Carg23659-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23659-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Calmodulin
Location	Carg_Chr03: 2928872 .. 2929787 (+)
Sequence length	450
RNA-Seq Expression	Carg23659-RA
Synteny	Carg23659-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCAGCTAACGGATGATCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGACGGCGACGGTTCGTTCTATTTCTATTCTCTTTTCTTTTGTTCTGCATTGCTTTTGATCTCATGTTCTCGTCAGTCAGTGTGCCGGATCTCTGGTTTACGTTTCTTCTTTTGGCTTAACTCTGTTTTCCGTTAGATTTTTCTCCTTTATCTATGTTTATCTGTTATTTATACCGATTTTTGTTGTTCATTTCCGGTTTTCTTTATCGTTTTTGTTGTGATTCGTTTCGCTTGATCGAGGATTAGGATTGGCTTCATTAATGTTGTTCGTTCGTGTCGGATCTCTGCATCCTTTAGCGATTCAAGTTTGATTTATAGTTTTGTATGAGCTCGTGAACTCGTGGAATCTCTGTTTTCCAGTGAAGTGATTCTGGATTCTGAGTGAACATTTAAATTACGCTGGATACCAATTAATCCATGACGATATCACGAATTCAGTTCACTCATTTTTTCTTTGCCTTTATATCGATCTTACAGGCTGTATCACAACCAAGGAGCTTGGTACAGTTATGAGGTCGCTAGGTCAGAATCCAACGGAGGCGGAGCTTCAGGACATGATCAATGAGGTCGATGCTGATGGCAATGGAACAATCGACTTTCCAGAGTTCCTAAATCTCATGGCTAGGAAGATGAAGGATACCGACTCGGAGGAGGAGTTGAAAGAGGCATTCCGTGTGTTCGATAAGGATCAGAATGGCTTCATCTCCGCTGCTGAGCTGCGCCATGTGATGACCAATCTCGGTGAGAAACTGACCGAGGAGGAGGTGGATGAGATGATCAGAGAAGCCGATGTGGATGGCGACGGCCAGATTAACTACGACGAATTTGTCAAGGTCATGATGGCCAAGTAA

mRNA sequence

ATGGCGGATCAGCTAACGGATGATCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGACGGCGACGGCTGTATCACAACCAAGGAGCTTGGTACAGTTATGAGGTCGCTAGGTCAGAATCCAACGGAGGCGGAGCTTCAGGACATGATCAATGAGGTCGATGCTGATGGCAATGGAACAATCGACTTTCCAGAGTTCCTAAATCTCATGGCTAGGAAGATGAAGGATACCGACTCGGAGGAGGAGTTGAAAGAGGCATTCCGTGTGTTCGATAAGGATCAGAATGGCTTCATCTCCGCTGCTGAGCTGCGCCATGTGATGACCAATCTCGGTGAGAAACTGACCGAGGAGGAGGTGGATGAGATGATCAGAGAAGCCGATGTGGATGGCGACGGCCAGATTAACTACGACGAATTTGTCAAGGTCATGATGGCCAAGTAA

Coding sequence (CDS)

ATGGCGGATCAGCTAACGGATGATCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGACGGCGACGGCTGTATCACAACCAAGGAGCTTGGTACAGTTATGAGGTCGCTAGGTCAGAATCCAACGGAGGCGGAGCTTCAGGACATGATCAATGAGGTCGATGCTGATGGCAATGGAACAATCGACTTTCCAGAGTTCCTAAATCTCATGGCTAGGAAGATGAAGGATACCGACTCGGAGGAGGAGTTGAAAGAGGCATTCCGTGTGTTCGATAAGGATCAGAATGGCTTCATCTCCGCTGCTGAGCTGCGCCATGTGATGACCAATCTCGGTGAGAAACTGACCGAGGAGGAGGTGGATGAGATGATCAGAGAAGCCGATGTGGATGGCGACGGCCAGATTAACTACGACGAATTTGTCAAGGTCATGATGGCCAAGTAA

Protein sequence

MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEEEVDEMIREADVDGDGQINYDEFVKVMMAK

Homology

[Close]

BLAST of Carg23659-RA vs. NCBI nr
Match: XP_008464615.1 (PREDICTED: calmodulin [Cucumis melo] >XP_022925074.1 calmodulin [Cucurbita moschata] >XP_022950459.1 calmodulin [Cucurbita moschata] >XP_022966473.1 calmodulin [Cucurbita maxima] >XP_023518884.1 calmodulin [Cucurbita pepo subsp. pepo] >XP_023543497.1 calmodulin [Cucurbita pepo subsp. pepo] >XP_031739755.1 calmodulin [Cucumis sativus] >XP_031739756.1 calmodulin [Cucumis sativus] >XP_031739757.1 calmodulin [Cucumis sativus] >XP_038881814.1 calmodulin [Benincasa hispida] >KAG6595454.1 Calmodulin, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027454.1 Calmodulin [Cucurbita argyrosperma subsp. argyrosperma] >KAG6603444.1 Calmodulin, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033628.1 Calmodulin, partial [Cucurbita argyrosperma subsp. argyrosperma] >KGN54503.1 hypothetical protein Csa_012570 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 4.6e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. NCBI nr
Match: XP_022967918.1 (calmodulin-like [Cucurbita maxima])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSE+ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEDELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. NCBI nr
Match: XP_013631799.1 (PREDICTED: calmodulin-like [Brassica oleracea var. oleracea])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. NCBI nr
Match: XP_006340365.2 (PREDICTED: calmodulin-like [Solanum tuberosum])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. NCBI nr
Match: XP_004251248.1 (calmodulin [Solanum lycopersicum])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy Swiss-Prot
Match: P93087 (Calmodulin OS=Capsicum annuum OX=4072 GN=CCM1 PE=2 SV=3)

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy Swiss-Prot
Match: A2WNH1 (Calmodulin-3 OS=Oryza sativa subsp. indica OX=39946 GN=CAM3 PE=3 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 3.0e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy Swiss-Prot
Match: P62200 (Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy Swiss-Prot
Match: P62199 (Calmodulin-1 OS=Petunia hybrida OX=4102 GN=CAM81 PE=1 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy Swiss-Prot
Match: Q7DMN9 (Calmodulin-5/6/7/8 OS=Solanum tuberosum OX=4113 GN=PCM5 PE=1 SV=3)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy TrEMBL
Match: A0A6J1GFV9 (calmodulin OS=Cucurbita moschata OX=3662 GN=LOC111453553 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy TrEMBL
Match: A0A6J1HS95 (calmodulin OS=Cucurbita maxima OX=3661 GN=LOC111466118 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy TrEMBL
Match: A0A0A0KYG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340540 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy TrEMBL
Match: A0A1S3CLW9 (calmodulin OS=Cucumis melo OX=3656 GN=LOC103502454 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. ExPASy TrEMBL
Match: K4DI20 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101256434 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.0e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 292.0 bits (746), Expect = 2.8e-79
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 290.8 bits (743), Expect = 6.2e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. TAIR 10
Match: AT2G27030.1 (calmodulin 5 )

HSP 1 Score: 290.8 bits (743), Expect = 6.2e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. TAIR 10
Match: AT2G27030.3 (calmodulin 5 )

HSP 1 Score: 290.8 bits (743), Expect = 6.2e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of Carg23659-RA vs. TAIR 10
Match: AT3G56800.1 (calmodulin 3 )

HSP 1 Score: 290.8 bits (743), Expect = 6.2e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

The following BLAST results are available for this feature:

BLAST of Carg23659-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464615.1	4.6e-76	100.00	PREDICTED: calmodulin [Cucumis melo] >XP_022925074.1 calmodulin [Cucurbita mosch...	[more]
XP_022967918.1	1.0e-75	99.33	calmodulin-like [Cucurbita maxima]	[more]
XP_013631799.1	1.0e-75	99.33	PREDICTED: calmodulin-like [Brassica oleracea var. oleracea]	[more]
XP_006340365.2	1.0e-75	99.33	PREDICTED: calmodulin-like [Solanum tuberosum]	[more]
XP_004251248.1	1.0e-75	99.33	calmodulin [Solanum lycopersicum]	[more]

BLAST of Carg23659-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93087	1.3e-78	99.33	Calmodulin OS=Capsicum annuum OX=4072 GN=CCM1 PE=2 SV=3	[more]
A2WNH1	3.0e-78	98.66	Calmodulin-3 OS=Oryza sativa subsp. indica OX=39946 GN=CAM3 PE=3 SV=2	[more]
P62200	3.9e-78	98.66	Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2	[more]
P62199	3.9e-78	98.66	Calmodulin-1 OS=Petunia hybrida OX=4102 GN=CAM81 PE=1 SV=2	[more]
Q7DMN9	3.9e-78	98.66	Calmodulin-5/6/7/8 OS=Solanum tuberosum OX=4113 GN=PCM5 PE=1 SV=3	[more]

BLAST of Carg23659-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFV9	2.2e-76	100.00	calmodulin OS=Cucurbita moschata OX=3662 GN=LOC111453553 PE=4 SV=1	[more]
A0A6J1HS95	2.2e-76	100.00	calmodulin OS=Cucurbita maxima OX=3661 GN=LOC111466118 PE=4 SV=1	[more]
A0A0A0KYG1	2.2e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G340540 PE=4 SV=1	[more]
A0A1S3CLW9	2.2e-76	100.00	calmodulin OS=Cucumis melo OX=3656 GN=LOC103502454 PE=4 SV=1	[more]
K4DI20	5.0e-76	99.33	Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101256434 PE=4 SV=1	[more]

BLAST of Carg23659-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43810.1	2.8e-79	98.66	calmodulin 7	[more]
AT2G41110.1	6.2e-79	97.99	calmodulin 2	[more]
AT2G27030.1	6.2e-79	97.99	calmodulin 5	[more]
AT2G27030.3	6.2e-79	97.99	calmodulin 5	[more]
AT3G56800.1	6.2e-79	97.99	calmodulin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 12..40 e-value: 6.9E-8 score: 42.2 coord: 121..149 e-value: 6.1E-9 score: 45.7 coord: 48..76 e-value: 2.5E-8 score: 43.7 coord: 85..113 e-value: 3.1E-8 score: 43.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 12..73 e-value: 2.2E-15 score: 56.9 coord: 83..146 e-value: 7.5E-19 score: 68.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 117..149 score: 15.294476
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 81..116 score: 17.554005
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 44..79 score: 14.5413
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 8..43 score: 16.66135
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 85..147 e-value: 7.07171E-23 score: 83.3661
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 12..74 e-value: 6.48046E-21 score: 78.3585
None	No IPR available	GENE3D	1.10.238.10		coord: 75..123 e-value: 1.2E-26 score: 94.4
None	No IPR available	GENE3D	1.10.238.10		coord: 124..149 e-value: 2.5E-7 score: 32.6
None	No IPR available	GENE3D	1.10.238.10		coord: 1..74 e-value: 2.8E-33 score: 116.0
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 2..149
None	No IPR available	PANTHER	PTHR23050:SF403	CALMODULIN-2	coord: 2..149
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 94..106
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 57..69
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 130..142
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 21..33
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 2..147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg23659	Carg23659	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23659-RA:1	Carg23659-RA:1	exon
Carg23659-RA:2	Carg23659-RA:2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23659-RA:cds	Carg23659-RA:cds	CDS
Carg23659-RA:cds	Carg23659-RA:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg23659-RA	Carg23659-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding