Carg06313-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGAGCCTACGTCATAATTTGTGGCAGCGGGGGCCTGCGTTCGCGCGGCCCCTTCCCAATATAAAGTCCAATTGCTTCACAAATTTTACTACCTCGTACGTTGATGCTCGAAGGCTGGATTGTTTGAGATTTGCTTCGGCGCCGCCGCCACTTCTCCGGTAAGTGCAACGACGGCGGCTACGAAGTCTATTAAATGCGCGACTGTTGAAGATGCCTTGCCTTCTCATTTCGACGGTATGATTCATCCTCAGGATTTTTCATTTTAGCTCGTTTTCTAGCTTATCCGCAATTGCAATGTAGTTTCTCTCATTCTCTATTTGATTTTTTTCTCTAGATTTTTGCCATTTTCGCCTGTTTTCTCGGCGTTTTTTAGTTCATCTGAAATTTCGCTTTTGTTTCTTTCTAAGAAAAGAGAATTCTCGGTTTGATTATGATGTGTTTTGTATTGGCAGGATTATGTTCCGACTGTTCTTGGCAATTTCAGCGCCGATGTTTTGGTTAATCGGCAGTTCTTAATCAGAGCTTCAAGGACACTGCTGGTGATTTCCATTTCCTCTGCTTCTGATTATCATGCTTCATTTATTCTGTTTTGTTATTAAAATTGTAGCGATTTTCTTTTCTGAGATTTCTATCTGTTCATCTGTTTAAGCTTAAACCCTAATCGACTCAAATCGCCGCTTCCAATGAAGTATGAAAACCTTTAAGTCTTGCAAGTGGAGTGACGATTTAGGAGACTTTAGCGAATTACAAGACAAATGAAGTCTTTATGATCACAGGATCGAATCGAAACCAAACACAAACTATAATCACCATCGGATTGTAGATTATCACCCGAGTTTTCTTGTCGTAGATTTTATTTTTGTTTTATCAACAGGTATAGGATTTGGATATCTGAAAAGGTTATATATCAAGTACTTACAGGAAATGGAGATGGACTTTTAAGTTGAAACTATATTTCAAAAGGTTTCTTCTCAGAATGTGTTCCAAATCTTTCCGGTTTGTAAGCTACTCCATAGATCGTTTCGTTATTGTTCTTCACTTGTTTCTTTTGTCATTGACAATAATCAGTTTATCCTTATAGTTGGAAGGGAAATCCAGTGGAAAAGTAAAGAGCAAGAGTTCTTTTTCTAAAGGCACTCCATGACATTGTTGTAACAGCTCAAGTTCACCGCTAGCAGATATTATCCTCTTTGGATTTTTCCTTTCGGGTTTCCTCTCAAAGTTTTTATAATGCGTTTGTTAGGGAGAGGTTTCCACACCCTTATACAAAAATGCTTCGCTCTCCTTCCCAACTGATGTGAGATCTTATAATCCACCCCCCTCTTCAGGGCGGCCCAACGTCTTCACTGGTACTCATTCCTCTCTCCAATCAATGTGAGATCTCACAATTGTCTTTTAGAAATATGTGAATGATGGAAAGCTTGATAGACAATCTTAACTTGCAAACTGAGTATAGCTCAATTGGTTCAATGCGTATATCCTTGATTAGGAGGTCAAAAGTGCGAATTTCCCCATTCCCATAAGTTGTTCAACTAAAAAAAGAGAAGTCAACCATAACTACAAAGCCACTAGATCAATGGTTCCTCTTAAGATCCACAATCATCGAGATTGGAGAAAGATTTTAAACTGAAGCCTCCAAACAAGCCATCACCTGAATAAGAATGCACGCAATCCAAACTTGGGGACACTATGCAAGGAGTGTTAGCAATGGCCCCTTGCATTGGTGTCTCTACAATCTTGCTTGGATCAAACTTTAGTCTTTGGTCCACTTTAAATTGGGTACTCCAATCTTTAAGAAGACGATATTGCCACTGTATCAAGTTAAGATAATTTCAACTGTTCAACTAATATGATACCAAAGTGCTGTGTCAATGTTAAAAGGATCGTTTTACTGGTTAAGAAGATTATAACAGCAAAGACCTTTGAGGGCCACCTCCTTGCCTACTCGTTTCTCTATATGTCTATTGTTCTGTAATTTCTAGGGGAAGGTTATTCTTGAAGCTCCTACTCGTCCCCCACCTGCCCCTACTCTTGTTCCTCAATGTTCTTTGCATTGTGTGATAGTGTTCTGATTGGCAGTCCTATCCTGTTGCTTGGGATGGCCGATCTGATAGACGGCGAACAATTCCTCTTGGACTATCCTGGGGCAGAGCCTACGTCATAATTTGTGGCAGCGGGGGCCTGCGTTCGCGCGGCCCCTTCCCAATATAAAGTCCAATTGCTTCACAAATTTTACTACCTCGTACGTTGATGCTCGAAGGCTGGATTGTTTGAGATTTGCTTCGGCGCCGCCGCCACTTCTCCGGTAAGTGCAACGACGGCGGCTACGAAGTCTATTAAATGCGCGACTGTTGAAGATGCCTTGCCTTCTCATTTCGACGGATTATGTTCCGACTGTTCTTGGCAATTTCAGCGCCGATGTTTTGGTTAATCGGCAGTTCTTAATCAGAGCTTCAAGGACACTGCTGTGTTCTGATTGGCAGTCCTATCCTGTTGCTTGGGATGGCCGATCTGATAGACGGCGAACAATTCCTCTTGGACTATCCTGG ATGCCTTGCCTTCTCATTTCGACGGATTATGTTCCGACTGTTCTTGGCAATTTCAGCGCCGATGTTTTGGTTAATCGGCAGTTCTTAATCAGAGCTTCAAGGACACTGCTGTGTTCTGATTGGCAGTCCTATCCTGTTGCTTGGGATGGCCGATCTGATAGACGGCGAACAATTCCTCTTGGACTATCCTGG MPCLLISTDYVPTVLGNFSADVLVNRQFLIRASRTLLCSDWQSYPVAWDGRSDRRRTIPLGLSW Homology
BLAST of Carg06313-RA vs. NCBI nr
Match: KAG7028737.1 (hypothetical protein SDJN02_09918, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.4 bits (350), Expect = 1.1e-29 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Carg06313-RA vs. NCBI nr
Match: KAG6597265.1 (hypothetical protein SDJN03_10445, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.7 bits (182), Expect = 3.2e-10 Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Carg06313-RA vs. NCBI nr
Match: XP_022957090.1 (uncharacterized protein LOC111458545 [Cucurbita moschata]) HSP 1 Score: 68.9 bits (167), Expect = 1.8e-08 Identity = 37/44 (84.09%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of Carg06313-RA vs. NCBI nr
Match: XP_022974770.1 (uncharacterized protein LOC111473496 [Cucurbita maxima]) HSP 1 Score: 54.3 bits (129), Expect = 4.5e-04 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of Carg06313-RA vs. ExPASy TrEMBL
Match: A0A6J1GZJ6 (uncharacterized protein LOC111458545 OS=Cucurbita moschata OX=3662 GN=LOC111458545 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 8.5e-09 Identity = 37/44 (84.09%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of Carg06313-RA vs. ExPASy TrEMBL
Match: A0A6J1IET5 (uncharacterized protein LOC111473496 OS=Cucurbita maxima OX=3661 GN=LOC111473496 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.2e-04 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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