Carg21157-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21157-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	flowering-promoting factor 1-like protein 1
Location	Carg_Chr01: 10972806 .. 10973162 (+)
Sequence length	357
RNA-Seq Expression	Carg21157-RA
Synteny	Carg21157-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATGCGCCTCGTGGAAAACTCCCAAGCCGGCGGCGGCACCGGCACCGGCGCGGACTACTCCTCCGGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGCGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

mRNA sequence

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATGCGCCTCGTGGAAAACTCCCAAGCCGGCGGCGGCACCGGCACCGGCGCGGACTACTCCTCCGGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGCGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

Coding sequence (CDS)

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATGCGCCTCGTGGAAAACTCCCAAGCCGGCGGCGGCACCGGCACCGGCGCGGACTACTCCTCCGGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGCGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

Protein sequence

MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP

Homology

[Close]

BLAST of Carg21157-RA vs. NCBI nr
Match: XP_022940479.1 (flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >KAG7037549.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 8.7e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60

Query: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 119
           LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP
Sbjct: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 118

[Close]

BLAST of Carg21157-RA vs. NCBI nr
Match: KAG6608191.1 (Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.6 bits (623), Expect = 4.3e-61
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVFRSNGVMRLVENSQAGG TGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGGSTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60

Query: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 119
           LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP
Sbjct: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 118

[Close]

BLAST of Carg21157-RA vs. NCBI nr
Match: XP_022982497.1 (flowering-promoting factor 1-like protein 2 [Cucurbita maxima])

HSP 1 Score: 234.6 bits (597), Expect = 4.5e-58
Identity = 115/124 (92.74%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSS------GGGGRKKVLVHLPSGQPVCSY 60
           MSGVWVFRSNGVMRLVE+SQAG GTGTGADYSS      GGGGRKKVLVHLPSGQPVCSY
Sbjct: 1   MSGVWVFRSNGVMRLVEHSQAGAGTGTGADYSSSGGGGGGGGGRKKVLVHLPSGQPVCSY 60

Query: 61  GFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 119
           GFLEKILEGLGWERYYEGDPD FQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH
Sbjct: 61  GFLEKILEGLGWERYYEGDPDFFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 120

[Close]

BLAST of Carg21157-RA vs. NCBI nr
Match: XP_023524426.1 (flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.7 bits (587), Expect = 6.5e-57
Identity = 115/122 (94.26%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGG--GTGTGADYSS--GGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVFRSNGV+RLVENSQAG   GTGTGADYSS   GGGRKKVLVHLPSGQPVCSYGF
Sbjct: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 119
           LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR
Sbjct: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120

[Close]

BLAST of Carg21157-RA vs. NCBI nr
Match: XP_004136318.1 (flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypothetical protein Csa_002053 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 6.9e-51
Identity = 102/123 (82.93%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAG-----GGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVFRSNGVMRLVENSQAG      G G    +  GGGGRKKVLVHLPSGQPVCSYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 119
           FL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

[Close]

BLAST of Carg21157-RA vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGG-----RKKVLVHLPSGQPVCSYG 60
           MSGVWVF  NGVMRLVEN       G  ++ SS GG      R+K+LVHLPS + V SYG
Sbjct: 1   MSGVWVFNKNGVMRLVENPY-NQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYG 60

Query: 61  FLEKILEGLGWERYYEGD--PDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVF 118
            LEKIL+ LGWERYY GD    L QFHK +SIDLISLP +FSKFNS++MYD+VVKNPNVF
Sbjct: 61  SLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVF 120

[Close]

BLAST of Carg21157-RA vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.0e-36
Identity = 76/117 (64.96%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVF +NGV+RLVEN    GG  T +       GR+ VLV+LP+G+ V SY  LE+I
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVSTQSH------GRRNVLVYLPTGEAVSSYSSLEQI 60

Query: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVRE 118
           L  LGWERY+ GD DL Q+HK SSIDLISLP +FSKFNSVYMYD+VVKNPN FHVR+
Sbjct: 61  LRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of Carg21157-RA vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-33
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVEN-SQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEK 60
           MSGVWVF+ NGV+RLVEN +Q+GG T +          R+KV+V+LP+G+ + SY  LE+
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGGDTNS----------RRKVMVYLPTGEVISSYSTLEQ 60

Query: 61  ILEGLGWERYY-EGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVRE 118
           IL  LGWERY+  GD DL QFHK SSIDLISLP +F+KF+SVYMYD+VVKNPN FHVR+
Sbjct: 61  ILRSLGWERYFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of Carg21157-RA vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.8e-33
Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVF+ NGV+RLVEN    G         S    R+KV+V+LP+G+ V SY  LE+I
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSG---------SDTQNRRKVMVYLPTGEVVSSYSTLEQI 60

Query: 61  LEGLGWERYY-EGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVRE 118
           L+ LGWERY+  GD DL QFHK SSIDLISLP +F+KFNSVYMYD+VVKNPN FHVR+
Sbjct: 61  LQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of Carg21157-RA vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-30
Identity = 72/115 (62.61%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVF+ NGV+RLVE  QA  GT          GGR+K LVH PSGQ V SY  LE  
Sbjct: 1   MSGVWVFK-NGVVRLVEKQQATAGTAV-------AGGRRKALVHTPSGQVVSSYAALEAR 60

Query: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 116
           L  LGWERYYE DP LFQFHK  S+DLISLP +FS F+SV+MYD+VVKN + F V
Sbjct: 61  LTALGWERYYE-DPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRV 106

[Close]

BLAST of Carg21157-RA vs. ExPASy TrEMBL
Match: A0A6J1FKC3 (flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111446065 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.2e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60

Query: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 119
           LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP
Sbjct: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 118

[Close]

BLAST of Carg21157-RA vs. ExPASy TrEMBL
Match: A0A6J1IWR8 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111481300 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 115/124 (92.74%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSS------GGGGRKKVLVHLPSGQPVCSY 60
           MSGVWVFRSNGVMRLVE+SQAG GTGTGADYSS      GGGGRKKVLVHLPSGQPVCSY
Sbjct: 1   MSGVWVFRSNGVMRLVEHSQAGAGTGTGADYSSSGGGGGGGGGRKKVLVHLPSGQPVCSY 60

Query: 61  GFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 119
           GFLEKILEGLGWERYYEGDPD FQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH
Sbjct: 61  GFLEKILEGLGWERYYEGDPDFFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 120

[Close]

BLAST of Carg21157-RA vs. ExPASy TrEMBL
Match: A0A0A0LHE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 102/123 (82.93%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAG-----GGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVFRSNGVMRLVENSQAG      G G    +  GGGGRKKVLVHLPSGQPVCSYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 119
           FL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

[Close]

BLAST of Carg21157-RA vs. ExPASy TrEMBL
Match: A0A6J1IMX4 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111476674 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50
Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGG-TGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEK 60
           MSGVWVFRSNGVMRLVEN+QAGG  +  G  +   GGGRKK+LVHLPSGQPV SYGFL+K
Sbjct: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHNGGGRKKILVHLPSGQPVTSYGFLQK 60

Query: 61  ILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP 119
           ILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YMYDLVVKNPNVFHVREP
Sbjct: 61  ILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP 119

[Close]

BLAST of Carg21157-RA vs. ExPASy TrEMBL
Match: A0A5A7UF14 (Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64983G00010 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50
Identity = 102/129 (79.07%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADY-----------SSGGGGRKKVLVHLPSGQ 60
           MSGVWVFRSNGVMRLVENSQAG    +   +             GGGGRKKVLVHLPSGQ
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGGGRKKVLVHLPSGQ 60

Query: 61  PVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKN 119
           PVCSYGFL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YMYDLVVKN
Sbjct: 61  PVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120

[Close]

BLAST of Carg21157-RA vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 153.7 bits (387), Expect = 9.3e-38
Identity = 80/124 (64.52%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGG-----RKKVLVHLPSGQPVCSYG 60
           MSGVWVF  NGVMRLVEN       G  ++ SS GG      R+K+LVHLPS + V SYG
Sbjct: 58  MSGVWVFNKNGVMRLVENPY-NQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYG 117

Query: 61  FLEKILEGLGWERYYEGD--PDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVF 118
            LEKIL+ LGWERYY GD    L QFHK +SIDLISLP +FSKFNS++MYD+VVKNPNVF
Sbjct: 118 SLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVF 177

[Close]

BLAST of Carg21157-RA vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 3.5e-37
Identity = 76/117 (64.96%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVF +NGV+RLVEN    GG  T +       GR+ VLV+LP+G+ V SY  LE+I
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVSTQSH------GRRNVLVYLPTGEAVSSYSSLEQI 60

Query: 61  LEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVRE 118
           L  LGWERY+ GD DL Q+HK SSIDLISLP +FSKFNSVYMYD+VVKNPN FHVR+
Sbjct: 61  LRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of Carg21157-RA vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 141.4 bits (355), Expect = 4.8e-34
Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENSQAGGGTGTGADYSSGGGGRKKVLVHLPSGQPVCSYGFLEKI 60
           MSGVWVF+ NGV+RLVEN    G         S    R+KV+V+LP+G+ V SY  LE+I
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSG---------SDTQNRRKVMVYLPTGEVVSSYSTLEQI 60

Query: 61  LEGLGWERYY-EGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVRE 118
           L+ LGWERY+  GD DL QFHK SSIDLISLP +F+KFNSVYMYD+VVKNPN FHVR+
Sbjct: 61  LQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

The following BLAST results are available for this feature:

BLAST of Carg21157-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940479.1	8.7e-62	100.00	flowering-promoting factor 1-like protein 2 [Cucurbita moschata] >KAG7037549.1 F...	[more]
KAG6608191.1	4.3e-61	99.15	Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma sub...	[more]
XP_022982497.1	4.5e-58	92.74	flowering-promoting factor 1-like protein 2 [Cucurbita maxima]	[more]
XP_023524426.1	6.5e-57	94.26	flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_004136318.1	6.9e-51	82.93	flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypoth...	[more]

BLAST of Carg21157-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5Q0B3	1.3e-36	64.52	Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q9LXB5	5.0e-36	64.96	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
O24340	3.0e-33	62.18	Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1	[more]
O23624	6.8e-33	62.71	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]
Q9LGE3	2.4e-30	62.61	Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Carg21157-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKC3	4.2e-62	100.00	flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IWR8	2.2e-58	92.74	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0LHE6	3.3e-51	82.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1	[more]
A0A6J1IMX4	1.7e-50	84.03	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7UF14	2.2e-50	79.07	Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg21157-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31380.1	9.3e-38	64.52	FPF1-like protein 1	[more]
AT5G10625.1	3.5e-37	64.96	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT5G24860.1	4.8e-34	62.71	flowering promoting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..117
None	No IPR available	PANTHER	PTHR33433:SF15	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2	coord: 1..117

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21157	Carg21157	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21157-RA:1	Carg21157-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21157-RA:cds	Carg21157-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21157-RA	Carg21157-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem