CaUC05G104120.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G104120.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	binding partner of ACD11 1-like
Location	Ciama_Chr05: 34722791 .. 34730009 (+)
Sequence length	1535
RNA-Seq Expression	CaUC05G104120.1
Synteny	CaUC05G104120.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCACTGTGGTCTAAAGTTATTCAGACCGGCGGCGGAGGCTTTGGCGCCTCCTTTCTTCGGGAGTTTTCTCAAGTTTGTCTTCAGAAATTTCATCCTCTGGGAGTCAATTCCTTTATCTTCCTCTGCAAGTTTCATATTTCTAAGAACGAATTGGCGAATTAAGTTACTGTTGCTGCGAAAATATGAATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTTGTTGAGATTGTTAGGTATTCATTTTATTCCGTATCAAGCATTTAATTTCATGTCCTCGAGTCTGTAATTTCACGATCTTTACATCTTTTCTGGTGAACAAGTCGTTTATAGATGTCAATCGATCTTTCTAAATGAGATTAGGTTTGAGTTTGAAGAAGCTGTTTAGTGGTGTATGGCCTTTTTGTTAGAGTTTATATTTTAGTTTGTTTTTCATTTTTTTTTGAAAGCTATTGGTGTAAGGATTTCTGGTTTCATGAAAACAGATCTGGTGAAGATGCCTGCACTGCCTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGTGAGTATTTTAATTCTAAATAAGCTTCAGGCCTACAATACAGTATTTGATTCAATTCTTCCATTACTCTTTATTTGGAGCTACAGGGTGTGCCAGCGCGCGCACTCTGATACTATATAGACATGTGATCTTTATATATATTTTTTATTTGATTTATGTTATTAATTTCTCTGACTTTTCATTTTTTTGTATATCAAGTGAACACGAGAATCTTACGGATGCTCGAATTTAAAGGATATACCTTTCAAATTATTAATTTTTCTGAAGAATATAATTATATGGATTTAATGCATTGCATCGATAGAATAGTGAAAACCGTATTCTTGGGTTGTGAGCCACATATTTAATTTATAATGCCAAGTTAAATTGCTCTTTTAAAAATTAACTTGTGTTGATGTGGCTCATTTGGCAAGTTTTATTTTAGGAAGAATGACAAAATGGCAATTTTTTTTTTTTCTCGATTTAAAATGCTATTCAATTTGCTCTGGCTTCCTTAGAGGAGGGAACTCTTCATCTGGTTTTGGTGAAGGATCTCTTTGTTTTTCCTCAATGATCCAACCGATTTCCTTTGTAGAGGATTGAACCCGTGTCTTACTGGATTCCTATTAATAGTGAAGGATGCCTTCGTTTCCTCCAGTAAGGCCCTTGCCCTTTGTTAGAGAAGAAAACCTGAGTGTGGTTAGACTTTTGCTAAATAATAATAATAAAAAAACAACAATAACTATCATAATCGAATAATGGAAGGGAGAGAGGGAGAGAGAGAGAGAGAAATTGGTTTTCAAATAATGAAAATTGCTTCAGCATTGAACCATAAAAGTATGGTTTTGGCATCATTAAATCTGGAGAAGAAGCCATAATAGGAATATACCATTGGAATGTTCTAAAGAAGCATGAACGTGGATATAACTACGCATCCTGTTGAAAAAATGGACCCGTTTATCATTGTATAGACGTTGCATTTAAATGTTTTAGGCATATGACAAATCTGAAACTTTTTATACAAAAAATAATTAAAAAATAATAATAATAAAAGAAGATAAGTCTGAACCATAGACATACGGCAGATCTGAATCTTTGATTGAGAAACAATAACATTGTTGTTTTTGTTACTGCTGCTGCTGAGTCTGCGACTATAGGCAATAACGTTGTTGTTGTTGTTGTTGTTGTTGAATTTGTGATAACTAGCTGTTGTTGTTGAGTACACCGTGATTAGAGATAAAATTCTTTTGGATCAGAGTGATTAGAGATAAAATGACAATGTTGTTTTTTAATCCATAGTTATTAATAGTTATCGTTGAATAATCTGCTAGATACATTTTTCTCTCCTTATTCTCTTTTGCTGCAAATTTTCGTTGTTTTTTAGACAGGAATTATTAAAGGATTTTCAACCACATCAGATGGATATCCTCTTGGATTCAAATGATAAAGGAATTTCAATATGGATACTAAATTTCAGTTTGTAAGCATCGACTGTTCTGTTTAGATTTGCCAAAGTGAGCTTAGCTCAATGGTATTGGCATGTACTCCATCTCTAGAGGTCGGAGGTTCAATCCCCCAACCCGCAATTTTTGTACTAAAAAAAACTATCTCGTGGTCTGATTATCCTGTATACGCTTTGGTCTACTGAAGGTTCTCAATCAATGTTCATTTCTGGTTATGTGCATAGTGATGGTGGAAATTCCTCTATTCACCTGATCGGACTTCATCATGCCATTAGTTTTTCTCCAAGGAGATGGTGGTCGTTACTTTTCATCCTGTGTTTTACACCTGATAATAATGATCACGCTTTTAGAGTTCAATATCTGATTCCTGCAGGGTGCAACAATTGTAGATCAAAGAGTATGTATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAATACTGCTGTAAGTGTCAAAAATGATATTTATTAATATTTCCCACCTGTTGCAATTTGAAAATGTTTTCTTCCTATAGACAATCTTTGATTAATTTATGAGTTTTCCATCTTGTAGTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAGCGCAGTGACCATGGCCCAAGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGATACATTAACCAAAGCCAAAGCCTTTGATGAATCTCATCAGGTTTCAACAACGGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTTACTGATATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCGTGGATGAGAAGTACCATGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTGAGGAGTAGCTACTTTTCTCGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAGTGCGAGAAAGTGCTTCTACTCACCCCTTGTAAATAAAGAAATTTAAATGCATACCTTAAAATTTGCAAGTATTACGATATTTTATCAGAGCGTACATTCATCTGAAAGCTGTATGTATAAGTTTAAACTTTACTTGACCCCACAAGTTTGCTAAATTTTAACCCCAAATTCGGTAAAATTCGATCAGAGATGGTCTTTATTGAGTCGTTTGTCAGTTTGTAAATTCAGTATCCTTGGAGTCAAATCTATTCTTTTAGCACTCTTGGAAACGTCTCCCAAATTGTACTTTTTACAATCCTTCTGTTACAGATTGTCTTTTCCTTAATCAATTTCATAGTTGAAGTTGCTCTCGAATTTAATAGATTTTATTTGGTTCATTTAGATTGTTGATTGTCTATTAGGGAGGCCATATGGATGGATGCTTGATCTGGGCGCAACAAGAGTGAAGTCCCGCATGCAATTTCATGATGTTGCCGCCTAGGATGGTTCCTTCCAGCTGTAATTGTCTGAGACTTGCAACTCGCTCCAGCAGGCAATAGCTCTCTGCAAGTTACAGGTCGGTCTAGTCTTCAATTTTCTGCTGTGTACTGCAGTCTCATCAACTAGACATAGAACATGCATTTTTATTATATGATTCTTGGCATTTAGGCAACACAAGGAACAAACACGAATGTTATATCTAAGCTGTTAATTAAATGATCAACTCTCAGCCATAACATTTGAATCATGCATTGCACAATATTCCCACACACCGTGGCTGTATTGTCGTGGTCGGAGTCGATCACATCGTCTGCTGCAAGTACATAAATAGTTTCAATAGAAATGATCATGGACCCTTATTTATCAAAAAGCATCTTCCCTGTATGGATCAACCATTTTCTAGTACGTTGAAAAGCATCCCATCCAACAAAATAGAAACTTGAATATTTTACTCGGATTGAAACAGTCGATACTGTTGATAAACTAAAGCACGATCCAGGAAATACTGAACCTAAGTCAGTCCAGTCAAAACGTTATTAACTGAGAATTATGGAATTGAAAAAGGAAATAAATAACATAAAAAGAAAATAGAAGAAGGAGCTTGTATATTCTGACTTTTGCAGAAAATGATGATAGGAAGGACCAATTATGTTGGGGCAATTGTAGTGTACAAATTTTTGTTTTTGGGGGTATCTGAAATAATTGTCCTTTTGGAACTGTTTGGACCTTTTTGTTGCTGTGATGGGTTAAGAGACAGACCCCCTTTGAGTGGTGGGTCAGTCATAGTGTGCGATTGTTGGTGTGGGTCTTAACAAATAACAGTGTTTTGAAACTGACTGAGCACGTAGGAGGGAAGTCATTGTTTCTCCAAAGGAAACTCCTGCCTCCATTTCCTACACTTCTTAACCAACACACAGCAGCTTTCTCTTCCTTTTATCCACTGCACCGGCCTTTATGTTTATCTTCCATAAACCATCAACTATCAAGGAAGGTCCGACTTTAGACCTAGGTTTTTAGATCTATAGATTTCAAATTTTTTTGCAGCTTGTTACTTTAGTTTGTCTATCGTAGACTACTGTGATTTGGTTAATTAGGTAAAAACCCTAAAGTTATCCTATCTTCTAAAACTTGCTTCTTAAATGTAAAATGTCTCTGTTTTGGGTCATAAAAAATCCAAAGAATGCTGTGTCATGTGTCTCTGTTTGTCGCTCTCTCTTTCTGAAGATGAAAGAATCCCAAGGCCTAGAGTGTTTGATTCATCTTCCTTTATGTTAGTGAAGGACATGACGTCCTTCATCAATAAAGAGAACAAAATTTGAGGTTCACATCAAACTTATTTTAATATTTATTGGATATATACACATATGTTAATCAATCTTATCCTATCCTTTTCTTCTTTTTATTCCCTCCCTCTCCTCTCTTACGTCTTACGTTATGTTTGTAAAGGATTCCAAATCCTTTGTCAAAGCAAAGGGCCCAACAGTATGAATGGCCATCTCTTCACAGATGGCCAGAATGCAGCTGCCATCTGCTTTAAGGGATTTTTTTCCCCCTTTTAAATTCCCTAAGACATCCTTCGAGAGGGGGAGGACAGTGGGAAAGTGAAAAGTGAAGTATCAAAATTTCTCACTACATCCACAAATTTGATCTAAAATTCTGCAGAATAAATGGTGTGTGTATGTGGGTTGATAATGGTTATTTGTTAAAATTCAATGTTAAAGAGAGAATACAAAAAATACATGAAAAATCTTACTAAAGATATATGGAATTCATTTTGTCAAATTTCTCTACTAAGACAGAATTTGAATCCAAACAAGAATTTAGGTCACATCCATCATCCATGGCGATGAATAGGTAAAACAATTTAATCCAAGGTGACACTAAAATGACTTTGAGAATAAGATTTTGTAATAAAACGACTTAAAGTGGGAGAAGAGAGATAAGAATAAAAAAGAAAAAAGAAAAAAGAAAAAAACTTAAAAGAGATTCCATTGATTGACTTTATTAACGACGTCCCATGAACCATGATTGGGCTATGAATTAAAAATGATTAAACAGCCTAGAAGGACGGTAGAATAATCCACAATTTTGTGTAGTTGGTGGACAAGGAATGAAAATCACAAGTTAAATCCAAAATCACACACACACACACACACACACACACACACATATAGTGGTGTGTTGTAATAAAACACATCTCTTTTTCTACTAGCAAACACTATAATTATGATATCCAAAAGGAAGGCACACCATTGGAAATGTTTTCGAAACATTCTAAAAGTTCTCTTTAACTAATCACAACACTCTCTTAAAAAAAAATTATTAAATTTGGGTATCATATCTCAAAAACTCACAGTGATGTACCATGAAAAGAACCAGCCAAATCATCTCGATAACTTCCAGGACCAATGTGAATTGTGACGCACAGTTAAAAAAGAAAACATACATATAAGTATACAAATTCAAAAGTGGACAAATCAGCTTTTTGGAGCATTCTTCAAATTTTAAAATTAATTTTGATTTTTTTAAGTACAGCATCCCCTCCACTTGTTTGACAAAAGGGACACAAAACTTTTAAGATTTTTATTTCAATCTAAATAAGGTAGCTATGGTTAAAGCCACTTTCTTTTCCCTCCCTTTTCATATTATACAAATATAAATATACAACACTGCGTTCATTTCAATCTGCAAAAGAAAATCTTTTTAGAAGACTTTTTGAATCCTAAACAAACTCACTGTTCATTAATGTTCAAACCAATCAGAAAATTGTCCCTACCAAACCAACGGCTGAGATCGCGAATATCACCTTAGCCATAAGTCATTATTATAATAATAACTTTTTTTTTTTTTTAAAAAAAAGAAGAAATTAAAGAAACTGTAAACTAAACCAGTTGTTGGGGAATCCCTATCGCTGCATATCTTCCTGAGTGGAAGGGGAAATGAATATATATTTATAGAAAACAAATCATTCAGAAAACTTAATTAAAAAAAGGTGTGTATATATATATATATATTTTGAAAAAAAGAGAAAATCGAGTGACGTCAGAGAGAGGAAGCACATGGGATCAATCAGTGTCAGCTGAATACACCAGAAGCATGAACACATGTGGAGGAGAAGATTCAGATTACTAATTAAAAATTAACTTTTTTTAATTTTTTTTTATTTTTAATAATAAAGAATTTTAATTTAAATATTTGAAAAAAATGTGCAACAGGGCAGGGGGAAGAACATGGATCCACCCCATTCCAATGGGGCAGTGCAAAGCTTCCAACTCATATGGCATGTGATGCAGCTGAGAATCCTTTGTCTCTGCCCAATTTCTTTTTTCAAGGTCACTATTTTCCTTTTCTTTTTCCTTTTCTTTTTTATTTTCCCCCTTCTAAATGGGACCCCTTTTCAGTCTCATCATCACCAATTCAAAAGACATCACCAGGGTCCCCTATTTTCTAACCTCTGTAGGCTTCATTGTGGTGGAATTCCCTCCATTTTTTTTCTTTCGAACCCTAAACCCCCAAAAGAAAAGGAAAAAGAAAGTGTAATTTAGTTCATATTTATATCAATTTTGACTGTCTGAATTTATTACACAAATCCACTGTTGAGGAAAAAAAGGAATCTCTTAAATATTTGGATGGAGTAGTGGATATATACAAT

mRNA sequence

CTCACTGTGGTCTAAAGTTATTCAGACCGGCGGCGGAGGCTTTGGCGCCTCCTTTCTTCGGGAGTTTTCTCAAGTTTGTCTTCAGAAATTTCATCCTCTGGGAGTCAATTCCTTTATCTTCCTCTGCAAGTTTCATATTTCTAAGAACGAATTGGCGAATTAAGTTACTGTTGCTGCGAAAATATGAATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTTGTTGAGATTGTTAGATCTGGTGAAGATGCCTGCACTGCCTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAACAATTGTAGATCAAAGAGTATGTATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAATACTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAGCGCAGTGACCATGGCCCAAGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGATACATTAACCAAAGCCAAAGCCTTTGATGAATCTCATCAGGTTTCAACAACGGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTTACTGATATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCGTGGATGAGAAGTACCATGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTGAGGAGTAGCTACTTTTCTCGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAGTGCGAGAAAGTGCTTCTACTCACCCCTTGGAGGCCATATGGATGGATGCTTGATCTGGGCGCAACAAGAGTGAAGTCCCGCATGCAATTTCATGATGTTGCCGCCTAGGATGGTTCCTTCCAGCTGTAATTGTCTGAGACTTGCAACTCGCTCCAGCAGGCAATAGCTCTCTGCAAGTTACAGGGCAGGGGGAAGAACATGGATCCACCCCATTCCAATGGGGCAGTGCAAAGCTTCCAACTCATATGGCATGTGATGCAGCTGAGAATCCTTTGTCTCTGCCCAATTTCTTTTTTCAAGGTCACTATTTTCCTTTTCTTTTTCCTTTTCTTTTTTATTTTCCCCCTTCTAAATGGGACCCCTTTTCAGTCTCATCATCACCAATTCAAAAGACATCACCAGGGTCCCCTATTTTCTAACCTCTGTAGGCTTCATTGTGGTGGAATTCCCTCCATTTTTTTTCTTTCGAACCCTAAACCCCCAAAAGAAAAGGAAAAAGAAAGTGTAATTTAGTTCATATTTATATCAATTTTGACTGTCTGAATTTATTACACAAATCCACTGTTGAGGAAAAAAAGGAATCTCTTAAATATTTGGATGGAGTAGTGGATATATACAAT

Coding sequence (CDS)

ATGAATCCTGGTGGTTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTTGTTGAGATTGTTAGATCTGGTGAAGATGCCTGCACTGCCTATGTAACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCAACAATTGTAGATCAAAGAGTATGTATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAATACTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAGTGCTGGTAGCGCAGTGACCATGGCCCAAGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGTAAAGATACATTAACCAAAGCCAAAGCCTTTGATGAATCTCATCAGGTTTCAACAACGGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGCCTTACTGATATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCGTGGATGAGAAGTACCATGTATTGCAGACCACCAAATCAGCTATATCAGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTGAGGAGTAGCTACTTTTCTCGGGGAGCTCTTTTCATGTCTGATGCCCTGAATCGAGCAGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAG

Protein sequence

MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKTVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRGLEH

Homology

[Close]

BLAST of CaUC05G104120.1 vs. NCBI nr
Match: XP_038892042.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 5.3e-122
Identity = 231/244 (94.67%), Postives = 240/244 (98.36%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAI+LVEI+RSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIDLVEIIRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNT-ASAQRSQFISSAGSAVTMA 120
           CLLSGA I+DQRVCITRWG+FDDEFGFWSR SGHHEED+T ASAQRSQFISSAG+AVTMA
Sbjct: 61  CLLSGAKIIDQRVCITRWGYFDDEFGFWSRSSGHHEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTMLAMGYVLGKDTLTKAKA DESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKALDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180

Query: 181 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240
           T+DEKYHVLQTTKSAISATG+TAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR
Sbjct: 181 TMDEKYHVLQTTKSAISATGKTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240

Query: 241 GLEH 244
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of CaUC05G104120.1 vs. NCBI nr
Match: XP_004135186.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN51899.1 hypothetical protein Csa_008734 [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 3.4e-121
Identity = 231/244 (94.67%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNT-ASAQRSQFISSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EED+T ASAQRSQFISSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVS TAAAKVADLSHRIGLTDM+GAG+EAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVK 180

Query: 181 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240
           +VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 244
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of CaUC05G104120.1 vs. NCBI nr
Match: XP_022988849.1 (binding partner of ACD11 1-like [Cucurbita maxima] >XP_022988857.1 binding partner of ACD11 1-like [Cucurbita maxima] >XP_023534995.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023535002.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443.7 bits (1140), Expect = 1.0e-120
Identity = 226/243 (93.00%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSPKA EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSG+HEED+TASAQRSQFISSAG+AVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTML+MGYVLGKD LTKAK FDESHQVS TAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 VDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 240
           +DEKYHVLQTTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGSRG
Sbjct: 181 MDEKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 LEH 244
           +EH
Sbjct: 241 VEH 243

[Close]

BLAST of CaUC05G104120.1 vs. NCBI nr
Match: XP_008446330.1 (PREDICTED: binding partner of ACD11 1 [Cucumis melo] >KAA0034401.1 binding partner of ACD11 1 [Cucumis melo var. makuwa] >TYK15522.1 binding partner of ACD11 1 [Cucumis melo var. makuwa])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 230/244 (94.26%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNT-ASAQRSQFISSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EED+T ASAQRSQFISSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTMLAMGYVLGKDT TKAKAFDESHQVS TAAAKVADLSHRIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240
           +VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 244
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of CaUC05G104120.1 vs. NCBI nr
Match: XP_022957393.1 (binding partner of ACD11 1-like [Cucurbita moschata] >XP_022957394.1 binding partner of ACD11 1-like [Cucurbita moschata])

HSP 1 Score: 442.6 bits (1137), Expect = 2.2e-120
Identity = 225/243 (92.59%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSPKA EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSG+HEED+TASAQRSQFISSAG+AVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTML+MGYVLGKD LTKAK FDESHQVS TAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 VDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 240
           +D+KYHVLQTTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGSRG
Sbjct: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 LEH 244
           +EH
Sbjct: 241 VEH 243

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 94/240 (39.17%), Postives = 140/240 (58.33%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGA 66
           +V+V  LS  ATE D+ +FF+FSG +E ++I +S E   +AYVTFK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQEVVKTM 126
           +I DQ V I    ++       S P+  H E  ++ A+         S V  A++VV +M
Sbjct: 67  SIADQSVIIELAPNY-------SPPAAPHAETQSSGAE---------SVVQKAEDVVSSM 126

Query: 127 LAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGF----EAVKTVD 186
           LA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  + AG     E +K VD
Sbjct: 127 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 186

Query: 187 EKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRGLE 243
           + + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+ A ++G +  E
Sbjct: 187 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 227

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 51/188 (27.13%), Postives = 83/188 (44.15%), Query Frame = 0


Query: 8   VEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGAT 67
           V VT +SP+ TEK + DFF+F G +  +   +SGE   TA + F+   + +TA LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGETQ-TAKIQFERPSATKTALLLQDAL 64

Query: 68  IVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQE------ 127
           +   ++ IT                    ED  A++   Q    AG      QE      
Sbjct: 65  LGQNKIQIT-------------------SEDGGAASTTDQ--GGAGGDQAARQEDKPRSA 124

Query: 128 VVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKTV 187
           ++  +L+ GY L   TL K+   D+S+ VS+                 ++ +    V++V
Sbjct: 125 IISELLSRGYHLSDVTLEKSIQLDQSYGVSSK-------------FKGILESALSGVRSV 157

Query: 188 DEKYHVLQ 190
           +E+YHV +
Sbjct: 185 NERYHVTE 157

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy TrEMBL
Match: A0A0A0KSM6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121
Identity = 231/244 (94.67%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPVATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNT-ASAQRSQFISSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EED+T ASAQRSQFISSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTPASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVS TAAAKVADLSHRIGLTDM+GAG+EAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGYEAVK 180

Query: 181 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240
           +VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 244
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy TrEMBL
Match: A0A6J1JE77 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.8e-121
Identity = 226/243 (93.00%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSPKA EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSG+HEED+TASAQRSQFISSAG+AVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTML+MGYVLGKD LTKAK FDESHQVS TAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 VDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 240
           +DEKYHVLQTTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGSRG
Sbjct: 181 MDEKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 LEH 244
           +EH
Sbjct: 241 VEH 243

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy TrEMBL
Match: A0A5D3CVI0 (Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00120 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.3e-121
Identity = 230/244 (94.26%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNT-ASAQRSQFISSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EED+T ASAQRSQFISSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTMLAMGYVLGKDT TKAKAFDESHQVS TAAAKVADLSHRIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240
           +VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 244
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy TrEMBL
Match: A0A1S3BET5 (binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.3e-121
Identity = 230/244 (94.26%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETA
Sbjct: 1   MNPGGYTVEVTGLSPIATEKDVLDFFAFSGAIELVEIVRSGDDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNT-ASAQRSQFISSAGSAVTMA 120
           CLLSGA IVDQRVCITRWGHFDDEFGFWSRP GH EED+T ASAQRSQFISSAG+AVTMA
Sbjct: 61  CLLSGAKIVDQRVCITRWGHFDDEFGFWSRPPGHQEEDSTSASAQRSQFISSAGNAVTMA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           QEVVKTMLAMGYVLGKDT TKAKAFDESHQVS TAAAKVADLSHRIGLTDM+GAGFEAVK
Sbjct: 121 QEVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSHRIGLTDMLGAGFEAVK 180

Query: 181 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 240
           +VDEKYHVL+TTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAK AADLGSR
Sbjct: 181 SVDEKYHVLETTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSR 240

Query: 241 GLEH 244
           GLEH
Sbjct: 241 GLEH 244

[Close]

BLAST of CaUC05G104120.1 vs. ExPASy TrEMBL
Match: A0A6J1H035 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458806 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 225/243 (92.59%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           M+PGGYTVEVTGLSPKA EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETA
Sbjct: 1   MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQ 120
           CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSG+HEED+TASAQRSQFISSAG+AVTMAQ
Sbjct: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFISSAGNAVTMAQ 120

Query: 121 EVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKT 180
           EVVKTML+MGYVLGKD LTKAK FDESHQVS TAAAKVADLSHRIGLTDMIGAGFEAVKT
Sbjct: 121 EVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKT 180

Query: 181 VDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 240
           +D+KYHVLQTTKSAISATGRTAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGSRG
Sbjct: 181 MDDKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG 240

Query: 241 LEH 244
           +EH
Sbjct: 241 VEH 243

[Close]

BLAST of CaUC05G104120.1 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-78
Identity = 155/238 (65.13%), Postives = 185/238 (77.73%), Query Frame = 0


Query: 5   GYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLS 64
           GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTAS--AQRSQFISSAGSAVTMAQEV 124
           GATI+DQRVCITRWG   +EF FW+  S   E+++ +   AQRS+F  +AG AVT AQEV
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEF--NAGEAVTKAQEV 125

Query: 125 VKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVKTVD 184
           VK MLA G+VLGKD L+KAKAFDESH VS  A A+V+ L  RIGLTD I  G EAV+  D
Sbjct: 126 VKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTD 185

Query: 185 EKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRG 241
           ++YHV  T KSA+ ATGRTAAAAA +VV SSYFS GAL++S AL RAAK A+DLG+RG
Sbjct: 186 QRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAASDLGTRG 241

[Close]

BLAST of CaUC05G104120.1 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-55
Identity = 129/252 (51.19%), Postives = 163/252 (64.68%), Query Frame = 0


Query: 1   MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETA 60
           M P GY  +VT LSP+ATEKDV  FF+  G +ELVEI     DA TAYVTF+DAY+ + A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  CLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQ-FISSAGSAVTMA 120
            LLSGATIVDQ V I+ +G +  E       +   EED + +  RS  F SS G A+T+A
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESN-----NLRQEEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QEVVKTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGFEAVK 180
           Q+VV+TMLA GYVL KD + KAKA DES + S+  A K+A++SH +GLT  I +  E V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 TVDEKYHVLQTTKSAI-----------SATGRTAAAAADTVVRSSYFSRGALFMSDALNR 240
           + DEKYH    TKSA+           + TG+ AAAAA +VV S YF+ GAL+ SDAL R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

[Close]

BLAST of CaUC05G104120.1 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 94/243 (38.68%), Postives = 140/243 (57.61%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGA 66
           TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYVTFKD    ETA LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQ---RSQFISSAGSAVTMAQEVV 126
           TIVD  V ++              P      +  AS +    ++   +  S +  A++VV
Sbjct: 65  TIVDSSVIVS------------MAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVV 124

Query: 127 KTMLAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGF----EAVK 186
            +MLA G++LGKD + KAK+ DE HQ+++TA+AKVA    +IG TD I  G     E V+
Sbjct: 125 SSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVR 184

Query: 187 TVDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSR 243
            VD+KY V + TKSAI+A  +T + A   ++++ Y   GA +++ A N+ AK A ++G +
Sbjct: 185 EVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQK 235

[Close]

BLAST of CaUC05G104120.1 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-36
Identity = 90/240 (37.50%), Postives = 139/240 (57.92%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGA 66
           TV+V+ +S +ATE+D+ +FF+FSG I  +E     + +  AYVTFKD    ETA LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQEVVKTM 126
           TIVD  V +T    +       +      E + ++S  R        S    A++VV  M
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDV-----SVFRKAEDVVSGM 124

Query: 127 LAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAG----FEAVKTVD 186
           ++ G+VLGKD + KAK+ DE HQ+++TA+A+V     RIG T+ I  G     E VK VD
Sbjct: 125 ISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVD 184

Query: 187 EKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRGLE 243
           +K+ V + TKSAI+A  +T + A   ++++ Y   GA +++ A NR +K A ++G +  E
Sbjct: 185 QKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKE 239

[Close]

BLAST of CaUC05G104120.1 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-36
Identity = 94/240 (39.17%), Postives = 139/240 (57.92%), Query Frame = 0


Query: 7   TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGA 66
           +V+V  LS  ATE D+ +FF+FSG +E ++I  S E   +AYVTFK+    ETA LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  TIVDQRVCITRWGHFDDEFGFWSRPSGHHEEDNTASAQRSQFISSAGSAVTMAQEVVKTM 126
           +I DQ V I    ++       S P+  H E  ++ A+         S V  A++VV +M
Sbjct: 67  SIADQSVIIELAPNY-------SPPAAPHAETQSSGAE---------SVVQKAEDVVSSM 126

Query: 127 LAMGYVLGKDTLTKAKAFDESHQVSTTAAAKVADLSHRIGLTDMIGAGF----EAVKTVD 186
           LA G++LGKD + KAKAFDE H  ++TA A VA L  +IGL+  + AG     E +K VD
Sbjct: 127 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 186

Query: 187 EKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKVAADLGSRGLE 243
           + + V + TKS  +A  +T ++A   V+++ Y   G  + + A NR A+ A ++G +  E
Sbjct: 187 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 228

The following BLAST results are available for this feature:

BLAST of CaUC05G104120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892042.1	5.3e-122	94.67	binding partner of ACD11 1 [Benincasa hispida]	[more]
XP_004135186.1	3.4e-121	94.67	binding partner of ACD11 1 [Cucumis sativus] >KGN51899.1 hypothetical protein Cs...	[more]
XP_022988849.1	1.0e-120	93.00	binding partner of ACD11 1-like [Cucurbita maxima] >XP_022988857.1 binding partn...	[more]
XP_008446330.1	1.3e-120	94.26	PREDICTED: binding partner of ACD11 1 [Cucumis melo] >KAA0034401.1 binding partn...	[more]
XP_022957393.1	2.2e-120	92.59	binding partner of ACD11 1-like [Cucurbita moschata] >XP_022957394.1 binding par...	[more]

BLAST of CaUC05G104120.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.9e-34	39.17	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	1.8e-08	27.13	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of CaUC05G104120.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSM6	1.7e-121	94.67	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604930 PE=4 SV...	[more]
A0A6J1JE77	4.8e-121	93.00	binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486072 PE=4...	[more]
A0A5D3CVI0	6.3e-121	94.26	Binding partner of ACD11 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BET5	6.3e-121	94.26	binding partner of ACD11 1 OS=Cucumis melo OX=3656 GN=LOC103489100 PE=4 SV=1	[more]
A0A6J1H035	1.1e-120	92.59	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458806 PE...	[more]

BLAST of CaUC05G104120.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14340.1	1.0e-78	65.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G01210.1	1.2e-55	51.19	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	1.2e-36	38.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	1.6e-36	37.50	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	1.6e-36	39.17	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..77 e-value: 1.9E-4 score: 30.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 9.7E-6 score: 25.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..72 score: 8.944591
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..76 e-value: 1.3E-7 score: 33.4
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..241
None	No IPR available	PANTHER	PTHR32343:SF26	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..241
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 8..76 e-value: 1.24476E-35 score: 119.472
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC05G104120	CaUC05G104120	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G104120.1-exon	CaUC05G104120.1-exon-Ciama_Chr05:34722791..34723089	exon
CaUC05G104120.1-exon	CaUC05G104120.1-exon-Ciama_Chr05:34723339..34723414	exon
CaUC05G104120.1-exon	CaUC05G104120.1-exon-Ciama_Chr05:34725230..34725340	exon
CaUC05G104120.1-exon	CaUC05G104120.1-exon-Ciama_Chr05:34725449..34725905	exon
CaUC05G104120.1-exon	CaUC05G104120.1-exon-Ciama_Chr05:34726279..34726433	exon
CaUC05G104120.1-exon	CaUC05G104120.1-exon-Ciama_Chr05:34729573..34730009	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G104120.1-five_prime_utr	CaUC05G104120.1-five_prime_utr-Ciama_Chr05:34722791..34722973	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G104120.1-cds	CaUC05G104120.1-cds-Ciama_Chr05:34722974..34723089	CDS
CaUC05G104120.1-cds	CaUC05G104120.1-cds-Ciama_Chr05:34723339..34723414	CDS
CaUC05G104120.1-cds	CaUC05G104120.1-cds-Ciama_Chr05:34725230..34725340	CDS
CaUC05G104120.1-cds	CaUC05G104120.1-cds-Ciama_Chr05:34725449..34725877	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC05G104120.1-three_prime_utr	CaUC05G104120.1-three_prime_utr-Ciama_Chr05:34725878..34725905	three_prime_UTR
CaUC05G104120.1-three_prime_utr	CaUC05G104120.1-three_prime_utr-Ciama_Chr05:34726279..34726433	three_prime_UTR
CaUC05G104120.1-three_prime_utr	CaUC05G104120.1-three_prime_utr-Ciama_Chr05:34729573..34730009	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC05G104120.1	CaUC05G104120.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding