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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAGGCCTTAAAATGACAATAAATCTTCAATTGATTATATTTTTAATTTTGGATGGGCTCTCCACTGATCATCTGAAGAGCGAGAGCAAGAAGGCCGCCATTGACAGACCAAACACCGACCAAATTATCCAGCACAAACTCCCCGGAAGGAAGGAGATCGCCATTAGGTAGAACATCATCGAGGTTAGTACTGAACCGAATTTCTCGAGATTGTTTCCGAATCTCGGAAAGGAATCCCGAAGATTAACGCCACAAAACGAGACGCCATAGTTTATCACCATTATTACCTTCGCGATTTGTAGGAATTGAGAAGGCGGAATCTGTGGAGAGACGAGCAATCCTAACGGTTCGCCCTTGGAATTGGATAGCTCTGGAATTCATTAACCACGTACAATGGAAGTGTGCGATGTTGCAGTGCGTCGAATCTCCTTCGATTGAGCGCCATTGCGTGA mRNA sequence ATGGAAGGCCTTAAAATGACAATAAATCTTCAATTGATTATATTTTTAATTTTGGATGGGCTCTCCACTGATCATCTGAAGAGCGAGAGCAAGAAGGCCGCCATTGACAGACCAAACACCGACCAAATTATCCAGCACAAACTCCCCGGAAGGAAGGAGATCGCCATTAGTGCGTCGAATCTCCTTCGATTGAGCGCCATTGCGTGA Coding sequence (CDS) ATGGAAGGCCTTAAAATGACAATAAATCTTCAATTGATTATATTTTTAATTTTGGATGGGCTCTCCACTGATCATCTGAAGAGCGAGAGCAAGAAGGCCGCCATTGACAGACCAAACACCGACCAAATTATCCAGCACAAACTCCCCGGAAGGAAGGAGATCGCCATTAGTGCGTCGAATCTCCTTCGATTGAGCGCCATTGCGTGA Protein sequence MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAISASNLLRLSAIA
Homology
BLAST of Carg01780-RA vs. NCBI nr
Match: KAG7032138.1 (hypothetical protein SDJN02_06181, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
Query: 1 MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAISASN 60
MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAISASN
Sbjct: 1 MEGLKMTINLQLIIFLILDGLSTDHLKSESKKAAIDRPNTDQIIQHKLPGRKEIAISASN 60
Query: 61 LLRLSAIA 69
LLRLSAIA
Sbjct: 61 LLRLSAIA 68
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7032138.1 | 1.2e-26 | 100.00 | hypothetical protein SDJN02_06181, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Carg01780 | Carg01780 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg01780-RA:2 | Carg01780-RA:2 | exon |
| Carg01780-RA:1 | Carg01780-RA:1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg01780-RA:cds | Carg01780-RA:cds_2 | CDS |
| Carg01780-RA:cds | Carg01780-RA:cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg01780-RA | Carg01780-RA-protein | polypeptide |
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