Carg05097-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2
|
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGTCGTCTCGCAGTTCCATTAGACATGACGACGGCGGAGGGATTCAGCTGGGAAATTTTGTCGGCAAGAATTTGACGCGCAAGAGAAGAAGGATTGCGGCAGATCTTTGGCGGTTTTGTTACAGAGCCGTATGTCCAGAATTGACGAGAGGGAAGCCGAAATTGTTAAAGCTGATTATTTATACCACAAAAATGCGCCAACGGGATTATTTATTTATTTATTTTTAGTTTCATTAAATTGGAGTTGAAATGGGAAATTTTTGGGATTGTTTTTAATATTATTATTTTCATAAAATATTTCTACAAATTTCATTCATTAATTTTTTCTTTTATTTTCCGACTTTAAAAAAATGTTTAATAAATTTACTAAATATTTTTATTTTATATTCCATTTAATGTTTTATTTTAATATTTAGTTCGTGTAAATATATAATAGTTCAAACCCACCGCTAATTGATATTATTCATAATTTTAATATACGTATGTTACGAGAGGTTTCAACACTTTTATAAGGAATGTTTGGTTCCCCTCTCGTGACATTTTTGTCCACCTTACAGATAAACGTGCCTCCAATAATTTGTATATTTCTAGACAAGATGCACTGACATGAATCCCGACCTATGTAAGTTCCTATTTACCCTAAAAAAATTTCATAGTCACAACATTGTTACAATTTTGCCCTTTATACAGACACCGACTTGCCTAAGCATATAGGGGTCTTTTTATCTCTAAAACTCTGAGTTAAAAATATTTTAATTTTTCTTAGGGTTTTCGCATATTCTTACCATCTTGGTTCCCGGGCATATAAAAAATCACTTTGGTGGGTCAAATAGGAGATGAAAAGTAAGAGTTTTACACCAGAAAGTTTACTGTAAGCCAAATCTCGAGAAATTGAACAACATAGAAAAACAATGGAGAGAGAATCGATCAATTGATAGACAACTGGACAAACAACTCGACGAGTTATCAAACCCTAAAACGTAAATCACTGTTCCTCCTCGAATAATGTTATATATATATATACACATACATACATGATTTTTACCCGTGTCTAATCATTTGTCTATGATATAAATGAACACTTCATACACGAAAAAAACATAGATCGTTTTTAAATTTATTTAGAATTAGACGAAAGTAAAAGGGTAAAATAGTCAATACCTCTTTTCATAATATATTATTTTGGTAATATACTTATTGAAAAATATTCTCTTTACTTCAAAAATAGTATTTTAGTTTCATATTATTAAAAAATTTAAAAAAAAATGCTCTTTTTTTAAATATGCATTAGAAATTTCTTTAAATATTATTTATTAAAAAAAAACCACAATAATTTCATATTCTCAAAATATTATTTTGGATTTTTATTATTGACTTTTTAAATATTAATTATTATTATTTAAAAATATTATTCTATTTTTTAATAAAATAAAAGGAGAAATCGGAAGTTTCTGTGTCGACACAATTCTCTGGAACAATCGACCGTTTTATTTCCCCCGTAAACTTGCTTTTTCTGACAGATCCACAAACCCTAGCTCCGGCATCTCCTTCGAGTTCTTCGGCATCTTCAAACTCAATGGCGCCTGCAAACTAAATGAAGAAGTCGTCTCGCAGTTCCATTAGACATGACGACGGCGGAGGGATTCAGCTGGGAAATTTTGTCGGCAAGAATTTGACGCGCAAGAGAAGAAGGATTGCGGCAGATCTTTGGCGGTTTTGTTACAGAGCCGAGAAATCGGAAGTTTCTGTGTCGACACAATTCTCTGGAACAATCGACCGTTTTATTTCCCCCGTAAACTTGCTTTTTCTGACAGATCCACAAACCCTAGCTCCGGCATCTCCTTCGAGTTCTTCGGCATCTTCAAACTCAATGGCGCCTGCAAACTAA ATGAAGAAGTCGTCTCGCAGTTCCATTAGACATGACGACGGCGGAGGGATTCAGCTGGGAAATTTTGTCGGCAAGAATTTGACGCGCAAGAGAAGAAGGATTGCGGCAGATCTTTGGCGGTTTTGTTACAGAGCCGAGAAATCGGAAGTTTCTGTGTCGACACAATTCTCTGGAACAATCGACCGTTTTATTTCCCCCGTAAACTTGCTTTTTCTGACAGATCCACAAACCCTAGCTCCGGCATCTCCTTCGAGTTCTTCGGCATCTTCAAACTCAATGGCGCCTGCAAACTAA MKKSSRSSIRHDDGGGIQLGNFVGKNLTRKRRRIAADLWRFCYRAEKSEVSVSTQFSGTIDRFISPVNLLFLTDPQTLAPASPSSSSASSNSMAPAN Homology
BLAST of Carg05097-RA vs. NCBI nr
Match: KAG7025465.1 (hypothetical protein SDJN02_11960, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.0 bits (476), Expect = 3.9e-44 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Carg05097-RA vs. NCBI nr
Match: KAG6593057.1 (Lysine-specific demethylase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.0 bits (245), Expect = 2.4e-17 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|