Carg21930-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21930-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	N-acetyltransferase domain-containing protein
Location	Carg_Chr11: 3311454 .. 3312408 (-)
Sequence length	873
RNA-Seq Expression	Carg21930-RA
Synteny	Carg21930-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTATCCTTTACCCTCAACTCCAATTTTTTCACCTTCTTCTTCCACGTTCATCTCTCAAGAGGAATTCAATTTATTCCACAAAATCGACAGACAACTCTACACCATACTCACCATCAACATTGGCAGAGACCCCATTGAAGCTCTGCAAATAATGGCGTTTTGGCTATGGCTCGAACGAGCCGGTTTTCGCAACACTGTTTTCCGAATGCTCCAATTGCCACTCAATTTTATCAACGACCTCGCCAATGAAGCCGTCGCCGCTCTCGCCTGCATTGCCTCCGACCACACACCGCCGTCCTCCGATGACCGCAGCAATAATATTCCTCTCACACAAATTTTCATGACCAAGGAAATTTCTCTTCAGATTCTCTATGCCAATCGGACGGCGGCGGTTGAAGGGGTGGCTAAAATTCAGAACGAGGTCTGTTTTAGAGCTATGACAGATATTATGATCACAGCCATTAATCAACGACAACTCGCGGCGGCGGCGGCGGCGGCCCCGTTACCGTCTCAGCCGCCTTCTTTTCATATAGCCGTTGATAGTAGAGATTGGGTGTGTTTTATTTATATTTTTATAAATAAAAAAGTTTAGAAATATTTTTATTAATTTAACATTTTCTTAATAATTTATTAAGGTACCGCCAGATGAAAGAGCAGTTTTTGTAACGTTTTCCAAGGGCTATCCGGTGAATGAGAGGGAGGTTCGAGAATTTTTCACCGTAAACTATGGCGATTGCATACAAATGTTTCAAATGCAAGAAGTAAAGCCAAATGAACAAGCACTGTTTGCTCGTATAGTGTTTTGGTCAGCCGCTACTATAAACGACGTTCTTCAAGGACAGCCGAAAATGAAGTATACTATCAATGGAAAACATATATGGGCTCGAAAGTTTATTCCAAAACCGCCCCTAGCCCCATCCTTGCCTCGGCTTCGACGTAGGTCAGTTTGA

mRNA sequence

ATGGCTTATCCTTTACCCTCAACTCCAATTTTTTCACCTTCTTCTTCCACGTTCATCTCTCAAGAGGAATTCAATTTATTCCACAAAATCGACAGACAACTCTACACCATACTCACCATCAACATTGGCAGAGACCCCATTGAAGCTCTGCAAATAATGGCGTTTTGGCTATGGCTCGAACGAGCCGGTTTTCGCAACACTGTTTTCCGAATGCTCCAATTGCCACTCAATTTTATCAACGACCTCGCCAATGAAGCCGTCGCCGCTCTCGCCTGCATTGCCTCCGACCACACACCGCCGTCCTCCGATGACCGCAGCAATAATATTCCTCTCACACAAATTTTCATGACCAAGGAAATTTCTCTTCAGATTCTCTATGCCAATCGGACGGCGGCGGTTGAAGGGGTGGCTAAAATTCAGAACGAGGTCTGTTTTAGAGCTATGACAGATATTATGATCACAGCCATTAATCAACGACAACTCGCGGCGGCGGCGGCGGCGGCCCCGTTACCGTCTCAGCCGCCTTCTTTTCATATAGCCGTTGATAGTAGAGATTGGGTACCGCCAGATGAAAGAGCAGTTTTTGTAACGTTTTCCAAGGGCTATCCGGTGAATGAGAGGGAGGTTCGAGAATTTTTCACCGTAAACTATGGCGATTGCATACAAATGTTTCAAATGCAAGAAGTAAAGCCAAATGAACAAGCACTGTTTGCTCGTATAGTGTTTTGGTCAGCCGCTACTATAAACGACGTTCTTCAAGGACAGCCGAAAATGAAGTATACTATCAATGGAAAACATATATGGGCTCGAAAGTTTATTCCAAAACCGCCCCTAGCCCCATCCTTGCCTCGGCTTCGACGTAGGTCAGTTTGA

Coding sequence (CDS)

ATGGCTTATCCTTTACCCTCAACTCCAATTTTTTCACCTTCTTCTTCCACGTTCATCTCTCAAGAGGAATTCAATTTATTCCACAAAATCGACAGACAACTCTACACCATACTCACCATCAACATTGGCAGAGACCCCATTGAAGCTCTGCAAATAATGGCGTTTTGGCTATGGCTCGAACGAGCCGGTTTTCGCAACACTGTTTTCCGAATGCTCCAATTGCCACTCAATTTTATCAACGACCTCGCCAATGAAGCCGTCGCCGCTCTCGCCTGCATTGCCTCCGACCACACACCGCCGTCCTCCGATGACCGCAGCAATAATATTCCTCTCACACAAATTTTCATGACCAAGGAAATTTCTCTTCAGATTCTCTATGCCAATCGGACGGCGGCGGTTGAAGGGGTGGCTAAAATTCAGAACGAGGTCTGTTTTAGAGCTATGACAGATATTATGATCACAGCCATTAATCAACGACAACTCGCGGCGGCGGCGGCGGCGGCCCCGTTACCGTCTCAGCCGCCTTCTTTTCATATAGCCGTTGATAGTAGAGATTGGGTACCGCCAGATGAAAGAGCAGTTTTTGTAACGTTTTCCAAGGGCTATCCGGTGAATGAGAGGGAGGTTCGAGAATTTTTCACCGTAAACTATGGCGATTGCATACAAATGTTTCAAATGCAAGAAGTAAAGCCAAATGAACAAGCACTGTTTGCTCGTATAGTGTTTTGGTCAGCCGCTACTATAAACGACGTTCTTCAAGGACAGCCGAAAATGAAGTATACTATCAATGGAAAACATATATGGGCTCGAAAGTTTATTCCAAAACCGCCCCTAGCCCCATCCTTGCCTCGGCTTCGACGTAGGTCAGTTTGA

Protein sequence

MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLERAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEISLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARIVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV

Homology

[Close]

BLAST of Carg21930-RA vs. NCBI nr
Match: KAG7021967.1 (hypothetical protein SDJN02_15695, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 581.3 bits (1497), Expect = 4.8e-162
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE
Sbjct: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI
Sbjct: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIA 180
           SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIA
Sbjct: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIA 180

Query: 181 VDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARI 240
           VDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARI
Sbjct: 181 VDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARI 240

Query: 241 VFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV 291
           VFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV
Sbjct: 241 VFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV 290

[Close]

BLAST of Carg21930-RA vs. NCBI nr
Match: KAG6588081.1 (hypothetical protein SDJN03_16646, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571.6 bits (1472), Expect = 3.8e-159
Identity = 285/286 (99.65%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE
Sbjct: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASD+TPPSSDDRSNNIPLTQIFMTKEI
Sbjct: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDNTPPSSDDRSNNIPLTQIFMTKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIA 180
           SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIA
Sbjct: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIA 180

Query: 181 VDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARI 240
           VDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARI
Sbjct: 181 VDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARI 240

Query: 241 VFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLR 287
           VFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLR
Sbjct: 241 VFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLR 286

[Close]

BLAST of Carg21930-RA vs. NCBI nr
Match: XP_022927316.1 (uncharacterized protein LOC111434179 [Cucurbita moschata])

HSP 1 Score: 560.8 bits (1444), Expect = 6.7e-156
Identity = 282/292 (96.58%), Postives = 284/292 (97.26%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           M YPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE
Sbjct: 1   MGYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI
Sbjct: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAA--PLPSQPPSFH 180
           SLQILYANRTAAVEGVAKIQNEVCFR MTDIMITAINQRQLAAAAA A  PLPSQPPSFH
Sbjct: 121 SLQILYANRTAAVEGVAKIQNEVCFRCMTDIMITAINQRQLAAAAAPAGTPLPSQPPSFH 180

Query: 181 IAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFA 240
           IAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPN+QALFA
Sbjct: 181 IAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNQQALFA 240

Query: 241 RIVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV 291
           RIVFWSAATIN VLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRL  RS+
Sbjct: 241 RIVFWSAATINHVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLPPRSL 292

[Close]

BLAST of Carg21930-RA vs. NCBI nr
Match: XP_023003264.1 (uncharacterized protein LOC111496922 [Cucurbita maxima])

HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148
Identity = 266/291 (91.41%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE
Sbjct: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           RAGF NTV+RML+LPLNFINDLA EAVAALACIASDH PPSSDD SNNIPLTQ FMTKEI
Sbjct: 61  RAGFHNTVYRMLKLPLNFINDLAKEAVAALACIASDHPPPSSDDHSNNIPLTQNFMTKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQL-AAAAAAAPLPSQPPSFHI 180
           SLQILYANRTAAVE VAKIQNEVCFRAMTDIMITAINQRQL A AA   PLP QPPSFHI
Sbjct: 121 SLQILYANRTAAVEAVAKIQNEVCFRAMTDIMITAINQRQLTAVAAVGTPLPPQPPSFHI 180

Query: 181 AVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFAR 240
           A+DSRDWVPPDER++FVTFSKGYPVNEREVREFFTVNYGDCI+MFQMQEV+PN+QALFAR
Sbjct: 181 AIDSRDWVPPDERSIFVTFSKGYPVNEREVREFFTVNYGDCIEMFQMQEVEPNQQALFAR 240

Query: 241 IVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV 291
           IVFWSAATI+ VLQGQPKMK+TINGKHIWARKFIPKPPLAPSLP LRRRS+
Sbjct: 241 IVFWSAATIDHVLQGQPKMKHTINGKHIWARKFIPKPPLAPSLPLLRRRSI 291

[Close]

BLAST of Carg21930-RA vs. NCBI nr
Match: XP_022961076.1 (uncharacterized protein LOC111461694 [Cucurbita moschata])

HSP 1 Score: 389.4 bits (999), Expect = 2.7e-104
Identity = 198/288 (68.75%), Postives = 234/288 (81.25%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MA    S+   S  SSTF+SQ+EFNLFHKIDRQLYTIL INIGRDP+EALQIMAFWLWLE
Sbjct: 1   MASSPSSSLSISLCSSTFVSQQEFNLFHKIDRQLYTILVINIGRDPMEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           R GFR+ V+RMLQLP+  IN+LA+EA+ AL CI SD+ PPSSDD +N+IPLTQ FM KEI
Sbjct: 61  RVGFRHVVYRMLQLPILLINELADEALTALTCIVSDNPPPSSDDYNNSIPLTQNFMKKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPP----- 180
           SLQ LY NR  A+EG+AKI+NEVCFRAM DIM+ AI+ R++  ++ + PLP  PP     
Sbjct: 121 SLQFLYTNRQTAIEGIAKIRNEVCFRAMRDIMLNAISHRKI-PSSVSVPLP--PPSLSFR 180

Query: 181 SFHIAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQA 240
           SF I VD  D VPP+ERA+FVTFSKGYPV E EVR+FFT+NYGDCI+ FQMQEV+PNEQ+
Sbjct: 181 SFDIMVDEGDQVPPEERAMFVTFSKGYPVQEWEVRDFFTINYGDCIEHFQMQEVEPNEQS 240

Query: 241 LFARIVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLP 284
           LFARIVF SA+TI  +L+GQP+MK+TINGKHIWARKFIPK P +P  P
Sbjct: 241 LFARIVFRSASTIGLILRGQPRMKFTINGKHIWARKFIPKHPPSPQPP 285

[Close]

BLAST of Carg21930-RA vs. ExPASy TrEMBL
Match: A0A6J1EHC2 (uncharacterized protein LOC111434179 OS=Cucurbita moschata OX=3662 GN=LOC111434179 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.2e-156
Identity = 282/292 (96.58%), Postives = 284/292 (97.26%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           M YPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE
Sbjct: 1   MGYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI
Sbjct: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAA--PLPSQPPSFH 180
           SLQILYANRTAAVEGVAKIQNEVCFR MTDIMITAINQRQLAAAAA A  PLPSQPPSFH
Sbjct: 121 SLQILYANRTAAVEGVAKIQNEVCFRCMTDIMITAINQRQLAAAAAPAGTPLPSQPPSFH 180

Query: 181 IAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFA 240
           IAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPN+QALFA
Sbjct: 181 IAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNQQALFA 240

Query: 241 RIVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV 291
           RIVFWSAATIN VLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRL  RS+
Sbjct: 241 RIVFWSAATINHVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLPPRSL 292

[Close]

BLAST of Carg21930-RA vs. ExPASy TrEMBL
Match: A0A6J1KSU3 (uncharacterized protein LOC111496922 OS=Cucurbita maxima OX=3661 GN=LOC111496922 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.0e-149
Identity = 266/291 (91.41%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE
Sbjct: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           RAGF NTV+RML+LPLNFINDLA EAVAALACIASDH PPSSDD SNNIPLTQ FMTKEI
Sbjct: 61  RAGFHNTVYRMLKLPLNFINDLAKEAVAALACIASDHPPPSSDDHSNNIPLTQNFMTKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQL-AAAAAAAPLPSQPPSFHI 180
           SLQILYANRTAAVE VAKIQNEVCFRAMTDIMITAINQRQL A AA   PLP QPPSFHI
Sbjct: 121 SLQILYANRTAAVEAVAKIQNEVCFRAMTDIMITAINQRQLTAVAAVGTPLPPQPPSFHI 180

Query: 181 AVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFAR 240
           A+DSRDWVPPDER++FVTFSKGYPVNEREVREFFTVNYGDCI+MFQMQEV+PN+QALFAR
Sbjct: 181 AIDSRDWVPPDERSIFVTFSKGYPVNEREVREFFTVNYGDCIEMFQMQEVEPNQQALFAR 240

Query: 241 IVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLPRLRRRSV 291
           IVFWSAATI+ VLQGQPKMK+TINGKHIWARKFIPKPPLAPSLP LRRRS+
Sbjct: 241 IVFWSAATIDHVLQGQPKMKHTINGKHIWARKFIPKPPLAPSLPLLRRRSI 291

[Close]

BLAST of Carg21930-RA vs. ExPASy TrEMBL
Match: A0A6J1H9C2 (uncharacterized protein LOC111461694 OS=Cucurbita moschata OX=3662 GN=LOC111461694 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.3e-104
Identity = 198/288 (68.75%), Postives = 234/288 (81.25%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MA    S+   S  SSTF+SQ+EFNLFHKIDRQLYTIL INIGRDP+EALQIMAFWLWLE
Sbjct: 1   MASSPSSSLSISLCSSTFVSQQEFNLFHKIDRQLYTILVINIGRDPMEALQIMAFWLWLE 60

Query: 61  RAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEI 120
           R GFR+ V+RMLQLP+  IN+LA+EA+ AL CI SD+ PPSSDD +N+IPLTQ FM KEI
Sbjct: 61  RVGFRHVVYRMLQLPILLINELADEALTALTCIVSDNPPPSSDDYNNSIPLTQNFMKKEI 120

Query: 121 SLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPP----- 180
           SLQ LY NR  A+EG+AKI+NEVCFRAM DIM+ AI+ R++  ++ + PLP  PP     
Sbjct: 121 SLQFLYTNRQTAIEGIAKIRNEVCFRAMRDIMLNAISHRKI-PSSVSVPLP--PPSLSFR 180

Query: 181 SFHIAVDSRDWVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQA 240
           SF I VD  D VPP+ERA+FVTFSKGYPV E EVR+FFT+NYGDCI+ FQMQEV+PNEQ+
Sbjct: 181 SFDIMVDEGDQVPPEERAMFVTFSKGYPVQEWEVRDFFTINYGDCIEHFQMQEVEPNEQS 240

Query: 241 LFARIVFWSAATINDVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLP 284
           LFARIVF SA+TI  +L+GQP+MK+TINGKHIWARKFIPK P +P  P
Sbjct: 241 LFARIVFRSASTIGLILRGQPRMKFTINGKHIWARKFIPKHPPSPQPP 285

[Close]

BLAST of Carg21930-RA vs. ExPASy TrEMBL
Match: A0A6J1JEA0 (uncharacterized protein LOC111485004 OS=Cucurbita maxima OX=3661 GN=LOC111485004 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.2e-104
Identity = 193/274 (70.44%), Postives = 227/274 (82.85%), Query Frame = 0


Query: 15  SSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLERAGFRNTVFRMLQL 74
           SSTF+SQ+EFNLFHKIDRQLYTIL INIGRDP+EALQIMAFWLWLER GFR+ V+RMLQL
Sbjct: 17  SSTFVSQQEFNLFHKIDRQLYTILVINIGRDPMEALQIMAFWLWLERVGFRHVVYRMLQL 76

Query: 75  PLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEISLQILYANRTAAVE 134
           P+  IN+LA+EA+ AL CI SD+ PPSSDD +N+IPLTQ FM KEISLQ LYANR  A+E
Sbjct: 77  PVLLINELADEALTALTCIVSDNPPPSSDDYNNSIPLTQNFMKKEISLQFLYANRQIAME 136

Query: 135 GVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPP-----SFHIAVDSRDWVPP 194
           G+ KI NEVCFRAM DIM+ AI+ R++  ++ + PLP  PP     SF I +D  D VPP
Sbjct: 137 GITKILNEVCFRAMRDIMLNAISHRKI-PSSVSVPLPPPPPPLSFRSFDIMMDEGDQVPP 196

Query: 195 DERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARIVFWSAATIN 254
           +ERA+FVTFSKGYPV E EVR+FFT+NYGDCI+ FQMQEV+PNEQ+LFARIVF SA+TI 
Sbjct: 197 EERAMFVTFSKGYPVQEWEVRDFFTINYGDCIEHFQMQEVEPNEQSLFARIVFRSASTIG 256

Query: 255 DVLQGQPKMKYTINGKHIWARKFIPKPPLAPSLP 284
            +L GQP+MK+TINGKHIWARKFIPK P +P  P
Sbjct: 257 LILGGQPRMKFTINGKHIWARKFIPKHPPSPQPP 289

[Close]

BLAST of Carg21930-RA vs. ExPASy TrEMBL
Match: A0A1S3BRL9 (uncharacterized protein LOC103492537 OS=Cucumis melo OX=3656 GN=LOC103492537 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 3.2e-103
Identity = 201/283 (71.02%), Postives = 228/283 (80.57%), Query Frame = 0


Query: 7   STPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLERAGFRN 66
           ST   SPSSSTF+SQEEFNLFHKIDRQLYTIL I+IGRDPIE+LQIMAFWLWLER GFR+
Sbjct: 6   STSPCSPSSSTFVSQEEFNLFHKIDRQLYTILAISIGRDPIESLQIMAFWLWLERVGFRH 65

Query: 67  TVFRMLQLPLNFINDLANEAVAALACIASDH-TPPSSDDRSNNIPLTQIFMTKEISLQIL 126
            VFR+L+LP+  IN+LA EA+ ALACI SDH  PP SD+ +NNIPLTQ FM KEISLQ L
Sbjct: 66  VVFRLLRLPILLINELAEEALTALACIVSDHPPPPPSDEYNNNIPLTQNFMKKEISLQFL 125

Query: 127 YANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIAVDSRD 186
           YANR  A EGVAKI+NEVCFRAM DIMI AI+ RQ++ AAAA   P  PPS     D + 
Sbjct: 126 YANRHTAFEGVAKIRNEVCFRAMKDIMIQAISHRQISTAAAAVTAPPPPPSG--VGDLQT 185

Query: 187 WVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARIVFWSA 246
            VPP+ERA+FVTFSKGYPV+E EVREFF  NYGDCI+ FQMQEV+ NEQALFARIVF   
Sbjct: 186 QVPPEERAMFVTFSKGYPVHEWEVREFFNTNYGDCIENFQMQEVEANEQALFARIVFKFP 245

Query: 247 ATINDVLQGQPKMKYTINGKHIWARKFIPK-----PPLAPSLP 284
           +TI+ +L+GQP+MK+TINGKHIWARKFIPK     PP  PS P
Sbjct: 246 STIDLILRGQPRMKFTINGKHIWARKFIPKQRSSPPPPPPSPP 286

[Close]

BLAST of Carg21930-RA vs. TAIR 10
Match: AT5G13620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 99/294 (33.67%), Postives = 165/294 (56.12%), Query Frame = 0


Query: 12  SPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLERAGF-RNTVFR 71
           S SS+  ++++EFN FHK DR L+    + + RD  ++LQ+M+F L+LE++G   N +  
Sbjct: 3   SSSSAVAVTRDEFNAFHKCDRALFRRFVVRLRRDINQSLQVMSFLLYLEKSGLVSNLIVN 62

Query: 72  MLQLPLNFINDLANEAVAALACIASDH-TPPSSDDRSNNIPLTQIFMTKEISLQILYANR 131
              LP  FIN +A+E V  L+C++ ++ +   ++     IPL      + ++L +++ NR
Sbjct: 63  FNSLPDFFINTVADEVVMCLSCLSYENFSMFVANFGKKIIPLITRMTGEYLTLAVIHQNR 122

Query: 132 TAAVEGVAKIQNEVCFRAMTDIMITAINQRQL-------------AAAAAAAPLPSQPPS 191
            + +  + K    +C+ A  DI + A  ++ +              A +++  L  Q  +
Sbjct: 123 ESILLDMKKHLTSICYPAFEDICVQAEKEKVIEDMKHLGFSKAVHKAGSSSQFLSEQQAT 182

Query: 192 FH---IAVDSRD-WVPPDERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPN 251
                + V S D     D+R VF+TFS+GYP++E EV  +FT  +G+ I+   M   + N
Sbjct: 183 TRTSKVGVFSEDEQAREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGN 242

Query: 252 EQALFARIVFWSAATINDVL-QGQPKMKYTINGKHIWARKFIPKPP----LAPS 282
           EQAL+A++V  SAA I +++  G  + KYTINGKH+WARK+IP+      LAPS
Sbjct: 243 EQALYAKMVLHSAAMIPEIVSDGIERNKYTINGKHVWARKYIPRSSINNNLAPS 296

[Close]

BLAST of Carg21930-RA vs. TAIR 10
Match: AT1G64870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-36
Identity = 103/299 (34.45%), Postives = 149/299 (49.83%), Query Frame = 0


Query: 22  EEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLERAGFRNTVFRMLQLPLNFIND 81
           E+ + FH  +R++++ L   + R P E+L +MA WLW E  GF N    +       I D
Sbjct: 7   EQLHAFHAQEREIFSKLVQKLRRPPAESLLVMATWLWFEDFGFGNIFSIITVFSDLLIVD 66

Query: 82  LANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEISLQILYANRTAAVEGVAKIQN 141
           LANEAV    C+ SD  P    +  + IPLT+ FM  +ISLQI++ +R  A+ G+     
Sbjct: 67  LANEAVLCFRCLESDQPP----NDVSQIPLTERFMKNDISLQIIHNHRYTAITGIKNFLT 126

Query: 142 EVCFRAMTDIMITAINQRQLAAAAAA--------APLPSQP-PSFHIA-----VDSRDWV 201
            +C R  +DI+     QR L +++++          +P  P P+F        + +RD +
Sbjct: 127 TICSRIFSDIL-----QRVLPSSSSSFITNLRHPLIIPGFPHPTFGSINVLPNIVARDNL 186

Query: 202 P---------------------PDERAVFVTFSKGYPVNEREVREFFTVNYG-DCIQMFQ 261
           P                       ER VF+TFS+G+PV+  EV   FT  YG DC++   
Sbjct: 187 PNANSFLFPHGLWGWNANHVATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVY 246

Query: 262 MQEVKPN------------EQALFARIVFWSAATINDVLQGQPKMKYTINGKHIWARKF 273
           M E   N            +Q LFA++V  S  T++ +L GQ K KY INGKHIWARKF
Sbjct: 247 MPEDGGNSSNDNTNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKF 296

[Close]

BLAST of Carg21930-RA vs. TAIR 10
Match: AT3G45200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 95 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-36
Identity = 95/301 (31.56%), Postives = 145/301 (48.17%), Query Frame = 0


Query: 17  TFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLERAGFRNTVFRMLQLPL 76
           + ++ +E ++FH  DR++++ L +   R P E+L +MA WLWLE  GF N    +L L  
Sbjct: 2   SLLNAQELHVFHAQDREIFSKLVLKFSRPPAESLLVMATWLWLEDFGFENIFSIILTLTD 61

Query: 77  NFINDLANEAVAALACIASDHTPPSSDDRSNNIPLTQIFMTKEISLQILYANRTAAVEGV 136
             I  LA EAV+   C++ ++ P         IPLT  ++ K ISLQ++Y NR +A+ G+
Sbjct: 62  PLIAGLAYEAVSCFQCLSLNNPP------IGRIPLTTKYLKKNISLQMIYKNRYSAITGI 121

Query: 137 AKIQNEVCFRAMTDIMITAINQRQLAAAAAAAPLPSQPPSFHIAVDSRDWVPPDE----- 196
                 VC R  TDI++  +    +++  A    P Q P F   +     V P+E     
Sbjct: 122 KNFLTTVCTRIFTDILLRVLPPSSMSSFDARLRQPLQIPGFPHPIFGSINVMPNEVDRDN 181

Query: 197 ----------------------------RAVFVTFSKGYPVNEREVREFFTVNYGD-CIQ 256
                                       R +F+TFS+GYPV   E+ E FT  YG+ C++
Sbjct: 182 FSNKNNNLFFIPNGLWGWNANCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVE 241

Query: 257 MFQMQEVKP-----------NEQALFARIVFWSAATINDVLQGQPKMKYTINGKHIWARK 273
              MQ                +Q+LFAR+V  S  T++ VL  + K +  I GK+IWARK
Sbjct: 242 GVYMQHDNKRSFNANANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWARK 296

[Close]

BLAST of Carg21930-RA vs. TAIR 10
Match: AT1G49290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 149.4 bits (376), Expect = 4.3e-36
Identity = 103/334 (30.84%), Postives = 170/334 (50.90%), Query Frame = 0


Query: 1   MAYPLPSTPIFSPSSSTFISQEEFNLFHKIDRQLYTILTINIGRDPIEALQIMAFWLWLE 60
           MA PL  + + +P SS  ++++EFN FH IDR L++ L  N+ RD  ++   M F L+LE
Sbjct: 1   MASPLYPSVLNNPLSSIVVTRDEFNAFHTIDRTLFSRLVFNLNRDVDQSFLAMCFLLFLE 60

Query: 61  RAGF-RNTVFRMLQLPLNFINDLANEAVAALACI-----ASDHTPPSSDDRSNNIPLTQI 120
           ++ + R+ +  ++ LP  F++ +ANE    +  +     AS      +DD S  IPL   
Sbjct: 61  QSSYARDIIAYLVSLPNAFVDAVANEIGVCINLLYNVEFASTFFAADNDDNS-MIPLLLR 120

Query: 121 FMTKEISLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITA------------------- 180
               + +L+++   R     GV K   +VC RA +D+  TA                   
Sbjct: 121 ITGGKFTLRLINQQRKNFCAGVTKSWTDVCTRAFSDLCETAHRINREKQLALEREKFIED 180

Query: 181 ---------------INQRQLAAAAAAAPLPSQPPSFH----------IAVDSRDWV-PP 240
                          ++ +Q+  A+   P P  P              + V  ++ V   
Sbjct: 181 MKKLRLSLQQEKSNRLSVQQVKIASPPPPRPHPPVEDETEKALREKETMEVKEKEGVLAA 240

Query: 241 DERAVFVTFSKGYPVNEREVREFFTVNYGDCIQMFQMQEVKPNEQALFARIV--FWSAAT 282
           D+R VF+TFSKGYP++E EVR +FT  +G+ I+  +MQEV+ NEQ LFA++V     A+ 
Sbjct: 241 DDRTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVEANEQPLFAKMVMKLQCASM 300

[Close]

BLAST of Carg21930-RA vs. TAIR 10
Match: AT5G11220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-28
Identity = 86/263 (32.70%), Postives = 126/263 (47.91%), Query Frame = 0


Query: 53  MAFWLWLERAGFRNTVFRMLQLPLNFINDLANEAVAALACIASDHTPPSSDDRSNNIPLT 112
           MA W WLE    +N +  +L L    I  LANEAV    C+ S   P    +  N IPLT
Sbjct: 1   MATWFWLEDFFSQNILSTILALSDPVIMALANEAVLCFQCLDSAEQP----NDFNQIPLT 60

Query: 113 QIFMTKEISLQILYANRTAAVEGVAKIQNEVCFRAMTDIMITAINQRQ----LAAAAAAA 172
              + K+ISLQI + +R +A+ G+      VC R  +DI+  A+        +       
Sbjct: 61  AELLAKDISLQIFHKHRYSAIAGIRNFLTTVCSRIFSDILQRALPPSSSYPFVTRLRHPL 120

Query: 173 PLPSQP-PSFHIAVDSRDWVPPD--------------------------ERAVFVTFSKG 232
            +P  P P+F       D V  D                          ER +F+TFS+G
Sbjct: 121 IIPGFPHPTFGSINVMHDVVVGDNLYNNNLFPCSHGLWGWNASCIATDNERTMFITFSRG 180

Query: 233 YPVNEREVREFFTVNYGD-CIQMFQMQEVKPN-----------EQALFARIVFWSAATIN 273
           +PV++ EV+ FFT NYG+ C++   M+E   N           +Q+LFA++V  S AT++
Sbjct: 181 FPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQSLFAKLVLNSVATVD 240

The following BLAST results are available for this feature:

BLAST of Carg21930-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021967.1	4.8e-162	100.00	hypothetical protein SDJN02_15695, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6588081.1	3.8e-159	99.65	hypothetical protein SDJN03_16646, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927316.1	6.7e-156	96.58	uncharacterized protein LOC111434179 [Cucurbita moschata]	[more]
XP_023003264.1	1.0e-148	91.41	uncharacterized protein LOC111496922 [Cucurbita maxima]	[more]
XP_022961076.1	2.7e-104	68.75	uncharacterized protein LOC111461694 [Cucurbita moschata]	[more]

BLAST of Carg21930-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21930-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHC2	3.2e-156	96.58	uncharacterized protein LOC111434179 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A6J1KSU3	5.0e-149	91.41	uncharacterized protein LOC111496922 OS=Cucurbita maxima OX=3661 GN=LOC111496922...	[more]
A0A6J1H9C2	1.3e-104	68.75	uncharacterized protein LOC111461694 OS=Cucurbita moschata OX=3662 GN=LOC1114616...	[more]
A0A6J1JEA0	2.2e-104	70.44	uncharacterized protein LOC111485004 OS=Cucurbita maxima OX=3661 GN=LOC111485004...	[more]
A0A1S3BRL9	3.2e-103	71.02	uncharacterized protein LOC103492537 OS=Cucumis melo OX=3656 GN=LOC103492537 PE=...	[more]

BLAST of Carg21930-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13620.1	1.0e-37	33.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64870.1	2.5e-36	34.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G45200.1	3.3e-36	31.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G49290.1	4.3e-36	30.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G11220.1	7.4e-28	32.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33527	OS07G0274300 PROTEIN	coord: 185..278 coord: 5..163
None	No IPR available	PANTHER	PTHR33527:SF28	GB\|AAD43168.1	coord: 185..278 coord: 5..163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21930	Carg21930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21930-RA:2	Carg21930-RA:2	exon
Carg21930-RA:1	Carg21930-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21930-RA:cds	Carg21930-RA:cds_2	CDS
Carg21930-RA:cds	Carg21930-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21930-RA	Carg21930-RA-protein	polypeptide