CcUC02G022050.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G022050.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Auxin-responsive protein
Location	CicolChr02: 4418950 .. 4419366 (+)
Sequence length	417
RNA-Seq Expression	CcUC02G022050.1
Synteny	CcUC02G022050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCACCTTCTTCTTCTTCTCTCTCTTAGTACAAGTTCCGTGCTCTCTCCATAAATACCTAACCCTAAACTCCCAATCCCTTTCCAAATCGGACCCCAAAATTCCCCCAAAAATGGCCATTCCGAAACCCGCCGCTCTCAAGCAAATCGTCAAACGCTGCTCAAGCCTAGGCCGGAAGCAAGACGCCACGGCGGCGACATCAGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTTTACGTCGGCGAAAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTCGCCGAGGAGGAATTTGGCTTCCACCACCATATGGGCCTTACAATTCCTTGTGAAGAGGTGGTTTTCCGGTCACTCACCGCCGCCCTCAAATGA

mRNA sequence

ATGGCTCCCACCTTCTTCTTCTTCTCTCTCTTAGTACAAGTTCCGTGCTCTCTCCATAAATACCTAACCCTAAACTCCCAATCCCTTTCCAAATCGGACCCCAAAATTCCCCCAAAAATGGCCATTCCGAAACCCGCCGCTCTCAAGCAAATCGTCAAACGCTGCTCAAGCCTAGGCCGGAAGCAAGACGCCACGGCGGCGACATCAGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTTTACGTCGGCGAAAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTCGCCGAGGAGGAATTTGGCTTCCACCACCATATGGGCCTTACAATTCCTTGTGAAGAGGTGGTTTTCCGGTCACTCACCGCCGCCCTCAAATGA

Coding sequence (CDS)

ATGGCTCCCACCTTCTTCTTCTTCTCTCTCTTAGTACAAGTTCCGTGCTCTCTCCATAAATACCTAACCCTAAACTCCCAATCCCTTTCCAAATCGGACCCCAAAATTCCCCCAAAAATGGCCATTCCGAAACCCGCCGCTCTCAAGCAAATCGTCAAACGCTGCTCAAGCCTAGGCCGGAAGCAAGACGCCACGGCGGCGACATCAGCCTACGACGGCGTTCCCAAGGGACATTTCGCCGTTTACGTCGGCGAAAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTCGCCGAGGAGGAATTTGGCTTCCACCACCATATGGGCCTTACAATTCCTTGTGAAGAGGTGGTTTTCCGGTCACTCACCGCCGCCCTCAAATGA

Protein sequence

MAPTFFFFSLLVQVPCSLHKYLTLNSQSLSKSDPKIPPKMAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

Homology

[Close]

BLAST of CcUC02G022050.1 vs. NCBI nr
Match: KAG7011743.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 38  PKMAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLL 97
           P M IPKPAALK IVKRCSSLGRKQDA A  +AYDGVPKGHFAVYVGENRSRYVVPISLL
Sbjct: 40  PAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLL 99

Query: 98  THPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           THPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 100 THPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 140

[Close]

BLAST of CcUC02G022050.1 vs. NCBI nr
Match: KAG6572079.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 94/101 (93.07%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 38  PKMAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLL 97
           P M IPKPAALK IVKRCSSLGRKQDA A  +AYDGVPKGHFAVYVGENRSRYVVPISLL
Sbjct: 47  PAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLL 106

Query: 98  THPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           THPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 107 THPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 147

[Close]

BLAST of CcUC02G022050.1 vs. NCBI nr
Match: XP_038887253.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATS-AYDGVPKGHFAVYVGENRSRYVVPISLLT 99
           MAIPKPA LKQIVKRCSSLGRKQDATAA + AYDGVPKGHFAVYVGENRSRYVVPISLLT
Sbjct: 1   MAIPKPATLKQIVKRCSSLGRKQDATAAAAPAYDGVPKGHFAVYVGENRSRYVVPISLLT 60

Query: 100 HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 100

[Close]

BLAST of CcUC02G022050.1 vs. NCBI nr
Match: XP_022969389.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 3.5e-46
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTH 99
           M IPKPAALK IVKRCSSLGRKQDATA  +AYDGVPKGHFAVYVG+NRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDATATATAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 100 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of CcUC02G022050.1 vs. NCBI nr
Match: XP_023554806.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 6.0e-46
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTH 99
           M IPKPAALK IVKRCSSLGRKQDA A T+AYDGVPKGHFAVYVGE+RSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDAAATTTAYDGVPKGHFAVYVGEHRSRYVVPISLLTH 60

Query: 100 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 42  IPKPAALKQIVKRCSSLGRKQDATAATSAYD------GVPKGHFAVYVGENRSRYVVPIS 101
           + + A LKQI+KRCSSLG+K         YD       VPKGHF VYVGENRSRY+VPIS
Sbjct: 10  LTQTAMLKQILKRCSSLGKKNG-----GGYDEDCLPLDVPKGHFPVYVGENRSRYIVPIS 69

Query: 102 LLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
            LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Sbjct: 70  FLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-25
Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 39  KMAIPKPAALKQIVKRCSSLGRKQDATAA-----TSAYDGVPKGHFAVYVGENRSRYVVP 98
           K    + A++KQIVKRCSSL + ++               VPKGHF VYVG NRSRY+VP
Sbjct: 8   KATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVP 67

Query: 99  ISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           IS L H +FQ LLRLAEEEFGF H MGLTIPC+EV FRSL +  +
Sbjct: 68  ISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.4e-23
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 47  ALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLL 106
           A+K+I+K+CSS G+  D +      + VPKGHF VYVGE R+RY+VPIS L HP FQ LL
Sbjct: 15  AIKKIIKKCSSFGKNNDDSGLP---NDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLL 74

Query: 107 RLAEEEFGFHHHMGLTIPCEEVVFRS 133
           + +EEEFGF+H MG+ IPC+EV F S
Sbjct: 75  QRSEEEFGFNHDMGIIIPCQEVDFLS 97

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.4e-15
Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 67  ATSAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPC 126
           A++A D  PKG+ AVYVGE   R+V+P+S +  P FQ LL  AEEEFG+ H M GLTIPC
Sbjct: 11  ASNAVD-APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPC 70

Query: 127 EEVVFRSLTAAL 138
            E VF+ +T  L
Sbjct: 71  SEEVFQRITCCL 81

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.7e-15
Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 67  ATSAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPC 126
           A+ A D  PKG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC
Sbjct: 11  ASKAAD-APKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 70

Query: 127 EEVVFRSLTAAL 138
            E VF+ +T+ L
Sbjct: 71  SEDVFQCITSCL 81

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy TrEMBL
Match: A0A6J1I2G2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTH 99
           M IPKPAALK IVKRCSSLGRKQDATA  +AYDGVPKGHFAVYVG+NRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDATATATAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 100 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy TrEMBL
Match: A0A6J1GME7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111455291 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.9e-46
Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTH 99
           M IPKPAALK IVKRCSSLGRKQDA A  +AYDGVPKGHFAVYVGENRSRYVVPISLLTH
Sbjct: 1   MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTH 60

Query: 100 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy TrEMBL
Match: A0A0A0K5S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.5e-45
Identity = 92/99 (92.93%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTH 99
           MAIPKP ALKQIVKRCSSLGRKQD TA   AYDGVPKGHFAVYVG+NRSRYVVPISLLTH
Sbjct: 1   MAIPKPTALKQIVKRCSSLGRKQDPTATPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 100 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy TrEMBL
Match: A0A6J1EKI0 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111435304 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 9.3e-45
Identity = 107/142 (75.35%), Postives = 112/142 (78.87%), Query Frame = 0


Query: 1   MAPTFFFFSLLVQVPCSLHKYLTLNSQSLSKSDPKIPPKMAIPKP----AALKQIVKRCS 60
           MAPT  F SL VQ PCSLHKY       +S        +MAI KP    AALKQIVKRCS
Sbjct: 3   MAPT--FSSLSVQHPCSLHKY------PISFQIGTEIFQMAIRKPAIHTAALKQIVKRCS 62

Query: 61  SLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFH 120
           SLGRKQ+A AA   +D VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFH
Sbjct: 63  SLGRKQEAAAA--GFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFH 122

Query: 121 HHMGLTIPCEEVVFRSLTAALK 139
           HHMGLTIPCEEVVFRSLTAAL+
Sbjct: 123 HHMGLTIPCEEVVFRSLTAALQ 134

[Close]

BLAST of CcUC02G022050.1 vs. ExPASy TrEMBL
Match: A0A1S3BJD0 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490328 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 90/99 (90.91%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 40  MAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTH 99
           MAIPKP +LKQIVKRCSSLGRKQD T+   AYDGVPKGHFAVYVG+NRSRYVVPISLLTH
Sbjct: 1   MAIPKPTSLKQIVKRCSSLGRKQDPTSTPPAYDGVPKGHFAVYVGQNRSRYVVPISLLTH 60

Query: 100 PDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           PDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  PDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of CcUC02G022050.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-30
Identity = 65/100 (65.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 42  IPKPAALKQIVKRCSSLGRKQDATAATSAYD---GVPKGHFAVYVGENRSRYVVPISLLT 101
           + + A +KQI+KRCSSLG+KQ              VPKGHF VYVGENR RYVVPIS LT
Sbjct: 9   LTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRYVVPISFLT 68

Query: 102 HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
            P+FQ LL+ AEEEFGF H MGLTIPCEEVVFRSLT+ L+
Sbjct: 69  RPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of CcUC02G022050.1 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-30
Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 39  KMAIPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLT 98
           K A+ + A+LKQI+KRCSSLG+K         ++ VPKGHF VYVG++RSRYVVPIS L 
Sbjct: 8   KAALSQAASLKQILKRCSSLGKKNQGNC---YFNDVPKGHFPVYVGQHRSRYVVPISWLD 67

Query: 99  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
           H +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL +  +
Sbjct: 68  HHEFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLISMFR 104

[Close]

BLAST of CcUC02G022050.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.5 bits (319), Expect = 8.4e-30
Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 42  IPKPAALKQIVKRCSSLGRKQDATAATSAYD------GVPKGHFAVYVGENRSRYVVPIS 101
           + + A LKQI+KRCSSLG+K         YD       VPKGHF VYVGENRSRY+VPIS
Sbjct: 10  LTQTAMLKQILKRCSSLGKKNG-----GGYDEDCLPLDVPKGHFPVYVGENRSRYIVPIS 69

Query: 102 LLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 139
            LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Sbjct: 70  FLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of CcUC02G022050.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-29
Identity = 63/96 (65.62%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 42  IPKPAALKQIVKRCSSLGRKQDATAATSAYDGVPKGHFAVYVGENRSRYVVPISLLTHPD 101
           + + A LKQI+KRCSSL + Q         D VPKGHF VYVGE RSRY+VPIS LTHP 
Sbjct: 9   LTQTAMLKQILKRCSSLAKNQCYDEDGLPVD-VPKGHFPVYVGEKRSRYIVPISFLTHPK 68

Query: 102 FQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL 138
           F+ LL+ AEEEFGF+H MGLTIPCEEVVFRSLT+ +
Sbjct: 69  FKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of CcUC02G022050.1 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 4.6e-28
Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 48  LKQIVKRCSSLGRKQDAT-AATSAYDG------VPKGHFAVYVGENRSRYVVPISLLTHP 107
           +KQI+KRCSSLG+KQ +    T  +DG      VPKGHF VYVG NR RYV+PIS LT P
Sbjct: 15  IKQILKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYVGGNRVRYVLPISFLTRP 74

Query: 108 DFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL 138
           +FQ LL+ AEEEFGF H+MGLTIPCEEV F+SL  ++
Sbjct: 75  EFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSM 111

The following BLAST results are available for this feature:

BLAST of CcUC02G022050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011743.1	1.6e-46	93.07	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6572079.1	1.6e-46	93.07	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038887253.1	2.7e-46	96.00	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_022969389.1	3.5e-46	93.94	auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-re...	[more]
XP_023554806.1	6.0e-46	93.94	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC02G022050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.2e-28	61.17	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	1.6e-25	57.14	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	7.4e-23	58.14	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33082	7.4e-15	55.56	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	9.7e-15	56.94	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CcUC02G022050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2G2	1.7e-46	93.94	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411...	[more]
A0A6J1GME7	2.9e-46	93.94	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A0A0K5S8	2.5e-45	92.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1	[more]
A0A6J1EKI0	9.3e-45	75.35	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114353...	[more]
A0A1S3BJD0	1.2e-44	90.91	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490328 PE=3 SV=1	[more]

BLAST of CcUC02G022050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75580.1	2.9e-30	65.00	SAUR-like auxin-responsive protein family	[more]
AT4G36110.1	2.9e-30	63.00	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	8.4e-30	61.17	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	4.2e-29	65.63	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	4.6e-28	62.89	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 49..136 e-value: 7.6E-28 score: 96.5
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 40..137
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 40..137

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G022050	CcUC02G022050	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G022050.1-exon	CcUC02G022050.1-exon-CicolChr02:4418950..4419366	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G022050.1-cds	CcUC02G022050.1-cds-CicolChr02:4418950..4419366	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G022050.1	CcUC02G022050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin