Carg22100-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGAACGCTTTATCGCTTCTGAGTGCGCGGATAGTCTGCAGATTGGTTTCAAGTTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTGGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATGCGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGTTTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGGTTGAGAATTTCAACCACACCGCGAGTTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACGTTATTGATATGTACTTGTGGTGATGCAGGGTTGGCTAGGAAAGTTGTCGTGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCTTATAATGCTATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTCGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCCAGGAACGGATTCTCTCCTGATTGTCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCAGCTTTAAACCTTTTGAACCACATGAGGGAAGTGGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGCTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCACGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGTGAATTCGAGGAAGCTTACACTATGCTCGAAGAAATGGAATCCCGAGGCTGCAATCCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTGAAGGGATATAGAAGATGCTAG200400600800100012001400Expect = 7.4E-11 / Score = 42.1Expect = 2.1E-15 / Score = 56.6Expect = 0.0029 / Score = 15.7Expect = 2.6E-7 / Score = 28.4Expect = 2.6E-4 / Score = 18.9Expect = 5.7E-8 / Score = 30.5Expect = 3.2E-7 / Score = 28.1Expect = 4.5E-12 / Score = 43.4Expect = 3.3E-4 / Score = 20.7Expect = 0.24 / Score = 11.7Score = 10.314641Score = 11.498462Score = 8.79102Score = 12.090371Score = 9.536388Score = 8.582755Score = 14.458013Expect = 1.8E-12 / Score = 49.0Expect = 2.0E-14 / Score = 55.5Expect = 3.5E-17 / Score = 64.5Expect = 1.2E-18 / Score = 69.3Score = Score = Score = Score = SequencePF13041TIGR00756PF01535PS51375PS51375PS51375PS51375PS51375PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10SSF48452PTHR47942:SF3PTHR47942SSF81901
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 254..299
e-value: 7.4E-11
score: 42.1
coord: 358..406
e-value: 2.1E-15
score: 56.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 152..184
e-value: 0.0029
score: 15.7
coord: 328..360
e-value: 5.7E-8
score: 30.5
coord: 291..324
e-value: 2.6E-4
score: 18.9
coord: 396..429
e-value: 4.5E-12
score: 43.4
coord: 257..290
e-value: 2.6E-7
score: 28.4
coord: 361..394
e-value: 3.2E-7
score: 28.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 432..460
e-value: 0.24
score: 11.7
coord: 328..356
e-value: 3.3E-4
score: 20.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 10.314641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 359..393
score: 11.498462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 8.79102
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 12.090371
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..323
score: 9.536388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 429..463
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 394..428
score: 14.458013
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 107..231
e-value: 1.8E-12
score: 49.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 389..460
e-value: 1.2E-18
score: 69.3
coord: 319..388
e-value: 3.5E-17
score: 64.5
coord: 242..318
e-value: 2.0E-14
score: 55.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 363..463
NoneNo IPR availablePANTHERPTHR47942:SF3OS10G0506000 PROTEINcoord: 51..475
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 51..475
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 234..425