Carg09584-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09584-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	TPR_REGION domain-containing protein
Location	Carg_Chr17: 6960871 .. 6963082 (+)
Sequence length	1697
RNA-Seq Expression	Carg09584-RA
Synteny	Carg09584-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACTCTTTTGTCTCTGACACTTTGGTTCCATAAACTCCCATCAATAATTCTCACCCAATGCTTTGACTTCATAGTTCCACCTTCTTCTTCAATCCCATCTCCCAAAATTCCTTATTTCAAAGCCTACAAGCATGCTGTTGAGAAGTTCTTCAACCCCAATTTTCAATTCTTGGCTTCACCAAACCAAATCCTCCCCTTCAGAATCGGACCAAGTCCACCAGCTTCAAAGAACCAAGTCCCTCTCATTTCACCCTCCTCCAGTGCCTTTATTGAAAGAATCGGCGAACAGAGTTACTCAGAACTTGCTCGACTCAGATTCGGCAGATCCCAGAAAGAAGATTCCGGTACCGAGGAGTTGTAAAGCTCGATCAAAAGTGAAATCCAGGGAGAATGGAGTACCAGTTCGAGACCAAGAGCTCAAACCGGCGTTGGATTCGTCTTCGTCTTCGATTCATGGAGTGTTTTCCAATTCTGGGTTGGGTTTGAAATCTCCAAATGATGAAGTTCGCGATGAGAAGAGGGATGCATGTGTTCTGCAAACGCTGGTAGTCGGCGGTGGTATGGGGAGCGACGGCGGCCGGGTCTGTGGCGGCGGAAGAGGTTCGGACGGTGGTGGTGGAGGGGATAATGGTAGGTCAGGGTTTAACAATCACCATGGAAGCAATAGCACCGATGCTTATTATCAGAAGATGATTGAAGCGAACCCAAACAACGCTCTTCTACTAGGAAATTATGCCAAGTTCTTGAAAGAGGTACTTTGGTTATCTTGTAATCTCCTGGAAAATTCTTCAATGGCTGACGCTTCTGATTATGCTCTTCAATTTAGGTCCATGGAGATTTTTCCAAAGCCGAAGAGTTTTGTGGAAGGGCAATTCTGGCTGATCCGAACGATGCAAATATTCTATCGCTATATGCCGATCTGATTTGGCATACACAGAAGGATGCTCAACGAGCTGAGTCATATTTTGATCAAGCTGTTAAAAGTTCGCCAGATGATTGGTAAGAATAGATTAAAATTTCAGCTTGAGAACTGATTGATTCTGGTTTAATTTCCTAGAAAGAGATTTTGTTGTCTGGTGATTAATTCGTTTACTTTTGATTGTTCTTGATAATAGATCAATTTGATTTCGACATGAATTCAAGAACTTGAACAGATCATAACTTCAATGTCAATCCATTTACTTAAAATTCATTGGTTGTGAACATTCCAATCTGATTCTGGCTTGTATCTTTTCTTCAAGATTTGAGAAATTGATCTTCGTTACCATGTGGTGTAGTCTAGTTGTCATCAATTTAAATCAATTACATTTTATAATCAGAATCTCCCAGTTAAACTTTGAAAAGGATAGAGTATTTCATAAGTCTTTGTTTCTCTGTTTATGATATTGTTTCAATTCAAAGTTAATTTGGTTGTCACAAAATCTTCTTCTCTGTCTACAGCTATCTCCTAGCTTCATATGCACAGTTTCTTTGGAATGCCGATGTCGATGAAGATGACAATCCAGCAGACCAGTATGAAACAGAGGAAAGCTGCCCGTCTCCGCCTGGTTTCGCTCATGGAGCTCCTCACCATTCTCCTCTGGCTGCAGCTTCATAATCTCACGAAATAGGTAGCACTCTACTTCCCACTGTAAGATAACTAAAATAAAGCATCAGCTCATTACCCTCTTTTGCTTTTAGAGTATATGTAATTTTGGCAGAATGAGTATGATTCTCTAACTGTAACCTTTCTATTACTTATCTTATGTAAAAAGTGAATAAATAAAGCTTCTCTGGCCTTTTTCCAGTATGTTGTATAGAGGAAGATTTAGTATCATCTTTCTTTCTAGCACTTGTTTTTCCCTTGTGATAAAATTACTAATCTGAAGGATTTGTCGGTAACAACTGAACGGTCGAGATTGGACGTGGGTGTACAAGCCCCCGATCCCGATCCGAGTATGAGGAACTATGTGTTTGATTAAAGAATGAAAAAGATAAAGTTGGTAGTATTTAGTACTTGATTTGGTTGGCATAGTGGAAGATTATAAGGATAGATTGGGTTGCAAATTGTAGCAAGATCTTTTTCTTGTATGTGGCCATTTGCAGATATGCTGTGTTTGTGGTTTGTGGATGGTTTCATCAAATTTGGGTCACTTTTGATGTCATTATCTTTCATGCATCAACCAAGCTGTTCCAAAGCATGCTTTAAAGTATTTTAATCTTGTAATATA

mRNA sequence

CATACTCTTTTGTCTCTGACACTTTGGTTCCATAAACTCCCATCAATAATTCTCACCCAATGCTTTGACTTCATAGTTCCACCTTCTTCTTCAATCCCATCTCCCAAAATTCCTTATTTCAAAGCCTACAAGCATGCTGTTGAGAAGTTCTTCAACCCCAATTTTCAATTCTTGGCTTCACCAAACCAAATCCTCCCCTTCAGAATCGGACCAAGTCCACCAGCTTCAAAGAACCAAGTCCCTCTCATTTCACCCTCCTCCAGTGCCTTTATTGAAAGAATCGGCGAACAGAGTTACTCAGAACTTGCTCGACTCAGATTCGGCAGATCCCAGAAAGAAGATTCCGGTACCGAGGAGTTGTAAAGCTCGATCAAAAGTGAAATCCAGGGAGAATGGAGTACCAGTTCGAGACCAAGAGCTCAAACCGGCGTTGGATTCGTCTTCGTCTTCGATTCATGGAGTGTTTTCCAATTCTGGGTTGGGTTTGAAATCTCCAAATGATGAAGTTCGCGATGAGAAGAGGGATGCATGTGTTCTGCAAACGCTGGTAGTCGGCGGTGGTATGGGGAGCGACGGCGGCCGGGTCTGTGGCGGCGGAAGAGGTTCGGACGGTGGTGGTGGAGGGGATAATGGTAGGTCAGGGTTTAACAATCACCATGGAAGCAATAGCACCGATGCTTATTATCAGAAGATGATTGAAGCGAACCCAAACAACGCTCTTCTACTAGGAAATTATGCCAAGTTCTTGAAAGAGGTCCATGGAGATTTTTCCAAAGCCGAAGAGTTTTGTGGAAGGGCAATTCTGGCTGATCCGAACGATGCAAATATTCTATCGCTATATGCCGATCTGATTTGGCATACACAGAAGGATGCTCAACGAGCTGAGTCATATTTTGATCAAGCTGTTAAAAGTTCGCCAGATGATTGCTATCTCCTAGCTTCATATGCACAGTTTCTTTGGAATGCCGATGTCGATGAAGATGACAATCCAGCAGACCAGTATGAAACAGAGGAAAGCTGCCCGTCTCCGCCTGGTTTCGCTCATGGAGCTCCTCACCATTCTCCTCTGGCTGCAGCTTCATAATCTCACGAAATAGGTAGCACTCTACTTCCCACTGTAAGATAACTAAAATAAAGCATCAGCTCATTACCCTCTTTTGCTTTTAGAGTATATGTAATTTTGGCAGAATGAGTATGATTCTCTAACTGTAACCTTTCTATTACTTATCTTATGTAAAAAGTGAATAAATAAAGCTTCTCTGGCCTTTTTCCAGTATGTTGTATAGAGGAAGATTTAGTATCATCTTTCTTTCTAGCACTTGTTTTTCCCTTGTGATAAAATTACTAATCTGAAGGATTTGTCGGTAACAACTGAACGGTCGAGATTGGACGTGGGTGTACAAGCCCCCGATCCCGATCCGAGTATGAGGAACTATGTGTTTGATTAAAGAATGAAAAAGATAAAGTTGGTAGTATTTAGTACTTGATTTGGTTGGCATAGTGGAAGATTATAAGGATAGATTGGGTTGCAAATTGTAGCAAGATCTTTTTCTTGTATGTGGCCATTTGCAGATATGCTGTGTTTGTGGTTTGTGGATGGTTTCATCAAATTTGGGTCACTTTTGATGTCATTATCTTTCATGCATCAACCAAGCTGTTCCAAAGCATGCTTTAAAGTATTTTAATCTTGTAATATA

Coding sequence (CDS)

ATGCTGTTGAGAAGTTCTTCAACCCCAATTTTCAATTCTTGGCTTCACCAAACCAAATCCTCCCCTTCAGAATCGGACCAAGTCCACCAGCTTCAAAGAACCAAGTCCCTCTCATTTCACCCTCCTCCAGTGCCTTTATTGAAAGAATCGGCGAACAGAGTTACTCAGAACTTGCTCGACTCAGATTCGGCAGATCCCAGAAAGAAGATTCCGGTACCGAGGAGTTGTAAAGCTCGATCAAAAGTGAAATCCAGGGAGAATGGAGTACCAGTTCGAGACCAAGAGCTCAAACCGGCGTTGGATTCGTCTTCGTCTTCGATTCATGGAGTGTTTTCCAATTCTGGGTTGGGTTTGAAATCTCCAAATGATGAAGTTCGCGATGAGAAGAGGGATGCATGTGTTCTGCAAACGCTGGTAGTCGGCGGTGGTATGGGGAGCGACGGCGGCCGGGTCTGTGGCGGCGGAAGAGGTTCGGACGGTGGTGGTGGAGGGGATAATGGTAGGTCAGGGTTTAACAATCACCATGGAAGCAATAGCACCGATGCTTATTATCAGAAGATGATTGAAGCGAACCCAAACAACGCTCTTCTACTAGGAAATTATGCCAAGTTCTTGAAAGAGGTCCATGGAGATTTTTCCAAAGCCGAAGAGTTTTGTGGAAGGGCAATTCTGGCTGATCCGAACGATGCAAATATTCTATCGCTATATGCCGATCTGATTTGGCATACACAGAAGGATGCTCAACGAGCTGAGTCATATTTTGATCAAGCTGTTAAAAGTTCGCCAGATGATTGCTATCTCCTAGCTTCATATGCACAGTTTCTTTGGAATGCCGATGTCGATGAAGATGACAATCCAGCAGACCAGTATGAAACAGAGGAAAGCTGCCCGTCTCCGCCTGGTTTCGCTCATGGAGCTCCTCACCATTCTCCTCTGGCTGCAGCTTCATAA

Protein sequence

MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLDSDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKSPNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPPGFAHGAPHHSPLAAAS

Homology

[Close]

BLAST of Carg09584-RA vs. NCBI nr
Match: KAG7014137.1 (hypothetical protein SDJN02_24310 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 624.4 bits (1609), Expect = 5.4e-175
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD
Sbjct: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS
Sbjct: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180
           PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST
Sbjct: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180

Query: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240
           DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI
Sbjct: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240

Query: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300
           WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP
Sbjct: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300

Query: 301 GFAHGAPHHSPLAAAS 317
           GFAHGAPHHSPLAAAS
Sbjct: 301 GFAHGAPHHSPLAAAS 316

[Close]

BLAST of Carg09584-RA vs. NCBI nr
Match: XP_022953470.1 (uncharacterized protein LOC111456010 [Cucurbita moschata])

HSP 1 Score: 594.0 bits (1530), Expect = 7.8e-166
Identity = 304/316 (96.20%), Postives = 305/316 (96.52%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESAN+VTQNLLD
Sbjct: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANKVTQNLLD 60

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADPRKKIPVPRSCKARSKVKSRENGVP          DSSSSSIHGVF NSGLGLKS
Sbjct: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVP----------DSSSSSIHGVFYNSGLGLKS 120

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180
           PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST
Sbjct: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180

Query: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240
           DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI
Sbjct: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240

Query: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300
           WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP
Sbjct: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300

Query: 301 GFAHGAPHHSPLAAAS 317
           GFAHGAPHHSPLAAAS
Sbjct: 301 GFAHGAPHHSPLAAAS 306

[Close]

BLAST of Carg09584-RA vs. NCBI nr
Match: XP_022991282.1 (uncharacterized protein LOC111487984 [Cucurbita maxima] >XP_022991283.1 uncharacterized protein LOC111487984 [Cucurbita maxima])

HSP 1 Score: 589.7 bits (1519), Expect = 1.5e-164
Identity = 301/316 (95.25%), Postives = 303/316 (95.89%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQ+HQLQRTKSLSFHPPP PLLKESANRVTQNLLD
Sbjct: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQIHQLQRTKSLSFHPPPAPLLKESANRVTQNLLD 60

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADPRKKIPVPRSCKARSKVKSRENGVP          DSSSSSIHGVFSNSGLGLKS
Sbjct: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVP----------DSSSSSIHGVFSNSGLGLKS 120

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180
           PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST
Sbjct: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180

Query: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240
           DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI
Sbjct: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240

Query: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300
           WHTQKDAQRAE+YFDQAVKSSPDDCYLLASYAQFLWNADVDEDDN ADQYETEESCPSPP
Sbjct: 241 WHTQKDAQRAETYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNTADQYETEESCPSPP 300

Query: 301 GFAHGAPHHSPLAAAS 317
           GF HGAPHHSPLAAAS
Sbjct: 301 GFGHGAPHHSPLAAAS 306

[Close]

BLAST of Carg09584-RA vs. NCBI nr
Match: XP_023547706.1 (uncharacterized protein LOC111806569 [Cucurbita pepo subsp. pepo] >XP_023547707.1 uncharacterized protein LOC111806569 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.7 bits (1480), Expect = 4.9e-160
Identity = 298/317 (94.01%), Postives = 299/317 (94.32%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQ+HQLQRTKSLSFHPPP PLLKESANRVTQNLLD
Sbjct: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQIHQLQRTKSLSFHPPPAPLLKESANRVTQNLLD 60

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADP KKIPVPRSCKARSKVKSRENGVP          DSSSSSIHGVFSNSGLGLKS
Sbjct: 61  SDSADPIKKIPVPRSCKARSKVKSRENGVP----------DSSSSSIHGVFSNSGLGLKS 120

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSD-GGGGGDNGRSGFNNHHGSNS 180
           PN EVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSD GGGGGDNGRSGFNNHHGSNS
Sbjct: 121 PNYEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGGDNGRSGFNNHHGSNS 180

Query: 181 TDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADL 240
           TDAYYQKMIEANP NALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADL
Sbjct: 181 TDAYYQKMIEANPTNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADL 240

Query: 241 IWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSP 300
           IWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYET ESCPSP
Sbjct: 241 IWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETGESCPSP 300

Query: 301 PGFAHGAPHHSPLAAAS 317
           PGF HGA HHSPLAAAS
Sbjct: 301 PGFGHGATHHSPLAAAS 307

[Close]

BLAST of Carg09584-RA vs. NCBI nr
Match: KAG6575595.1 (hypothetical protein SDJN03_26234, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 567.4 bits (1461), Expect = 7.8e-158
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD
Sbjct: 77  MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 136

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS
Sbjct: 137 SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 196

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180
           PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST
Sbjct: 197 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 256

Query: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240
           DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI
Sbjct: 257 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 316

Query: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPAD 289
           WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPAD
Sbjct: 317 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPAD 364

[Close]

BLAST of Carg09584-RA vs. ExPASy TrEMBL
Match: A0A6J1GPQ2 (uncharacterized protein LOC111456010 OS=Cucurbita moschata OX=3662 GN=LOC111456010 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.8e-166
Identity = 304/316 (96.20%), Postives = 305/316 (96.52%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESAN+VTQNLLD
Sbjct: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANKVTQNLLD 60

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADPRKKIPVPRSCKARSKVKSRENGVP          DSSSSSIHGVF NSGLGLKS
Sbjct: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVP----------DSSSSSIHGVFYNSGLGLKS 120

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180
           PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST
Sbjct: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180

Query: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240
           DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI
Sbjct: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240

Query: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300
           WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP
Sbjct: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300

Query: 301 GFAHGAPHHSPLAAAS 317
           GFAHGAPHHSPLAAAS
Sbjct: 301 GFAHGAPHHSPLAAAS 306

[Close]

BLAST of Carg09584-RA vs. ExPASy TrEMBL
Match: A0A6J1JVS8 (uncharacterized protein LOC111487984 OS=Cucurbita maxima OX=3661 GN=LOC111487984 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 7.1e-165
Identity = 301/316 (95.25%), Postives = 303/316 (95.89%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLD 60
           MLLRSSSTPIFNSWLHQTKSSPSESDQ+HQLQRTKSLSFHPPP PLLKESANRVTQNLLD
Sbjct: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQIHQLQRTKSLSFHPPPAPLLKESANRVTQNLLD 60

Query: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKS 120
           SDSADPRKKIPVPRSCKARSKVKSRENGVP          DSSSSSIHGVFSNSGLGLKS
Sbjct: 61  SDSADPRKKIPVPRSCKARSKVKSRENGVP----------DSSSSSIHGVFSNSGLGLKS 120

Query: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180
           PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST
Sbjct: 121 PNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNST 180

Query: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240
           DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI
Sbjct: 181 DAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLI 240

Query: 241 WHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPP 300
           WHTQKDAQRAE+YFDQAVKSSPDDCYLLASYAQFLWNADVDEDDN ADQYETEESCPSPP
Sbjct: 241 WHTQKDAQRAETYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNTADQYETEESCPSPP 300

Query: 301 GFAHGAPHHSPLAAAS 317
           GF HGAPHHSPLAAAS
Sbjct: 301 GFGHGAPHHSPLAAAS 306

[Close]

BLAST of Carg09584-RA vs. ExPASy TrEMBL
Match: A0A5A7UU96 (Aspartate, glycine, lysine and serine-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002010 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.0e-144
Identity = 266/321 (82.87%), Postives = 289/321 (90.03%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSL----SFHPPPVPLLKESANRVTQ 60
           MLLR+SSTPI NSWLHQ+KSSPSESDQ+H LQRTKS+    SFH PP     ES NRVTQ
Sbjct: 1   MLLRTSSTPILNSWLHQSKSSPSESDQIHHLQRTKSISLTSSFHLPPPSFSNESPNRVTQ 60

Query: 61  NLLDSDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGL 120
           NLL+SDS DPRKKIP+P+S + +SKVKS+ENGV VRDQ LKP  DSSSSSIHGVF NSGL
Sbjct: 61  NLLESDSRDPRKKIPIPKSSEVQSKVKSKENGVSVRDQHLKPTSDSSSSSIHGVFLNSGL 120

Query: 121 GLKSPNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGG-GRGSDGGGGGDNGRSGFNNHH 180
           GLK PNDEV DEKRD C+LQTLVVGGGMG+DGGRVCGG GRGSDGGGGGDNGRSGFNNHH
Sbjct: 121 GLKFPNDEVCDEKRDGCILQTLVVGGGMGNDGGRVCGGSGRGSDGGGGGDNGRSGFNNHH 180

Query: 181 GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSL 240
           GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDA++LSL
Sbjct: 181 GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDASVLSL 240

Query: 241 YADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEES 300
           YADLIWHTQ+DAQRAE+YFDQAVKS+PDDCYLLASYA+FLW+ +VDE+D+  DQYETEES
Sbjct: 241 YADLIWHTQRDAQRAETYFDQAVKSAPDDCYLLASYARFLWDTEVDEEDDTEDQYETEES 300

Query: 301 CPSPPGFAHGAPHHSPLAAAS 317
             S PGF+HGAPHHSPLAA S
Sbjct: 301 HRSHPGFSHGAPHHSPLAATS 321

[Close]

BLAST of Carg09584-RA vs. ExPASy TrEMBL
Match: A0A1S3CF71 (uncharacterized protein LOC103499799 OS=Cucumis melo OX=3656 GN=LOC103499799 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.4e-143
Identity = 265/321 (82.55%), Postives = 288/321 (89.72%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSL----SFHPPPVPLLKESANRVTQ 60
           MLLR+SSTPI NSWLHQ+KSSPSESDQ+H LQRTKS+    SFH PP     ES NRVTQ
Sbjct: 1   MLLRTSSTPILNSWLHQSKSSPSESDQIHHLQRTKSISLTSSFHLPPPSFSNESPNRVTQ 60

Query: 61  NLLDSDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGL 120
           NLL+SDS DPRKKIP+P+S + +SKVK +ENGV VRDQ LKP  DSSSSSIHGVF NSGL
Sbjct: 61  NLLESDSRDPRKKIPIPKSSEVQSKVKPKENGVSVRDQHLKPTSDSSSSSIHGVFLNSGL 120

Query: 121 GLKSPNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGG-GRGSDGGGGGDNGRSGFNNHH 180
           GLK PNDEV DEKRD C+LQTLVVGGGMG+DGGRVCGG GRGSDGGGGGDNGRSGFNNHH
Sbjct: 121 GLKFPNDEVCDEKRDGCILQTLVVGGGMGNDGGRVCGGSGRGSDGGGGGDNGRSGFNNHH 180

Query: 181 GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSL 240
           GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDA++LSL
Sbjct: 181 GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDASVLSL 240

Query: 241 YADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEES 300
           YADLIWHTQ+DAQRAE+YFDQAVKS+PDDCYLLASYA+FLW+ +VDE+D+  DQYETEES
Sbjct: 241 YADLIWHTQRDAQRAETYFDQAVKSAPDDCYLLASYARFLWDTEVDEEDDTEDQYETEES 300

Query: 301 CPSPPGFAHGAPHHSPLAAAS 317
             S PGF+HGAPHHSPLAA S
Sbjct: 301 HRSHPGFSHGAPHHSPLAATS 321

[Close]

BLAST of Carg09584-RA vs. ExPASy TrEMBL
Match: A0A0A0K6Z4 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432550 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.5e-141
Identity = 264/321 (82.24%), Postives = 287/321 (89.41%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSL----SFHPPPVPLLKESANRVTQ 60
           MLLR++STPI NSWLHQ KSSPSES+Q+H LQRTKS+    SFH PP  +  ES+NRVTQ
Sbjct: 1   MLLRTNSTPILNSWLHQFKSSPSESNQIHHLQRTKSISLISSFHLPPPSVSTESSNRVTQ 60

Query: 61  NLLDSDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGL 120
           NLL+SDS DPRKKIP+ +S K   KVKSRENGV VRDQ LKP  DSSSSSIHGVF NSGL
Sbjct: 61  NLLESDSTDPRKKIPITKSSKV--KVKSRENGVSVRDQHLKPTSDSSSSSIHGVFLNSGL 120

Query: 121 GLKSPNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGG-GRGSDGGGGGDNGRSGFNNHH 180
           GLK PNDEV DEKRDAC+LQTLVVGGGMG+DGGRVCGG GRGSDGGGGGDNGRSGFNNHH
Sbjct: 121 GLKFPNDEVCDEKRDACILQTLVVGGGMGNDGGRVCGGSGRGSDGGGGGDNGRSGFNNHH 180

Query: 181 GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSL 240
           GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDA++LSL
Sbjct: 181 GSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDASVLSL 240

Query: 241 YADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEES 300
           YADLIWHTQ+DA+RAE+YFDQAVKS+PDDCYLLASYA+FLW+ DVD +D+  DQYETEES
Sbjct: 241 YADLIWHTQRDARRAETYFDQAVKSAPDDCYLLASYARFLWDTDVDNEDDTEDQYETEES 300

Query: 301 CPSPPGFAHGAPHHSPLAAAS 317
            P  PGF+HGAPHHSPLAA S
Sbjct: 301 HPLHPGFSHGAPHHSPLAATS 319

[Close]

BLAST of Carg09584-RA vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48
Identity = 140/324 (43.21%), Postives = 182/324 (56.17%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLHQTKSSPSESDQVHQL-QRTKSLSFHPPPVPLLKESANRVTQNLL 60
           MLLRS+S PI NSWL Q  S  S  +   QL +R+ SLS       +   +  ++ Q L 
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPESQLWRRSTSLSLFSSK-SIDGHTGEQLHQALS 60

Query: 61  DSDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLK 120
           D+      K      S K  +  + R + +       K    SS   +  +FS+SG G K
Sbjct: 61  DNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSSSGQGDK 120

Query: 121 -SPNDEVRDEKRDACVLQTLVV--GGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHG 180
            S ND           L+TLV   GGGMG  GG +C GG G  GG G D GRS       
Sbjct: 121 ASSNDR----------LETLVSGGGGGMGGSGGNICNGG-GGVGGSGVDGGRS------- 180

Query: 181 SNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLY 240
            ++TD YY++MI++NP N+LL GNYAKFLKEV GD  KAEE+C RAIL + ND N+LSLY
Sbjct: 181 EDATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLY 240

Query: 241 ADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYE---TE 300
           ADLI H  +D QRA SY+ QAVK SP+DCY+ ASYA+FLW+ D DE+D    + E   ++
Sbjct: 241 ADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSD 300

Query: 301 ESCPSPP-GFAHGAPHHSPLAAAS 317
           E+   PP       P H+ + A+S
Sbjct: 301 ETGHVPPTTMFRDFPQHTSITASS 305

[Close]

BLAST of Carg09584-RA vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 128/336 (38.10%), Postives = 180/336 (53.57%), Query Frame = 0


Query: 1   MLLRSSSTPIFNSWLH--QTKSSPSES-DQVHQLQRTKSLS---------FHPPPVPLLK 60
           MLLRS+STP+ NS +H    + SP E+ + VHQ+QR +S++         + P  V    
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  ESANRVTQNLLDSDSAD-PRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSI 120
           +S+ R+ +   DSD       K PV +     + ++  + G+                  
Sbjct: 61  DSSRRMKRTASDSDLRHLTSTKPPVSKFLSGGALMEDVDEGI------------------ 120

Query: 121 HGVFSNSGLGLKSPNDEVRDEKRD----ACVLQTLVVGGGMGSDGGRVCGGGRGSDGG-- 180
                  G GL      +R    D    A    T V GGG    GG   GGG+G  GG  
Sbjct: 121 -------GFGL------IRTSSYDGISWALDEDTEVAGGG---GGGMFHGGGKGRSGGRS 180

Query: 181 GGGDNGRSGFNNHHGSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGR 240
            GGD          G ++TD +Y+KMIEANP N + L NYAKFLKEV  D+ KAEE+CGR
Sbjct: 181 DGGDG---------GDDNTDVHYRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGR 240

Query: 241 AILADPNDANILSLYADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVD 300
           AIL  PND N+L++YA+L+W   KD+ RAE+YF+QAV ++P+DCY+ ASYA+FLW+A+ +
Sbjct: 241 AILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAVAAAPEDCYVQASYARFLWDAEEE 290

Query: 301 EDDNPADQYETE-ESCPSPPGFAHGAPHHSPLAAAS 317
           E++   +++E E E   S   F  G    SP+ A S
Sbjct: 301 EEEEKEERHEEELEHQTSRMNFFTGP---SPITAMS 290

[Close]

BLAST of Carg09584-RA vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 9.2e-32
Identity = 76/148 (51.35%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 145 GSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNSTDAYYQKMIEANPNNALLLGNYAKF 204
           GS+GG    GGRG DG GGG  G        G  S D YY++MI+  P + LLL NYA+F
Sbjct: 86  GSNGG---FGGRGGDGAGGGGGG--------GGGSVDGYYEEMIQRYPGDTLLLSNYARF 145

Query: 205 LKEVHGDFSKAEEFCGRAILADP-NDANILSLYADLIWHTQKDAQRAESYFDQAVKSSPD 264
           LKEV GD  KAEE+C RA+L++   D  +LS+Y DLIW    D  RA+SY+DQAV+SSPD
Sbjct: 146 LKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPD 205

Query: 265 DCYLLASYAQFLWNADVDEDDNPADQYE 292
           DC +LASYA+FLW+A+ + ++  +  +E
Sbjct: 206 DCNVLASYARFLWDAEEEVEEEESKHHE 222

[Close]

BLAST of Carg09584-RA vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29
Identity = 72/161 (44.72%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 139 VVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNSTDAYYQKMIEANPNNALLL 198
           ++ GG+  +     GGG G   G  G  G  G   +   +    YY++M+ +NPNN+LLL
Sbjct: 109 MISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYREMLRSNPNNSLLL 168

Query: 199 GNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLIWHTQKDAQRAESYFDQAV 258
            NY KFL EV  D   AEE+ GRAIL +P D   LS+Y  LIW T++D +RA+ YFDQAV
Sbjct: 169 MNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQGYFDQAV 228

Query: 259 KSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSP 300
            +SP+DC +L SYA+F+W A+ D+DD+  ++ E E    SP
Sbjct: 229 NASPNDCMVLGSYARFMWEAE-DDDDDDEEEEEEEWMAASP 268

[Close]

BLAST of Carg09584-RA vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 7.3e-21
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 183 YYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLIWH 242
           YY+ M+E  P + LLL NYAKFL E  GD S AEE+  +  + +P+D   L+ Y  L+  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 243 TQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEES 296
             +D  +A SYF++AV++SPDD  +LA+YA FLW  + D+DD   D+ + E S
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESS 235

The following BLAST results are available for this feature:

BLAST of Carg09584-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014137.1	5.4e-175	100.00	hypothetical protein SDJN02_24310 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022953470.1	7.8e-166	96.20	uncharacterized protein LOC111456010 [Cucurbita moschata]	[more]
XP_022991282.1	1.5e-164	95.25	uncharacterized protein LOC111487984 [Cucurbita maxima] >XP_022991283.1 uncharac...	[more]
XP_023547706.1	4.9e-160	94.01	uncharacterized protein LOC111806569 [Cucurbita pepo subsp. pepo] >XP_023547707....	[more]
KAG6575595.1	7.8e-158	100.00	hypothetical protein SDJN03_26234, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg09584-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg09584-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPQ2	3.8e-166	96.20	uncharacterized protein LOC111456010 OS=Cucurbita moschata OX=3662 GN=LOC1114560...	[more]
A0A6J1JVS8	7.1e-165	95.25	uncharacterized protein LOC111487984 OS=Cucurbita maxima OX=3661 GN=LOC111487984...	[more]
A0A5A7UU96	9.0e-144	82.87	Aspartate, glycine, lysine and serine-rich protein-like OS=Cucumis melo var. mak...	[more]
A0A1S3CF71	3.4e-143	82.55	uncharacterized protein LOC103499799 OS=Cucumis melo OX=3656 GN=LOC103499799 PE=...	[more]
A0A0A0K6Z4	5.5e-141	82.24	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432550 ...	[more]

BLAST of Carg09584-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80130.1	1.1e-48	43.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	1.2e-42	38.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	9.2e-32	51.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	1.1e-29	44.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	7.3e-21	44.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14559	TPR_19	coord: 182..239 e-value: 1.9E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..176
None	No IPR available	PANTHER	PTHR26312:SF168	F18B13.21 PROTEIN	coord: 1..307
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..307
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 173..292 e-value: 1.6E-15 score: 59.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 182..277

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg09584	Carg09584	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09584-RA:1	Carg09584-RA:1	exon
Carg09584-RA:2	Carg09584-RA:2	exon
Carg09584-RA:3	Carg09584-RA:3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09584-RA:five_prime_utr	Carg09584-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09584-RA:cds	Carg09584-RA:cds	CDS
Carg09584-RA:cds	Carg09584-RA:cds_2	CDS
Carg09584-RA:cds	Carg09584-RA:cds_3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09584-RA:three_prime_utr	Carg09584-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg09584-RA	Carg09584-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding