CaUC10G183000.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G183000.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ethylene-responsive transcription factor ERF026-like
Location	Ciama_Chr10: 4713214 .. 4713726 (-)
Sequence length	513
RNA-Seq Expression	CaUC10G183000.1
Synteny	CaUC10G183000.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCACAGCTTTCACCACCAGTCTCTTCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

mRNA sequence

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCACAGCTTTCACCACCAGTCTCTTCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Coding sequence (CDS)

ATGGCCTCCACCACCTCCTCCAACAGACATGATCACTACAAAGGAATCCGCTGCCGGAGCGGCAAATGGGTGTCCGAGATTCGTGAGCCACGTAAGACTACCCGAATATGGCTCGGTACCTACCCTACGCCGGAGATGGCTGCTGCTGCCTACGATGTCGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCGGAATTGATTGCCTCCTACCCGGTTCCGGCTTCCTCGTCCCCAGCCGATATCCGATTTTCTGCCGCTGCTGCTGCCGCCTTGAAAAAAGTTGATGATCAAGGACAAAACACTGACCACAGCTTTCACCACCAGTCTCTTCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTTGTTGACATGGCCGAGGGAATGCTGTTGTCCCCACCACGAATGACCTCGTCGCCGTCCCGACATGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGCTACCACTAG

Protein sequence

MASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH

Homology

[Close]

BLAST of CaUC10G183000.1 vs. NCBI nr
Match: XP_008448976.1 (PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo] >TYK09833.1 ethylene-responsive transcription factor ERF026-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 7.3e-78
Identity = 144/168 (85.71%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ +ASYPVPAS+SP DIR +AAAAAA K+VDDQG+N  H+ H+QS P NEFVDE
Sbjct: 62  AVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLL+DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 122 EALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]

BLAST of CaUC10G183000.1 vs. NCBI nr
Match: XP_031737859.1 (ethylene-responsive transcription factor ERF026-like [Cucumis sativus] >KAE8650091.1 hypothetical protein Csa_011655 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 145/168 (86.31%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP  +A YPVPAS+SP DIR +AAAAAA KKVDDQG+N+ H+ H+QS PTNEFVDE
Sbjct: 62  AVLNFPNSVAFYPVPASTSPNDIRIAAAAAAASKKVDDQGENSYHNSHYQSPPTNEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLL DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 122 EALFGMPNLLHDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]

BLAST of CaUC10G183000.1 vs. NCBI nr
Match: XP_038905599.1 (ethylene-responsive transcription factor ERF026-like [Benincasa hispida])

HSP 1 Score: 298.9 bits (764), Expect = 2.8e-77
Identity = 145/167 (86.83%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHD YKGIRCRS KWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDQYKGIRCRSSKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ I SYPVPAS+SPADIR +AAAAAAL+KVDDQG++  HS H+Q  PTNEFVDE
Sbjct: 62  AVLNFPDSIGSYPVPASTSPADIRIAAAAAAALRKVDDQGESNYHSSHYQCPPTNEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           EALFGMPNLLVDMAEGMLLSPPR++SSPSRHDYYSWNSSGDGNLWSY
Sbjct: 122 EALFGMPNLLVDMAEGMLLSPPRISSSPSRHDYYSWNSSGDGNLWSY 168

[Close]

BLAST of CaUC10G183000.1 vs. NCBI nr
Match: KAG7028324.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.6 bits (719), Expect = 4.6e-72
Identity = 138/168 (82.14%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSSN+H HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ I SYPVP S SPADIR +AA AAA  K  D G+ + ++ HHQS PT+EFVDE
Sbjct: 62  AVLNFPDSIGSYPVPTSMSPADIRVAAATAAAASKRIDHGEGS-YNNHHQSPPTDEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLLVDMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 122 EALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 168

[Close]

BLAST of CaUC10G183000.1 vs. NCBI nr
Match: XP_023540856.1 (ethylene-responsive transcription factor ERF026-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 3.3e-70
Identity = 136/168 (80.95%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSSN+H HYKGIRCRSGKWVSEIREPRKTTRIWLGTYP+PEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPSPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ I SYPVP S SPADIR +AA AAA  K  D  + + +S HHQS P +EFVDE
Sbjct: 62  AVLNFPDSIGSYPVPTSMSPADIRVAAATAAAASKRIDHEEGSYNS-HHQSPPPDEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLLVDMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 122 EALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 168

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy Swiss-Prot
Match: Q9FJ90 (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-42
Identity = 101/181 (55.80%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQN--------------TDHS 122
           AVLNFP L  +Y  P S+S ADIR +A+ AA +K+ D  G                 + S
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 123 FHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWS 170
            +  SL   EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWS
Sbjct: 175 CNSCSL---EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWS 231

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.3e-42
Identity = 101/177 (57.06%), Postives = 121/177 (68.36%), Query Frame = 0


Query: 1   MASTTSSNRHDH---YKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALA 60
           MA+ T  +R      Y+GIRCRSGKWVSEIREP+KTTR+WLGTYPTPEMAAAAYDVAALA
Sbjct: 75  MATDTDISRRKKNPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALA 134

Query: 61  LKGCNAVLNFPELIASYPVPASSSPADIRFSAAAAAALK-----KVDDQGQNTDHSFHHQ 120
           LKG + +LNFP+ + SYP+P SSS A IR +AAAAAA +      V    +  D  +   
Sbjct: 135 LKGGDTLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKKEDKVYDTA 194

Query: 121 SLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
              T  FVDEE L  MP LL DMA+GM+++PP M S PS  D    NS G+ +LWSY
Sbjct: 195 ESSTMGFVDEEELLNMPGLLADMAKGMMVAPPWMGSPPS--DDSPENSDGE-SLWSY 248

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-40
Identity = 97/187 (51.87%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 2   ASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S  +   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ------------------ 121
            AVLNFP  + SYPVP S+S ADIR +AAAAAA+K  ++  +                  
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARE 127

Query: 122 -NTDHSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSG 170
            + D+     S    EF+DEE +  MPNLL +MAEGM+++PP    S    D  S  +S 
Sbjct: 128 CHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENSN 187

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-35
Identity = 89/180 (49.44%), Postives = 115/180 (63.89%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           S  +  RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG
Sbjct: 5   SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKG 64

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAA--------ALKKVDDQGQNTDHSFHHQ 122
             A LNFP  ++S P P S SPADI+ +AA+AA        A+   ++  Q +  +  + 
Sbjct: 65  SQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNS 124

Query: 123 SLPT---NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           S      N F+DE+ +F MPN+L++MAEGMLLSPPR T   + +D   +   GD  LW++
Sbjct: 125 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 7.2e-28
Identity = 83/175 (47.43%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 69  PELIASYPVPASSSPADIRFSAAAAAALKKVDD--QGQNTDHSFHH-----QSLPTNE-- 128
            +      +P S+   DI+  AAA AAL   D+      T+H         +++ T E  
Sbjct: 104 ADSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS 163

Query: 129 ----FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
               ++DEE +FGMP LL +MAEGMLL PP    S   +  Y     GD +LWSY
Sbjct: 164 EGAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy TrEMBL
Match: A0A5D3CD98 (Ethylene-responsive transcription factor ERF026-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3841G00010 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 144/168 (85.71%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ +ASYPVPAS+SP DIR +AAAAAA K+VDDQG+N  H+ H+QS P NEFVDE
Sbjct: 62  AVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLL+DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 122 EALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy TrEMBL
Match: A0A1S3BKD7 (ethylene-responsive transcription factor ERF026-like OS=Cucumis melo OX=3656 GN=LOC103490987 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 144/168 (85.71%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSS RHDHYKGIRCR GKWVSEIREPRKT RIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSKRHDHYKGIRCRGGKWVSEIREPRKTNRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ +ASYPVPAS+SP DIR +AAAAAA K+VDDQG+N  H+ H+QS P NEFVDE
Sbjct: 62  AVLNFPDSVASYPVPASTSPNDIRIAAAAAAASKRVDDQGENNYHNSHYQSPPANEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLL+DMAEGMLLSPPRM SSPSRHDYYSWNSSGDGNLWSYH
Sbjct: 122 EALFGMPNLLLDMAEGMLLSPPRMNSSPSRHDYYSWNSSGDGNLWSYH 169

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy TrEMBL
Match: A0A6J1FLJ8 (ethylene-responsive transcription factor ERF026-like OS=Cucurbita moschata OX=3662 GN=LOC111446516 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 135/168 (80.36%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSSN+H HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVA LALKGC 
Sbjct: 2   ASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGCK 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ I SYPVP S SPADIR +AA AAA  K  D G+ + ++ HH S PT+EFVDE
Sbjct: 62  AVLNFPDSIGSYPVPVSMSPADIRVAAATAAAASKRIDHGEGS-YNNHHPSPPTDEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLLVDMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 122 EALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 168

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy TrEMBL
Match: A0A6J1KVC5 (ethylene-responsive transcription factor ERF026-like OS=Cucurbita maxima OX=3661 GN=LOC111498515 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.9e-70
Identity = 137/168 (81.55%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSSN+H HYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN
Sbjct: 2   ASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ I SYPVP S S  DIR +AAAAA+  K  D G+ + +S HHQS PT+EFVDE
Sbjct: 62  AVLNFPDSIGSYPVPTSMSSTDIRVAAAAAAS--KRIDHGEGSYNS-HHQSPPTDEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLLVDMAEGMLLSPPR++SSPSRH+YYSWNSSGDGNLWSY+
Sbjct: 122 EALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 166

[Close]

BLAST of CaUC10G183000.1 vs. ExPASy TrEMBL
Match: A0A6J1HL21 (ethylene-responsive transcription factor ERF027-like OS=Cucurbita maxima OX=3661 GN=LOC111465128 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 134/168 (79.76%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           ++TSSNRH +YKG+RCRSGKWVSEIREPRKTTRIWLGTYPT EMAAAAYDVAALALKG N
Sbjct: 2   ASTSSNRHGNYKGVRCRSGKWVSEIREPRKTTRIWLGTYPTSEMAAAAYDVAALALKGSN 61

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQNTDHSFHHQSLPTNEFVDE 122
           AVLNFP+ I SYP+PAS SPADIR +AAAAAA KKV DQG++ +HS  HQS P++EFVDE
Sbjct: 62  AVLNFPDSIRSYPIPASKSPADIRLAAAAAAATKKV-DQGESNNHSC-HQSPPSDEFVDE 121

Query: 123 EALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSYH 171
           EALFGMPNLL DMA GMLL PPRM+ SPS HD YSWNS+GD NLWSYH
Sbjct: 122 EALFGMPNLLHDMAVGMLLPPPRMSGSPSSHDCYSWNSTGDENLWSYH 167

[Close]

BLAST of CaUC10G183000.1 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 7.4e-44
Identity = 101/181 (55.80%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCN 62
           +T  S +H  ++GIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAALALKG +
Sbjct: 55  ATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPD 114

Query: 63  AVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQN--------------TDHS 122
           AVLNFP L  +Y  P S+S ADIR +A+ AA +K+ D  G                 + S
Sbjct: 115 AVLNFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVS 174

Query: 123 FHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWS 170
            +  SL   EF+DEEA+  MP LL +MAEGML+SPPRM   P+  D    N  GD NLWS
Sbjct: 175 CNSCSL---EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWS 231

[Close]

BLAST of CaUC10G183000.1 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 9.0e-42
Identity = 97/187 (51.87%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 2   ASTTSSNRHDHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGC 61
           A   S  +   Y+GIRCRSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA+ALKG 
Sbjct: 8   AGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGR 67

Query: 62  NAVLNFPELIASYPVPASSSPADIRFSAAAAAALKKVDDQGQ------------------ 121
            AVLNFP  + SYPVP S+S ADIR +AAAAAA+K  ++  +                  
Sbjct: 68  EAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARE 127

Query: 122 -NTDHSFHHQSLPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSG 170
            + D+     S    EF+DEE +  MPNLL +MAEGM+++PP    S    D  S  +S 
Sbjct: 128 CHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDD--SPENSN 187

[Close]

BLAST of CaUC10G183000.1 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-36
Identity = 89/180 (49.44%), Postives = 115/180 (63.89%), Query Frame = 0


Query: 3   STTSSNRHDHYKGIRCR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 62
           S  +  RH  Y+G+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAALALKG
Sbjct: 5   SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKG 64

Query: 63  CNAVLNFPELIASYPVPASSSPADIRFSAAAAA--------ALKKVDDQGQNTDHSFHHQ 122
             A LNFP  ++S P P S SPADI+ +AA+AA        A+   ++  Q +  +  + 
Sbjct: 65  SQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNS 124

Query: 123 SLPT---NEFVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
           S      N F+DE+ +F MPN+L++MAEGMLLSPPR T   + +D   +   GD  LW++
Sbjct: 125 SYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGF-PGGDDYLWNF 183

[Close]

BLAST of CaUC10G183000.1 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 125.2 bits (313), Expect = 5.1e-29
Identity = 83/175 (47.43%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 9   RHDHYKGIRCR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNF 68
           RH  Y+G+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAALAL+G +A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 69  PELIASYPVPASSSPADIRFSAAAAAALKKVDD--QGQNTDHSFHH-----QSLPTNE-- 128
            +      +P S+   DI+  AAA AAL   D+      T+H         +++ T E  
Sbjct: 104 ADSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS 163

Query: 129 ----FVDEEALFGMPNLLVDMAEGMLLSPPRMTSSPSRHDYYSWNSSGDGNLWSY 170
               ++DEE +FGMP LL +MAEGMLL PP    S   +  Y     GD +LWSY
Sbjct: 164 EGAFYMDEETMFGMPTLLDNMAEGMLLPPP----SVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CaUC10G183000.1 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-27
Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 2   ASTTSSNRHDHYKGIRCRS-GKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKG 61
           AS++SS +H  Y+G+R RS GKWVSEIR+PRK TRIWLGT+ T +MAA A+DVAAL +KG
Sbjct: 50  ASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKG 109

Query: 62  CNAVLNFPELIASYPVPASSSPADIRFSAAAAAAL 96
            +AVLNFPEL + +P PASSSP DI+ +AA AAA+
Sbjct: 110 SSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAM 144

The following BLAST results are available for this feature:

BLAST of CaUC10G183000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448976.1	7.3e-78	85.71	PREDICTED: ethylene-responsive transcription factor ERF026-like [Cucumis melo] >...	[more]
XP_031737859.1	1.6e-77	86.31	ethylene-responsive transcription factor ERF026-like [Cucumis sativus] >KAE86500...	[more]
XP_038905599.1	2.8e-77	86.83	ethylene-responsive transcription factor ERF026-like [Benincasa hispida]	[more]
KAG7028324.1	4.6e-72	82.14	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023540856.1	3.3e-70	80.95	ethylene-responsive transcription factor ERF026-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of CaUC10G183000.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ90	1.0e-42	55.80	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9CAN9	2.3e-42	57.06	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	1.3e-40	51.87	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SJR0	2.1e-35	49.44	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93835	7.2e-28	47.43	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CaUC10G183000.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD98	3.5e-78	85.71	Ethylene-responsive transcription factor ERF026-like protein OS=Cucumis melo var...	[more]
A0A1S3BKD7	3.5e-78	85.71	ethylene-responsive transcription factor ERF026-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1FLJ8	1.6e-70	80.36	ethylene-responsive transcription factor ERF026-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KVC5	7.9e-70	81.55	ethylene-responsive transcription factor ERF026-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HL21	1.6e-67	79.76	ethylene-responsive transcription factor ERF027-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of CaUC10G183000.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52020.1	7.4e-44	55.80	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	9.0e-42	51.87	Integrase-type DNA-binding superfamily protein	[more]
AT2G36450.1	1.5e-36	49.44	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	5.1e-29	47.43	C-repeat/DRE binding factor 1	[more]
AT3G16280.1	4.8e-27	65.26	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 12..74 e-value: 5.4E-28 score: 109.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 12..60 e-value: 5.5E-11 score: 42.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 12..68 score: 19.651295
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 12..70 e-value: 4.8722E-17 score: 69.2227
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 11..69 e-value: 9.9E-21 score: 75.7
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 6..169
None	No IPR available	PANTHER	PTHR31985:SF167	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026	coord: 6..169
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 12..69

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC10G183000	CaUC10G183000	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G183000.1-exon	CaUC10G183000.1-exon-Ciama_Chr10:4713214..4713726	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G183000.1-cds	CaUC10G183000.1-cds-Ciama_Chr10:4713214..4713726	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC10G183000.1	CaUC10G183000.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0019760	glucosinolate metabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding