGSAYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGS 132

Query: 121 GGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGAN------GGGYG 180
           GGGYGPGGGYGSGGG GSGGGYGS G G GGGGGGG+GGGGGYGAGGAN      GGGYG
Sbjct: 133 GGGYGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYG 192

Query: 181 RGGGQGGGSGSGSGGRGGGGGGGSGGGY-GGGENGGGYGSGG-----------------G 240
            GGGQGG SGSG+GG GGGGGGGSGGGY GGG NGGGYGSGG                 G
Sbjct: 193 SGGGQGGSSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGVG 252

Query: 241 GGSGGGYGGGGAQGGGYGAGGGSGEG---GGGYAP 247
           GGSGGGYGGGGAQGGGYGAGGGSG+G   GGGYAP
Sbjct: 253 GGSGGGYGGGGAQGGGYGAGGGSGQGGGHGGGYAP 283

[Close]

BLAST of CcUC10G187590.1 vs. NCBI nr
Match: XP_038903688.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-38
Identity = 201/249 (80.72%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME HRVQ LAFFA LGLGLASAARTL+AYDG VH PVLGHVSIGYG GEG G GYG+T G
Sbjct: 1   MENHRVQYLAFFAFLGLGLASAARTLIAYDGNVHAPVLGHVSIGYGGGEGAGGGYGVTVG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGYGGGGGGGSGGGSGG 120
           YGGGGGGGR    GGGGGSTDGGVGYGSGGGEGSG GYGGG+E GYG GGGGG GG  GG
Sbjct: 61  YGGGGGGGR----GGGGGSTDGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGG 120

Query: 121 -----GYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGG 180
                GYGPGGGYG+GGG GSGGGYG+ GSG GGGGGGGNGGGGGYGAGGANGGGYG GG
Sbjct: 121 GGVGVGYGPGGGYGNGGGAGSGGGYGNGGSGYGGGGGGGNGGGGGYGAGGANGGGYGSGG 180

Query: 181 GQGGGSGSGSGGRGGGGGGGSGGGY-GGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAG 240
           GQGGGSGSG+GG GGGGGGGSGGGY GGGENGGGYGSGGG G G G G GG +GGG G G
Sbjct: 181 GQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGQGGGSGSGAGG-RGGGGGGG 240

Query: 241 GGSGEGGGG 244
            G G GGGG
Sbjct: 241 SGGGYGGGG 244

[Close]

BLAST of CcUC10G187590.1 vs. NCBI nr
Match: XP_023552301.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.9 bits (416), Expect = 9.1e-37
Identity = 207/269 (76.95%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME H +Q L FFALLG GLASAARTLVAYDG V VPVLG VS+    G GGG+GYG+TAG
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDGNVQVPVLGRVSV----GSGGGSGYGVTAG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY--GGGGGGGSGGGS 120
           Y GGGGGGRGGGGG G     GGVGYG+GGGEGSG GYGGG++ GY  GGGGGGGSGGGS
Sbjct: 61  YAGGGGGGRGGGGGSG----YGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGS 120

Query: 121 GGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGGGQG 180
           GGGYGPGGGYGSGGG GSGGGYGS G G GGGGGGG+GGGGGYGAGGANGGGYG GGGQG
Sbjct: 121 GGGYGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQG 180

Query: 181 GGSGSGSGGRGGGGGGGSGGGY-GGGENGGGYGS-----------------GGGGGSGGG 240
           GGSGSG+GG GGGGGGGSGGGY GGG NGGGYGS                 GGGGGSGGG
Sbjct: 181 GGSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGGGGGSGGG 240

Query: 241 YGGGGAQGGGYGAGGGSGEG---GGGYAP 247
           YGGGGAQGGGYGAGGGSG+G   GGGYAP
Sbjct: 241 YGGGGAQGGGYGAGGGSGQGGGHGGGYAP 261

[Close]

BLAST of CcUC10G187590.1 vs. NCBI nr
Match: XP_011652713.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN55754.1 hypothetical protein Csa_011047 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 4.5e-36
Identity = 207/275 (75.27%), Postives = 216/275 (78.55%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME HRVQ LA FALLGLGLASAARTL+AYDG VH PVLGH S+GYG GEG G+GYG++ G
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY---GGGGGGGSGGG 120
           YGGGGGGGR    GGGGGST+GGVGYG+GGGEGSG GYGGG+E GY   GGGGGGGSGGG
Sbjct: 61  YGGGGGGGR----GGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGG 120

Query: 121 SGGG----YGPGGGYGSGGGGGSGGGYGSWGS---GNGGGGGGGNGGG-GGYGAGGANGG 180
            GGG    YGP GGYGSG GGGSGGGYG  GS   G GGGGGGGNGGG GGYGAG A+GG
Sbjct: 121 GGGGSGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGG 180

Query: 181 GYGRGGGQGGGSGSGSGGRGGGGGGGSGGGYGGGENGGGYGS-----------------G 240
           GYG GGGQGGGSGSG GG GGGGGGG GGGYG G NGGGYGS                 G
Sbjct: 181 GYGSGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGG 240

Query: 241 GGGGSGGGY-GGGGAQGGGYGAGGGSGEGGGGYAP 247
           GGGGSGGGY GGGGAQGGGYG GGGSG GGGGYAP
Sbjct: 241 GGGGSGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 271

[Close]

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL
Match: A0A6J1E5Z3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39
Identity = 209/269 (77.70%), Postives = 219/269 (81.41%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME H +Q L FFALLG GLASAARTLVAYD  V VPVLG VS+GYG GEGGG+GYG+T G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY--GGGGGGGSGGGS 120
           Y GGGG   GGG GGGGGS  GGVGYG+GGGEGSG GYGGG++ GY  GGGGGGGSGGGS
Sbjct: 61  YAGGGG---GGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGS 120

Query: 121 GGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGGGQG 180
           GGGYGPGGGYGSGGG GSGGGYGS G G GGGGGGG+GGGGGYGAGGANGGGYG GGGQG
Sbjct: 121 GGGYGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQG 180

Query: 181 GGSGSGSGGRGGGGGGGSGGGY-GGGENGGGYGS-----------------GGGGGSGGG 240
           GGSGSG+GG GGGGGGGSGGGY GGG NGGGYGS                 GGGGGSGGG
Sbjct: 181 GGSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGGGGGSGSGAGGHGGGGGGGSGGG 240

Query: 241 YGGGGAQGGGYGAGGGSGEG---GGGYAP 247
           YGGGGAQGGGYGAGGGSG+G   GGGYAP
Sbjct: 241 YGGGGAQGGGYGAGGGSGQGGGHGGGYAP 266

[Close]

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL
Match: A0A6J1L823 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500160 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 209/275 (76.00%), Postives = 219/275 (79.64%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME H ++ L FFALLG GLASAARTLVAYD  V VPVLG VSIGYG GEGGG+GYG+TAG
Sbjct: 13  MENHAIEYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSIGYGGGEGGGSGYGVTAG 72

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY--GGGGGGGSGGGS 120
           Y GGGGGGR    GGGGGS  GGVGYG+GGGEGSG GYGGG++ GY  GGGGGGGSGGGS
Sbjct: 73  YAGGGGGGR----GGGGGSAYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGS 132

Query: 121 GGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGAN------GGGYG 180
           GGGYGPGGGYGSGGG GSGGGYGS G G GGGGGGG+GGGGGYGAGGAN      GGGYG
Sbjct: 133 GGGYGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYG 192

Query: 181 RGGGQGGGSGSGSGGRGGGGGGGSGGGY-GGGENGGGYGSGG-----------------G 240
            GGGQGG SGSG+GG GGGGGGGSGGGY GGG NGGGYGSGG                 G
Sbjct: 193 SGGGQGGSSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGVG 252

Query: 241 GGSGGGYGGGGAQGGGYGAGGGSGEG---GGGYAP 247
           GGSGGGYGGGGAQGGGYGAGGGSG+G   GGGYAP
Sbjct: 253 GGSGGGYGGGGAQGGGYGAGGGSGQGGGHGGGYAP 283

[Close]

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL
Match: A0A0A0L3Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 207/275 (75.27%), Postives = 216/275 (78.55%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME HRVQ LA FALLGLGLASAARTL+AYDG VH PVLGH S+GYG GEG G+GYG++ G
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY---GGGGGGGSGGG 120
           YGGGGGGGR    GGGGGST+GGVGYG+GGGEGSG GYGGG+E GY   GGGGGGGSGGG
Sbjct: 61  YGGGGGGGR----GGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGG 120

Query: 121 SGGG----YGPGGGYGSGGGGGSGGGYGSWGS---GNGGGGGGGNGGG-GGYGAGGANGG 180
            GGG    YGP GGYGSG GGGSGGGYG  GS   G GGGGGGGNGGG GGYGAG A+GG
Sbjct: 121 GGGGSGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGG 180

Query: 181 GYGRGGGQGGGSGSGSGGRGGGGGGGSGGGYGGGENGGGYGS-----------------G 240
           GYG GGGQGGGSGSG GG GGGGGGG GGGYG G NGGGYGS                 G
Sbjct: 181 GYGSGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGGG 240

Query: 241 GGGGSGGGY-GGGGAQGGGYGAGGGSGEGGGGYAP 247
           GGGGSGGGY GGGGAQGGGYG GGGSG GGGGYAP
Sbjct: 241 GGGGSGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 271

[Close]

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL
Match: A0A6J1E9J4 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.6e-33
Identity = 191/251 (76.10%), Postives = 201/251 (80.08%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME H +Q L FFALLG GLASAARTLVAYD  V VPVLG VS+GYG GEGGG+GYG+T G
Sbjct: 1   MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGY--GGGGGGGSGGGS 120
           Y GGGG   GGG GGGGGS  GGVGYG+GGGEGSG GYGGG++ GY  GGGGGGGSGGGS
Sbjct: 61  YAGGGG---GGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGS 120

Query: 121 GGGYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGGGQG 180
           GGGYGPGGGYGSGGG GSGGGYGS G G GGGGGGG+GGGGGYGAGGANGGGYG GGG G
Sbjct: 121 GGGYGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYG 180

Query: 181 GGSGSGSGGRGGGGGGGSGGGYGGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAGGGSG 240
                     GGGGGGGSG G       GG+G GGGGGSGGGYGGGGAQGGGYGAGGGSG
Sbjct: 181 S---------GGGGGGGSGSG------AGGHGGGGGGGSGGGYGGGGAQGGGYGAGGGSG 233

Query: 241 EG---GGGYAP 247
           +G   GGGYAP
Sbjct: 241 QGGGHGGGYAP 233

[Close]

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL
Match: A0A1S4DY03 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103490777 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-23
Identity = 165/222 (74.32%), Postives = 176/222 (79.28%), Query Frame = 0


Query: 1   MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHVPVLGHVSIGYGSGEGGGTGYGITAG 60
           ME HRVQ LA FALLGLGLASAARTL+AYDG V VPVLGH S+GYG GEGGG+GYG++ G
Sbjct: 1   MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60

Query: 61  YGGGGGGGRGGGGGGGGGSTDGGVGYGSGGGEGSGLGYGGGKEGGYGGGGGGGSGGGSGG 120
           YGGGGGGG     GGGGGST+GG GYG+GGGEGSG GYGGG  GG GGGGG G+G  SGG
Sbjct: 61  YGGGGGGGH----GGGGGSTNGG-GYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGG 120

Query: 121 GYGPGGGYGSGGGGGSGGGYGSWGSGNGGGGGGGNGGGGGYGAGGANGGGYGRGGGQGGG 180
           GYG GG  G GGG GSGGG        G GGGGG G GGGYG+GG NGGGYG GGG+GGG
Sbjct: 121 GYGSGG--GQGGGSGSGGG--------GHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGG 180

Query: 181 SGSGSGGRGGGGGGGSGGGY-GGGENGGGYGSGGGGGSGGGY 222
           SGSG+GG GGGGGGGSGGGY GGG  GGGYG GGG G GGGY
Sbjct: 181 SGSGAGGHGGGGGGGSGGGYGGGGAQGGGYGGGGGSGGGGGY 206

The following BLAST results are available for this feature:

BLAST of CcUC10G187590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923391.1	3.3e-39	77.70	glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat...	[more]
XP_023007588.1	2.2e-38	76.00	glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima]	[more]
XP_038903688.1	3.7e-38	80.72	glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]	[more]
XP_023552301.1	9.1e-37	76.95	glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]	[more]
XP_011652713.1	4.5e-36	75.27	glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN55754.1 hypoth...	[more]

BLAST of CcUC10G187590.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5Z3	1.6e-39	77.70	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1L823	1.0e-38	76.00	glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0L3Y5	2.2e-36	75.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1	[more]
A0A6J1E9J4	6.6e-33	76.10	glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch...	[more]
A0A1S4DY03	3.6e-23	74.32	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of CcUC10G187590.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 6..22 score: 30.15 coord: 138..148 score: 43.18 coord: 108..123 score: 63.28 coord: 168..186 score: 40.13
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..214

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC10G187590	CcUC10G187590	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G187590.1-exon	CcUC10G187590.1-exon-CicolChr10:1592196..1592936	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC10G187590.1-cds	CcUC10G187590.1-cds-CicolChr10:1592196..1592936	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC10G187590.1	CcUC10G187590.1-protein	polypeptide