
Carg09584 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATACTCTTTTGTCTCTGACACTTTGGTTCCATAAACTCCCATCAATAATTCTCACCCAATGCTTTGACTTCATAGTTCCACCTTCTTCTTCAATCCCATCTCCCAAAATTCCTTATTTCAAAGCCTACAAGCATGCTGTTGAGAAGTTCTTCAACCCCAATTTTCAATTCTTGGCTTCACCAAACCAAATCCTCCCCTTCAGAATCGGACCAAGTCCACCAGCTTCAAAGAACCAAGTCCCTCTCATTTCACCCTCCTCCAGTGCCTTTATTGAAAGAATCGGCGAACAGAGTTACTCAGAACTTGCTCGACTCAGATTCGGCAGATCCCAGAAAGAAGATTCCGGTACCGAGGAGTTGTAAAGCTCGATCAAAAGTGAAATCCAGGGAGAATGGAGTACCAGTTCGAGACCAAGAGCTCAAACCGGCGTTGGATTCGTCTTCGTCTTCGATTCATGGAGTGTTTTCCAATTCTGGGTTGGGTTTGAAATCTCCAAATGATGAAGTTCGCGATGAGAAGAGGGATGCATGTGTTCTGCAAACGCTGGTAGTCGGCGGTGGTATGGGGAGCGACGGCGGCCGGGTCTGTGGCGGCGGAAGAGGTTCGGACGGTGGTGGTGGAGGGGATAATGGTAGGTCAGGGTTTAACAATCACCATGGAAGCAATAGCACCGATGCTTATTATCAGAAGATGATTGAAGCGAACCCAAACAACGCTCTTCTACTAGGAAATTATGCCAAGTTCTTGAAAGAGGTACTTTGGTTATCTTGTAATCTCCTGGAAAATTCTTCAATGGCTGACGCTTCTGATTATGCTCTTCAATTTAGGTCCATGGAGATTTTTCCAAAGCCGAAGAGTTTTGTGGAAGGGCAATTCTGGCTGATCCGAACGATGCAAATATTCTATCGCTATATGCCGATCTGATTTGGCATACACAGAAGGATGCTCAACGAGCTGAGTCATATTTTGATCAAGCTGTTAAAAGTTCGCCAGATGATTGGTAAGAATAGATTAAAATTTCAGCTTGAGAACTGATTGATTCTGGTTTAATTTCCTAGAAAGAGATTTTGTTGTCTGGTGATTAATTCGTTTACTTTTGATTGTTCTTGATAATAGATCAATTTGATTTCGACATGAATTCAAGAACTTGAACAGATCATAACTTCAATGTCAATCCATTTACTTAAAATTCATTGGTTGTGAACATTCCAATCTGATTCTGGCTTGTATCTTTTCTTCAAGATTTGAGAAATTGATCTTCGTTACCATGTGGTGTAGTCTAGTTGTCATCAATTTAAATCAATTACATTTTATAATCAGAATCTCCCAGTTAAACTTTGAAAAGGATAGAGTATTTCATAAGTCTTTGTTTCTCTGTTTATGATATTGTTTCAATTCAAAGTTAATTTGGTTGTCACAAAATCTTCTTCTCTGTCTACAGCTATCTCCTAGCTTCATATGCACAGTTTCTTTGGAATGCCGATGTCGATGAAGATGACAATCCAGCAGACCAGTATGAAACAGAGGAAAGCTGCCCGTCTCCGCCTGGTTTCGCTCATGGAGCTCCTCACCATTCTCCTCTGGCTGCAGCTTCATAATCTCACGAAATAGGTAGCACTCTACTTCCCACTGTAAGATAACTAAAATAAAGCATCAGCTCATTACCCTCTTTTGCTTTTAGAGTATATGTAATTTTGGCAGAATGAGTATGATTCTCTAACTGTAACCTTTCTATTACTTATCTTATGTAAAAAGTGAATAAATAAAGCTTCTCTGGCCTTTTTCCAGTATGTTGTATAGAGGAAGATTTAGTATCATCTTTCTTTCTAGCACTTGTTTTTCCCTTGTGATAAAATTACTAATCTGAAGGATTTGTCGGTAACAACTGAACGGTCGAGATTGGACGTGGGTGTACAAGCCCCCGATCCCGATCCGAGTATGAGGAACTATGTGTTTGATTAAAGAATGAAAAAGATAAAGTTGGTAGTATTTAGTACTTGATTTGGTTGGCATAGTGGAAGATTATAAGGATAGATTGGGTTGCAAATTGTAGCAAGATCTTTTTCTTGTATGTGGCCATTTGCAGATATGCTGTGTTTGTGGTTTGTGGATGGTTTCATCAAATTTGGGTCACTTTTGATGTCATTATCTTTCATGCATCAACCAAGCTGTTCCAAAGCATGCTTTAAAGTATTTTAATCTTGTAATATA CATACTCTTTTGTCTCTGACACTTTGGTTCCATAAACTCCCATCAATAATTCTCACCCAATGCTTTGACTTCATAGTTCCACCTTCTTCTTCAATCCCATCTCCCAAAATTCCTTATTTCAAAGCCTACAAGCATGCTGTTGAGAAGTTCTTCAACCCCAATTTTCAATTCTTGGCTTCACCAAACCAAATCCTCCCCTTCAGAATCGGACCAAGTCCACCAGCTTCAAAGAACCAAGTCCCTCTCATTTCACCCTCCTCCAGTGCCTTTATTGAAAGAATCGGCGAACAGAGTTACTCAGAACTTGCTCGACTCAGATTCGGCAGATCCCAGAAAGAAGATTCCGGTACCGAGGAGTTGTAAAGCTCGATCAAAAGTGAAATCCAGGGAGAATGGAGTACCAGTTCGAGACCAAGAGCTCAAACCGGCGTTGGATTCGTCTTCGTCTTCGATTCATGGAGTGTTTTCCAATTCTGGGTTGGGTTTGAAATCTCCAAATGATGAAGTTCGCGATGAGAAGAGGGATGCATGTGTTCTGCAAACGCTGGTAGTCGGCGGTGGTATGGGGAGCGACGGCGGCCGGGTCTGTGGCGGCGGAAGAGGTTCGGACGGTGGTGGTGGAGGGGATAATGGTAGGTCAGGGTTTAACAATCACCATGGAAGCAATAGCACCGATGCTTATTATCAGAAGATGATTGAAGCGAACCCAAACAACGCTCTTCTACTAGGAAATTATGCCAAGTTCTTGAAAGAGGTCCATGGAGATTTTTCCAAAGCCGAAGAGTTTTGTGGAAGGGCAATTCTGGCTGATCCGAACGATGCAAATATTCTATCGCTATATGCCGATCTGATTTGGCATACACAGAAGGATGCTCAACGAGCTGAGTCATATTTTGATCAAGCTGTTAAAAGTTCGCCAGATGATTGCTATCTCCTAGCTTCATATGCACAGTTTCTTTGGAATGCCGATGTCGATGAAGATGACAATCCAGCAGACCAGTATGAAACAGAGGAAAGCTGCCCGTCTCCGCCTGGTTTCGCTCATGGAGCTCCTCACCATTCTCCTCTGGCTGCAGCTTCATAATCTCACGAAATAGGTAGCACTCTACTTCCCACTGTAAGATAACTAAAATAAAGCATCAGCTCATTACCCTCTTTTGCTTTTAGAGTATATGTAATTTTGGCAGAATGAGTATGATTCTCTAACTGTAACCTTTCTATTACTTATCTTATGTAAAAAGTGAATAAATAAAGCTTCTCTGGCCTTTTTCCAGTATGTTGTATAGAGGAAGATTTAGTATCATCTTTCTTTCTAGCACTTGTTTTTCCCTTGTGATAAAATTACTAATCTGAAGGATTTGTCGGTAACAACTGAACGGTCGAGATTGGACGTGGGTGTACAAGCCCCCGATCCCGATCCGAGTATGAGGAACTATGTGTTTGATTAAAGAATGAAAAAGATAAAGTTGGTAGTATTTAGTACTTGATTTGGTTGGCATAGTGGAAGATTATAAGGATAGATTGGGTTGCAAATTGTAGCAAGATCTTTTTCTTGTATGTGGCCATTTGCAGATATGCTGTGTTTGTGGTTTGTGGATGGTTTCATCAAATTTGGGTCACTTTTGATGTCATTATCTTTCATGCATCAACCAAGCTGTTCCAAAGCATGCTTTAAAGTATTTTAATCTTGTAATATA ATGCTGTTGAGAAGTTCTTCAACCCCAATTTTCAATTCTTGGCTTCACCAAACCAAATCCTCCCCTTCAGAATCGGACCAAGTCCACCAGCTTCAAAGAACCAAGTCCCTCTCATTTCACCCTCCTCCAGTGCCTTTATTGAAAGAATCGGCGAACAGAGTTACTCAGAACTTGCTCGACTCAGATTCGGCAGATCCCAGAAAGAAGATTCCGGTACCGAGGAGTTGTAAAGCTCGATCAAAAGTGAAATCCAGGGAGAATGGAGTACCAGTTCGAGACCAAGAGCTCAAACCGGCGTTGGATTCGTCTTCGTCTTCGATTCATGGAGTGTTTTCCAATTCTGGGTTGGGTTTGAAATCTCCAAATGATGAAGTTCGCGATGAGAAGAGGGATGCATGTGTTCTGCAAACGCTGGTAGTCGGCGGTGGTATGGGGAGCGACGGCGGCCGGGTCTGTGGCGGCGGAAGAGGTTCGGACGGTGGTGGTGGAGGGGATAATGGTAGGTCAGGGTTTAACAATCACCATGGAAGCAATAGCACCGATGCTTATTATCAGAAGATGATTGAAGCGAACCCAAACAACGCTCTTCTACTAGGAAATTATGCCAAGTTCTTGAAAGAGGTCCATGGAGATTTTTCCAAAGCCGAAGAGTTTTGTGGAAGGGCAATTCTGGCTGATCCGAACGATGCAAATATTCTATCGCTATATGCCGATCTGATTTGGCATACACAGAAGGATGCTCAACGAGCTGAGTCATATTTTGATCAAGCTGTTAAAAGTTCGCCAGATGATTGCTATCTCCTAGCTTCATATGCACAGTTTCTTTGGAATGCCGATGTCGATGAAGATGACAATCCAGCAGACCAGTATGAAACAGAGGAAAGCTGCCCGTCTCCGCCTGGTTTCGCTCATGGAGCTCCTCACCATTCTCCTCTGGCTGCAGCTTCATAA MLLRSSSTPIFNSWLHQTKSSPSESDQVHQLQRTKSLSFHPPPVPLLKESANRVTQNLLDSDSADPRKKIPVPRSCKARSKVKSRENGVPVRDQELKPALDSSSSSIHGVFSNSGLGLKSPNDEVRDEKRDACVLQTLVVGGGMGSDGGRVCGGGRGSDGGGGGDNGRSGFNNHHGSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDANILSLYADLIWHTQKDAQRAESYFDQAVKSSPDDCYLLASYAQFLWNADVDEDDNPADQYETEESCPSPPGFAHGAPHHSPLAAAS Homology
BLAST of Carg09584 vs. NCBI nr
Match: KAG7014137.1 (hypothetical protein SDJN02_24310 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 624.4 bits (1609), Expect = 5.4e-175 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
BLAST of Carg09584 vs. NCBI nr
Match: XP_022953470.1 (uncharacterized protein LOC111456010 [Cucurbita moschata]) HSP 1 Score: 594.0 bits (1530), Expect = 7.8e-166 Identity = 304/316 (96.20%), Postives = 305/316 (96.52%), Query Frame = 0
BLAST of Carg09584 vs. NCBI nr
Match: XP_022991282.1 (uncharacterized protein LOC111487984 [Cucurbita maxima] >XP_022991283.1 uncharacterized protein LOC111487984 [Cucurbita maxima]) HSP 1 Score: 589.7 bits (1519), Expect = 1.5e-164 Identity = 301/316 (95.25%), Postives = 303/316 (95.89%), Query Frame = 0
BLAST of Carg09584 vs. NCBI nr
Match: XP_023547706.1 (uncharacterized protein LOC111806569 [Cucurbita pepo subsp. pepo] >XP_023547707.1 uncharacterized protein LOC111806569 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 574.7 bits (1480), Expect = 4.9e-160 Identity = 298/317 (94.01%), Postives = 299/317 (94.32%), Query Frame = 0
BLAST of Carg09584 vs. NCBI nr
Match: KAG6575595.1 (hypothetical protein SDJN03_26234, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 567.4 bits (1461), Expect = 7.8e-158 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of Carg09584 vs. ExPASy TrEMBL
Match: A0A6J1GPQ2 (uncharacterized protein LOC111456010 OS=Cucurbita moschata OX=3662 GN=LOC111456010 PE=4 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 3.8e-166 Identity = 304/316 (96.20%), Postives = 305/316 (96.52%), Query Frame = 0
BLAST of Carg09584 vs. ExPASy TrEMBL
Match: A0A6J1JVS8 (uncharacterized protein LOC111487984 OS=Cucurbita maxima OX=3661 GN=LOC111487984 PE=4 SV=1) HSP 1 Score: 589.7 bits (1519), Expect = 7.1e-165 Identity = 301/316 (95.25%), Postives = 303/316 (95.89%), Query Frame = 0
BLAST of Carg09584 vs. ExPASy TrEMBL
Match: A0A5A7UU96 (Aspartate, glycine, lysine and serine-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002010 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 9.0e-144 Identity = 266/321 (82.87%), Postives = 289/321 (90.03%), Query Frame = 0
BLAST of Carg09584 vs. ExPASy TrEMBL
Match: A0A1S3CF71 (uncharacterized protein LOC103499799 OS=Cucumis melo OX=3656 GN=LOC103499799 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 3.4e-143 Identity = 265/321 (82.55%), Postives = 288/321 (89.72%), Query Frame = 0
BLAST of Carg09584 vs. ExPASy TrEMBL
Match: A0A0A0K6Z4 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432550 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 5.5e-141 Identity = 264/321 (82.24%), Postives = 287/321 (89.41%), Query Frame = 0
BLAST of Carg09584 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48 Identity = 140/324 (43.21%), Postives = 182/324 (56.17%), Query Frame = 0
BLAST of Carg09584 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42 Identity = 128/336 (38.10%), Postives = 180/336 (53.57%), Query Frame = 0
BLAST of Carg09584 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 135.2 bits (339), Expect = 9.2e-32 Identity = 76/148 (51.35%), Postives = 100/148 (67.57%), Query Frame = 0
BLAST of Carg09584 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29 Identity = 72/161 (44.72%), Postives = 100/161 (62.11%), Query Frame = 0
BLAST of Carg09584 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 99.0 bits (245), Expect = 7.3e-21 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|