|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTATAGTCGATACATCATTAATGCAAAAGCTTCTCCTTTTTCGACCATTGACTCTAGGTATATTCACTGATTGGTGGTAATGCCTGGTTCATTCCTTTTTTTTTTTCTAATGCATTTTCTTTGTCTGTGGTAATGCTGACTGCATTTCTCTTAAGATGTGTGACATAGCAGACAGCAAATGTTATATTCAAATTTGAAGAACGAATCAGAAAGAATTTCATTCCAACATCTGAAAAGTGTAAGTTAAAAATCTGTAACGAAACCAGTATCATATCCATGGAGTAAAAAATTAATCGATGAACATTCTTTATGTAGCAAAAAACAAAAAATTCAATTGCTTGCTGTATGATTACTGTGTACAGGTCCCTAAGCTGCAGGTTGCCAAGAGTTGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCAGTCCAGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCCTGCCAGTCAACAACATAGGTAG mRNA sequence ATGTATAGTCGATACATCATTAATGCAAAAGCTTCTCCTTTTTCGACCATTGACTCTAGGTCCCTAAGCTGCAGGTTGCCAAGAGTTGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCAGTCCAGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCCTGCCAGTCAACAACATAGGTAG Coding sequence (CDS) ATGTATAGTCGATACATCATTAATGCAAAAGCTTCTCCTTTTTCGACCATTGACTCTAGGTCCCTAAGCTGCAGGTTGCCAAGAGTTGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCAGTCCAGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCCTGCCAGTCAACAACATAGGTAG Protein sequence MYSRYIINAKASPFSTIDSRSLSCRLPRVVNQKLFPTVGILSKDQRTKSGQSLAVQCPKLHRTVTSNWVVRLPLSQAQVLYPSTLHSVPPASQQHR
Homology
BLAST of Carg01752-RA vs. NCBI nr
Match: KAG7032166.1 (hypothetical protein SDJN02_06209, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.4 bits (490), Expect = 9.3e-46 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
Query: 1 MYSRYIINAKASPFSTIDSRSLSCRLPRVVNQKLFPTVGILSKDQRTKSGQSLAVQCPKL 60
MYSRYIINAKASPFSTIDSRSLSCRLPRVVNQKLFPTVGILSKDQRTKSGQSLAVQCPKL
Sbjct: 1 MYSRYIINAKASPFSTIDSRSLSCRLPRVVNQKLFPTVGILSKDQRTKSGQSLAVQCPKL 60
Query: 61 HRTVTSNWVVRLPLSQAQVLYPSTLHSVPPASQQHR 97
HRTVTSNWVVRLPLSQAQVLYPSTLHSVPPASQQHR
Sbjct: 61 HRTVTSNWVVRLPLSQAQVLYPSTLHSVPPASQQHR 96
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7032166.1 | 9.3e-46 | 100.00 | hypothetical protein SDJN02_06209, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Carg01752 | Carg01752 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg01752-RA:2 | Carg01752-RA:2 | exon |
| Carg01752-RA:1 | Carg01752-RA:1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg01752-RA:cds | Carg01752-RA:cds_2 | CDS |
| Carg01752-RA:cds | Carg01752-RA:cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg01752-RA | Carg01752-RA-protein | polypeptide |
|
