CaUC02G035090.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G035090.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Ciama_Chr02: 13688365 .. 13690282 (-)
Sequence length	1918
RNA-Seq Expression	CaUC02G035090.1
Synteny	CaUC02G035090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGAAGAGAGCTTCAAAAATCAAAATGGAAAGCGCCAGCTTCTACTGTTCAGCCTAAGCTTCGCAGCTAGTAGGATTAGAGGTTTCATTCGTTAATTTTGTTGCCCACTCACCGAGAAACCTTCGCAATCCAATTTCTCGGGCGAACTAATTTGCAATCCTTCTACAATCAATTCGGTTAGTTGATCTTCGAATCCCTGTTTTTCGATTTCCTTCCATTTGCATCTGAATTGGCCTGCAAATCAATTGAATAATAAGTTTTTTGAATTTATGTATCAATCACAAAACTCTGACTTGTGCGAAAATCATGAGGCTTTGGCCATTTCGTACATTTTCCACTCTGCTGGGCTCTGTAGCTAGAACTTCTGCTTCTGTAAACCCTAAATTGGATGTGAGTTTAGGGAAAAGGAATTGGAATTCAGTTCCAATACCTCACCGATCAATTCCCGAACCCAGAGGACAAGACCTTGATTTTGTTAACGTGGTACATAGCCACCTGATTCATTCGGATTGGACTAAGCTTGATTGTTTGTCATTGGGTCTGACAGCATTCAGAATCAAACACATTCTTCTGAAAACCCAGAAGGACTATGTACTCTCGCTCGAGTTCTTCAATTGGGTTTCGACTCAAAATCCTTCTTCTCATACCCTTGAGACCCATTGCATAATCCTCCATATACTTTCTAAACATAGAAAATTTAAATCTGCCGAATCAATTTTGAGGAGTATCATAGGATCTTGCTCTATTGACTTTCCTTCTAAGTTGTTTGAATCTTTACTGTACTCCTACCGACTGTGTGATTCTTCCCCCCATGTTTTTGATCTGCTTTTCAAGACTTTTGCTCATTTGAAGAAGTTTAGATATGCCTCTGATACATTTTGTAAGATGAAGGATTATGGCTTTTTACCCACTGTGGAATCATGTAATGCATTTCTCAGCTCCTTGCTTAAATTCAATAGGTACCGTATTGTGTTGGCCTTTTATGGGGAAATGCGGCGTAGTCGGATTTCCCCAAATTTGTATACAGTCAACATGGTTATTTGTGCTTCCTGTAAATTGGGAAGATTAGATAAGGCTACTGTGGTGTTTGAGGAAATGAGAACCATGGGGTTTTCTCCAAATGTTGTATCTTATAATACACTTATTTCCGGCTACTGCAATAAAGGTCTTCTGAGCTCAGCCATGAAGCTTAGAAGTGCAATGGAGAAAAATGGAGTTCCTCCAAATGCTGTTACATTTAGTATACTTATCAATGGATTCTGCAAGGATGTGAAGCTACAAGAAGCAAGTAAATTATTTGGTGAGATGAAAGGGATGAATTTATCTCCTACTACTGTCACCTACAATATTTTGATAAATGGCTACAGCAAAGTTGGCAATGGTGAGATGGGCAATAGGCTTTTTGAAGAGATGTCAAGGTTTCAAGTTAAAGCTGATATCCTTACTTACAATGCCCTGATATTGGGACTGTGCAAAGAGGGAAAGACAAAGAAAGCAGCATATCTGGTTAAAGAGCTTGATGAGAAGAGTCTTGTTCCGAATGCTTCAACCTTTTCTGCTCTAATTTATGGGCAATGTGTACTGAAGAAGTCGGAGCATGCATTTCAAATATATAAAAGCATGATAAAAAGTGGTTTTATTCCTTGCGATCAGACCTTTAGGATGTTGCTGTCCACTTTCTGCGAGAATGAGGATTATGATGGAGCAGTCCAGTTGTTGAAGGAAATGTTGAAGAGACACAAGGCTCCTGGTTTGAATAACTTATATGAGCTTTGTGCTGGACTTGGCCGGTGTGGAAAAGTTCAAACAGCTATAATGTTATGCACTGAGTTGGAAGCTCAACATCTCTTGCCAGAAGGTTTTGACAAATCCAAAGCATTTGGTTTGTTGCACAATAACGAAGATGCATTTGAATAG

mRNA sequence

GGCGAAGAGAGCTTCAAAAATCAAAATGGAAAGCGCCAGCTTCTACTGTTCAGCCTAAGCTTCGCAGCTAGTAGGATTAGAGGTTTCATTCGTTAATTTTGTTGCCCACTCACCGAGAAACCTTCGCAATCCAATTTCTCGGGCGAACTAATTTGCAATCCTTCTACAATCAATTCGGTTAGTTGATCTTCGAATCCCTGTTTTTCGATTTCCTTCCATTTGCATCTGAATTGGCCTGCAAATCAATTGAATAATAAGTTTTTTGAATTTATGTATCAATCACAAAACTCTGACTTGTGCGAAAATCATGAGGCTTTGGCCATTTCGTACATTTTCCACTCTGCTGGGCTCTGTAGCTAGAACTTCTGCTTCTGTAAACCCTAAATTGGATGTGAGTTTAGGGAAAAGGAATTGGAATTCAGTTCCAATACCTCACCGATCAATTCCCGAACCCAGAGGACAAGACCTTGATTTTGTTAACGTGGTACATAGCCACCTGATTCATTCGGATTGGACTAAGCTTGATTGTTTGTCATTGGGTCTGACAGCATTCAGAATCAAACACATTCTTCTGAAAACCCAGAAGGACTATGTACTCTCGCTCGAGTTCTTCAATTGGGTTTCGACTCAAAATCCTTCTTCTCATACCCTTGAGACCCATTGCATAATCCTCCATATACTTTCTAAACATAGAAAATTTAAATCTGCCGAATCAATTTTGAGGAGTATCATAGGATCTTGCTCTATTGACTTTCCTTCTAAGTTGTTTGAATCTTTACTGTACTCCTACCGACTGTGTGATTCTTCCCCCCATGTTTTTGATCTGCTTTTCAAGACTTTTGCTCATTTGAAGAAGTTTAGATATGCCTCTGATACATTTTGTAAGATGAAGGATTATGGCTTTTTACCCACTGTGGAATCATGTAATGCATTTCTCAGCTCCTTGCTTAAATTCAATAGGTACCGTATTGTGTTGGCCTTTTATGGGGAAATGCGGCGTAGTCGGATTTCCCCAAATTTGTATACAGTCAACATGGTTATTTGTGCTTCCTGTAAATTGGGAAGATTAGATAAGGCTACTGTGGTGTTTGAGGAAATGAGAACCATGGGGTTTTCTCCAAATGTTGTATCTTATAATACACTTATTTCCGGCTACTGCAATAAAGGTCTTCTGAGCTCAGCCATGAAGCTTAGAAGTGCAATGGAGAAAAATGGAGTTCCTCCAAATGCTGTTACATTTAGTATACTTATCAATGGATTCTGCAAGGATGTGAAGCTACAAGAAGCAAGTAAATTATTTGGTGAGATGAAAGGGATGAATTTATCTCCTACTACTGTCACCTACAATATTTTGATAAATGGCTACAGCAAAGTTGGCAATGGTGAGATGGGCAATAGGCTTTTTGAAGAGATGTCAAGGTTTCAAGTTAAAGCTGATATCCTTACTTACAATGCCCTGATATTGGGACTGTGCAAAGAGGGAAAGACAAAGAAAGCAGCATATCTGGTTAAAGAGCTTGATGAGAAGAGTCTTGTTCCGAATGCTTCAACCTTTTCTGCTCTAATTTATGGGCAATGTGTACTGAAGAAGTCGGAGCATGCATTTCAAATATATAAAAGCATGATAAAAAGTGGTTTTATTCCTTGCGATCAGACCTTTAGGATGTTGCTGTCCACTTTCTGCGAGAATGAGGATTATGATGGAGCAGTCCAGTTGTTGAAGGAAATGTTGAAGAGACACAAGGCTCCTGGTTTGAATAACTTATATGAGCTTTGTGCTGGACTTGGCCGGTGTGGAAAAGTTCAAACAGCTATAATGTTATGCACTGAGTTGGAAGCTCAACATCTCTTGCCAGAAGGTTTTGACAAATCCAAAGCATTTGGTTTGTTGCACAATAACGAAGATGCATTTGAATAG

Coding sequence (CDS)

ATGAGGCTTTGGCCATTTCGTACATTTTCCACTCTGCTGGGCTCTGTAGCTAGAACTTCTGCTTCTGTAAACCCTAAATTGGATGTGAGTTTAGGGAAAAGGAATTGGAATTCAGTTCCAATACCTCACCGATCAATTCCCGAACCCAGAGGACAAGACCTTGATTTTGTTAACGTGGTACATAGCCACCTGATTCATTCGGATTGGACTAAGCTTGATTGTTTGTCATTGGGTCTGACAGCATTCAGAATCAAACACATTCTTCTGAAAACCCAGAAGGACTATGTACTCTCGCTCGAGTTCTTCAATTGGGTTTCGACTCAAAATCCTTCTTCTCATACCCTTGAGACCCATTGCATAATCCTCCATATACTTTCTAAACATAGAAAATTTAAATCTGCCGAATCAATTTTGAGGAGTATCATAGGATCTTGCTCTATTGACTTTCCTTCTAAGTTGTTTGAATCTTTACTGTACTCCTACCGACTGTGTGATTCTTCCCCCCATGTTTTTGATCTGCTTTTCAAGACTTTTGCTCATTTGAAGAAGTTTAGATATGCCTCTGATACATTTTGTAAGATGAAGGATTATGGCTTTTTACCCACTGTGGAATCATGTAATGCATTTCTCAGCTCCTTGCTTAAATTCAATAGGTACCGTATTGTGTTGGCCTTTTATGGGGAAATGCGGCGTAGTCGGATTTCCCCAAATTTGTATACAGTCAACATGGTTATTTGTGCTTCCTGTAAATTGGGAAGATTAGATAAGGCTACTGTGGTGTTTGAGGAAATGAGAACCATGGGGTTTTCTCCAAATGTTGTATCTTATAATACACTTATTTCCGGCTACTGCAATAAAGGTCTTCTGAGCTCAGCCATGAAGCTTAGAAGTGCAATGGAGAAAAATGGAGTTCCTCCAAATGCTGTTACATTTAGTATACTTATCAATGGATTCTGCAAGGATGTGAAGCTACAAGAAGCAAGTAAATTATTTGGTGAGATGAAAGGGATGAATTTATCTCCTACTACTGTCACCTACAATATTTTGATAAATGGCTACAGCAAAGTTGGCAATGGTGAGATGGGCAATAGGCTTTTTGAAGAGATGTCAAGGTTTCAAGTTAAAGCTGATATCCTTACTTACAATGCCCTGATATTGGGACTGTGCAAAGAGGGAAAGACAAAGAAAGCAGCATATCTGGTTAAAGAGCTTGATGAGAAGAGTCTTGTTCCGAATGCTTCAACCTTTTCTGCTCTAATTTATGGGCAATGTGTACTGAAGAAGTCGGAGCATGCATTTCAAATATATAAAAGCATGATAAAAAGTGGTTTTATTCCTTGCGATCAGACCTTTAGGATGTTGCTGTCCACTTTCTGCGAGAATGAGGATTATGATGGAGCAGTCCAGTTGTTGAAGGAAATGTTGAAGAGACACAAGGCTCCTGGTTTGAATAACTTATATGAGCTTTGTGCTGGACTTGGCCGGTGTGGAAAAGTTCAAACAGCTATAATGTTATGCACTGAGTTGGAAGCTCAACATCTCTTGCCAGAAGGTTTTGACAAATCCAAAGCATTTGGTTTGTTGCACAATAACGAAGATGCATTTGAATAG

Protein sequence

MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVVHSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYTVNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAFE

Homology

[Close]

BLAST of CaUC02G035090.1 vs. NCBI nr
Match: XP_038900606.1 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Benincasa hispida])

HSP 1 Score: 995.3 bits (2572), Expect = 2.0e-286
Identity = 488/536 (91.04%), Postives = 511/536 (95.34%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  P+R FSTLLGSVARTSASVNPKLDVSLGKRNW S+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPYRRFSTLLGSVARTSASVNPKLDVSLGKRNWKSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDWTKLDCLSLGLTAFR+KHILLKTQ+DYVLSLEFFNWVSTQNPSS TLETHCI
Sbjct: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKTQRDYVLSLEFFNWVSTQNPSSLTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+KHRKFKSAESILRS+I SCS+DFPSKLFESLLYSYRLCDSS HVFDLLFKTFAH
Sbjct: 121 ILHILAKHRKFKSAESILRSMIESCSVDFPSKLFESLLYSYRLCDSSRHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLL FNR  I LAFYGEMRRSRISPN YT
Sbjct: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLNFNRGDIALAFYGEMRRSRISPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +NMVICASCKLGRLD+AT VFEEM TMGFSPNV SYNTLISGYCNKGLLSSAMKLRSAME
Sbjct: 241 LNMVICASCKLGRLDQATQVFEEMGTMGFSPNVASYNTLISGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFCKD KLQEASKLFGEMKGM+LSPTT+TYNILINGY+KVGNGE
Sbjct: 301 KNGVPPDVVTFNTLINGFCKDGKLQEASKLFGEMKGMSLSPTTITYNILINGYNKVGNGE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV+ELDEKSLVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKSLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YG+CV KKSE AFQIYK MIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEML+RHKA
Sbjct: 421 YGECVQKKSERAFQIYKCMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLRRHKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAFE 537
           P LNNLYELCAGLG+CGKVQTAI+LC+ELEAQHLLPEG DK KAFGLLH+N+DA +
Sbjct: 481 PYLNNLYELCAGLGQCGKVQTAILLCSELEAQHLLPEGLDKLKAFGLLHDNKDALD 536

[Close]

BLAST of CaUC02G035090.1 vs. NCBI nr
Match: XP_008464167.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Cucumis melo])

HSP 1 Score: 952.2 bits (2460), Expect = 1.9e-273
Identity = 469/535 (87.66%), Postives = 496/535 (92.71%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS+NPKLDV LGKRN NS+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  IVL+FY EMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA +VFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFC   KLQEASKLFGEMKGM+LSPTT+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML R KA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAF 536
           P +NNLYELCAGLG+CGKV+TAIMLC+ELEAQ LLPEGFDK KAFGLLH+N+DAF
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAF 535

[Close]

BLAST of CaUC02G035090.1 vs. NCBI nr
Match: XP_004140069.1 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Cucumis sativus] >KGN46601.1 hypothetical protein Csa_005178 [Cucumis sativus])

HSP 1 Score: 948.3 bits (2450), Expect = 2.8e-272
Identity = 466/535 (87.10%), Postives = 496/535 (92.71%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS++PK D+SLGKRN +S+PIPHRSIPEPRG DLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+GLTAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFC+MKDYGFLPTVESCNA+LSSLL F+R  I LAFY EMRRSRI PN YT
Sbjct: 181 LKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA VVFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRS ME
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ L+NGFCK  KLQEASKLFGEMKGM+LSPTTVTYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS F PCDQTFRMLLSTFCENEDYDGAVQLL+EML RHKA
Sbjct: 421 YGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAF 536
           P +NNLYELCAGLG+CGKV+TA+MLC+ELEAQ LLPEGFDK KAFGLL +N+DAF
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDNKDAF 535

[Close]

BLAST of CaUC02G035090.1 vs. NCBI nr
Match: KAA0060788.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 947.6 bits (2448), Expect = 4.7e-272
Identity = 468/535 (87.48%), Postives = 495/535 (92.52%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS+NPKLDV LGKRN NS+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  IVL+FY EMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA +VFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFC   KLQEASKLFGEMKGM+LSPTT+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML R KA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAF 536
           P +NNLYELCAGLG+ GKV+TAIMLC+ELEAQ LLPEGFDK KAFGLLH+N+DAF
Sbjct: 481 PDVNNLYELCAGLGQGGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAF 535

[Close]

BLAST of CaUC02G035090.1 vs. NCBI nr
Match: TYK11943.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 936.0 bits (2418), Expect = 1.4e-268
Identity = 462/528 (87.50%), Postives = 488/528 (92.42%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS+NPKLDV LGKRN NS+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  IVL+FY EMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA +VFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFC   KLQEASKLFGEMKGM+LSPTT+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML R KA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLL 529
           P +NNLYELCAGLG+CGKV+TAIMLC+ELEAQ LLPEGFDK KAF +L
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFEIL 528

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy Swiss-Prot
Match: Q9SZ10 (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 6.1e-174
Identity = 302/506 (59.68%), Postives = 384/506 (75.89%), Query Frame = 0


Query: 15  SVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVVHSHLIHSDWTKLDC 74
           S A  S S NP+L  +LG  N    PIPHR  PEP+GQDLDFVNV HSHLI SDW KL+ 
Sbjct: 18  SFAGYSGSENPRLFKTLGAAN---TPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNK 77

Query: 75  LSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSA 134
           LS  L +FR+K++LLK QKDY+LSLEFFNW  T+NP SH+LETH I+LH L+K+RKFKSA
Sbjct: 78  LSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSA 137

Query: 135 ESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKM 194
           ESILR ++ +  +D P+K+F++LLYSYR CDS+P VFD LFKTFAHLKKFR A+DTF +M
Sbjct: 138 ESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM 197

Query: 195 KDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYTVNMVICASCKLGRL 254
           KDYGFLPTVESCNA++SSLL   R  I L FY EMRR +ISPN YT+NMV+   C+ G+L
Sbjct: 198 KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL 257

Query: 255 DKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSIL 314
           DK   + ++M  +GF    VSYNTLI+G+C KGLLSSA+KL++ M K+G+ PN VTF+ L
Sbjct: 258 DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTL 317

Query: 315 INGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQV 374
           I+GFC+ +KLQEASK+FGEMK +N++P TVTYN LINGYS+ G+ EM  R +E+M    +
Sbjct: 318 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 377

Query: 375 KADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQ 434
           + DILTYNALI GLCK+ KT+KAA  VKELD+++LVPN+STFSALI GQCV K ++  F+
Sbjct: 378 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 437

Query: 435 IYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLG 494
           +YKSMI+SG  P +QTF ML+S FC NED+DGA Q+L+EM++R        ++++C GL 
Sbjct: 438 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 497

Query: 495 RCGKVQTAIMLCTELEAQHLLPEGFD 521
             GK Q    L  E+E +  L E F+
Sbjct: 498 HQGKDQLVKKLLQEMEGKKFLQESFN 520

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-63
Identity = 142/450 (31.56%), Postives = 236/450 (52.44%), Query Frame = 0


Query: 71  KLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSS-HTLETHCIILHILSKHR 130
           +L  LS   T     ++LLK+Q D  L L+F NW    NP    TL   CI LHIL+K +
Sbjct: 38  QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWA---NPHQFFTLRCKCITLHILTKFK 97

Query: 131 KFKSAESILRSIIGSCSID-FPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYAS 190
            +K+A+ +   +      D + S +F+SL  +Y LC S+  VFDL+ K+++ L     A 
Sbjct: 98  LYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 157

Query: 191 DTFCKMKDYGFLPTVESCNAFLSSLLKFNR-YRIVLAFYGEMRRSRISPNLYTVNMVICA 250
                 + +GF+P V S NA L + ++  R        + EM  S++SPN++T N++I  
Sbjct: 158 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 217

Query: 251 SCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPN 310
            C  G +D A  +F++M T G  PNVV+YNTLI GYC    +    KL  +M   G+ PN
Sbjct: 218 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 277

Query: 311 AVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFE 370
            ++++++ING C++ +++E S +  EM     S   VTYN LI GY K GN      +  
Sbjct: 278 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 337

Query: 371 EMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLK 430
           EM R  +   ++TY +LI  +CK G   +A   + ++  + L PN  T++ L+ G     
Sbjct: 338 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 397

Query: 431 KSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLY 490
               A+++ + M  +GF P   T+  L++  C     + A+ +L++M ++  +P + +  
Sbjct: 398 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 457

Query: 491 ELCAGLGRCGKVQTAIMLCTELEAQHLLPE 518
            + +G  R   V  A+ +  E+  + + P+
Sbjct: 458 TVLSGFCRSYDVDEALRVKREMVEKGIKPD 484

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.7e-63
Identity = 142/433 (32.79%), Postives = 231/433 (53.35%), Query Frame = 0


Query: 87  ILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSAESILRSIIGSCS 146
           +L+K + DY L L+FF+W  ++  S+  LE+ CI++H+    +  K A+S++ S      
Sbjct: 93  VLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLISSFWERPK 152

Query: 147 IDFPS---KLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTV 206
           ++      + F+ L+Y+Y+   S P VFD+ F+        R A   F KM +YG + +V
Sbjct: 153 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 212

Query: 207 ESCNAFLSSLLKFNRYRIVLAF--YGEMRRSRISPNLYTVNMVICASCKLGRLDKATVVF 266
           +SCN +L+ L K + Y+   A   + E     +  N+ + N+VI   C+LGR+ +A  + 
Sbjct: 213 DSCNVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 272

Query: 267 EEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSILINGFCKD 326
             M   G++P+V+SY+T+++GYC  G L    KL   M++ G+ PN+  +  +I   C+ 
Sbjct: 273 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 332

Query: 327 VKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQVKADILTY 386
            KL EA + F EM    + P TV Y  LI+G+ K G+    ++ F EM    +  D+LTY
Sbjct: 333 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 392

Query: 387 NALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQIYKSMIK 446
            A+I G C+ G   +A  L  E+  K L P++ TF+ LI G C     + AF+++  MI+
Sbjct: 393 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 452

Query: 447 SGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLGRCGKVQT 506
           +G  P   T+  L+   C+  D D A +LL EM K    P +     +  GL + G ++ 
Sbjct: 453 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 512

Query: 507 AIMLCTELEAQHL 515
           A+ L  E EA  L
Sbjct: 513 AVKLVGEFEAAGL 522

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-58
Identity = 143/463 (30.89%), Postives = 231/463 (49.89%), Query Frame = 0


Query: 57  VNVVHSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLE 116
           V V+   +    W+KL      +    +   L+ ++ D  L L +++W+   +  S +LE
Sbjct: 43  VAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLE 102

Query: 117 THCIILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFK 176
               +LH L+  +++    S L   + + S      +F ++     +C +S  + D+L  
Sbjct: 103 LTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNS-IIADMLVL 162

Query: 177 TFAHLKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISP 236
            +A+  +F    + F +   YG+  +  SC   + +LLK NR   V   Y EM R +I P
Sbjct: 163 AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQP 222

Query: 237 NLYTVNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYC---NKGLLSSAM 296
           N++T N+VI A CK G+++KA  V E+M+  G SPNVVSYNTLI GYC     G +  A 
Sbjct: 223 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 282

Query: 297 KLRSAMEKNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGY 356
            +   M +N V PN  TF+ILI+GF KD  L  + K+F EM   ++ P  ++YN LING 
Sbjct: 283 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 342

Query: 357 SKVGNGEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNA 416
              G       + ++M    V+ +++TYNALI G CK    K+A  +   +  +  VP  
Sbjct: 343 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 402

Query: 417 STFSALIYGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKE 476
             ++ LI   C L K +  F + + M + G +P   T+  L++  C N + + A +L  +
Sbjct: 403 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 462

Query: 477 MLKRHKAPGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLP 517
           +  +   P L   + L  G  R G+ + A ML  E+    L P
Sbjct: 463 LTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 2.3e-56
Identity = 131/424 (30.90%), Postives = 222/424 (52.36%), Query Frame = 0


Query: 97  LSLEFFNWVSTQN--PSSHTLETHCIILHILSKHRKFKSAESILRSIIGSCSIDFPSKLF 156
           L+L+F  WV  Q    + H ++  CI  HIL + R +  A  IL+ +  S      S +F
Sbjct: 52  LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVF 111

Query: 157 ESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLL 216
            +L+ +YRLC+S+P V+D+L + +      + + + F  M  YGF P+V +CNA L S++
Sbjct: 112 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 171

Query: 217 KFNRYRIVLAFYGEMRRSRISPNLYTVNMVICASCKLGRLDKATVVFEEMRTMGFSPNVV 276
           K      V +F  EM + +I P++ T N++I   C  G  +K++ + ++M   G++P +V
Sbjct: 172 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 231

Query: 277 SYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSILINGFCKDVKLQEASKLFGEM 336
           +YNT++  YC KG   +A++L   M+  GV  +  T+++LI+  C+  ++ +   L  +M
Sbjct: 232 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 291

Query: 337 KGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKT 396
           +   + P  VTYN LING+S  G   + ++L  EM  F +  + +T+NALI G   EG  
Sbjct: 292 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 351

Query: 397 KKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRML 456
           K+A  +   ++ K L P+  ++  L+ G C   + + A   Y  M ++G      T+  +
Sbjct: 352 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 411

Query: 457 LSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHL 516
           +   C+N   D AV LL EM K    P +     L  G  + G+ +TA  +   +    L
Sbjct: 412 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 471

Query: 517 LPEG 519
            P G
Sbjct: 472 SPNG 473

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy TrEMBL
Match: A0A1S3CKV3 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502115 PE=4 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 9.2e-274
Identity = 469/535 (87.66%), Postives = 496/535 (92.71%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS+NPKLDV LGKRN NS+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  IVL+FY EMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA +VFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFC   KLQEASKLFGEMKGM+LSPTT+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML R KA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAF 536
           P +NNLYELCAGLG+CGKV+TAIMLC+ELEAQ LLPEGFDK KAFGLLH+N+DAF
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAF 535

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy TrEMBL
Match: A0A0A0KFT3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111910 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.3e-272
Identity = 466/535 (87.10%), Postives = 496/535 (92.71%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS++PK D+SLGKRN +S+PIPHRSIPEPRG DLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+GLTAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFC+MKDYGFLPTVESCNA+LSSLL F+R  I LAFY EMRRSRI PN YT
Sbjct: 181 LKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA VVFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRS ME
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ L+NGFCK  KLQEASKLFGEMKGM+LSPTTVTYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS F PCDQTFRMLLSTFCENEDYDGAVQLL+EML RHKA
Sbjct: 421 YGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAF 536
           P +NNLYELCAGLG+CGKV+TA+MLC+ELEAQ LLPEGFDK KAFGLL +N+DAF
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDNKDAF 535

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy TrEMBL
Match: A0A5A7UZU7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00030 PE=4 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.3e-272
Identity = 468/535 (87.48%), Postives = 495/535 (92.52%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS+NPKLDV LGKRN NS+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  IVL+FY EMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA +VFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFC   KLQEASKLFGEMKGM+LSPTT+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML R KA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLLHNNEDAF 536
           P +NNLYELCAGLG+ GKV+TAIMLC+ELEAQ LLPEGFDK KAFGLLH+N+DAF
Sbjct: 481 PDVNNLYELCAGLGQGGKVKTAIMLCSELEAQRLLPEGFDKLKAFGLLHDNKDAF 535

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy TrEMBL
Match: A0A5D3CJ34 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001250 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 6.8e-269
Identity = 462/528 (87.50%), Postives = 488/528 (92.42%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV RT AS+NPKLDV LGKRN NS+PIPHRSIPEPRGQDLDFVNVV
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASINPKLDVRLGKRNRNSIPIPHRSIPEPRGQDLDFVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDW+KLDCLS+G+TAFR+KHILLKTQKDYVLSLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWSKLDCLSMGMTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+K RKFKSAESILRSII SCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILTKSRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL F+R  IVL+FY EMRR RI PN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFSRGDIVLSFYREMRRRRIYPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICA CKLGRLDKA +VFEEM TMGFSPNV SYNTLI+GYCNKGLLSSAMKLRSAME
Sbjct: 241 LNLVICAFCKLGRLDKANMVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFC   KLQEASKLFGEMKGM+LSPTT+TYNILINGYSK GN E
Sbjct: 301 KNGVPPDVVTFNTLINGFCNVGKLQEASKLFGEMKGMSLSPTTITYNILINGYSKAGNCE 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGNRLFEEMSRFQVK DILTYNALILGLCKEGKTKKAAYLV+ELDEK LVPNASTFSALI
Sbjct: 361 MGNRLFEEMSRFQVKTDILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQCV K+SE AFQIYKSMIKS FIPC+QTFRMLLSTFCENEDYDGAVQLL EML R KA
Sbjct: 421 YGQCVRKQSERAFQIYKSMIKSSFIPCNQTFRMLLSTFCENEDYDGAVQLLGEMLSRRKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFDKSKAFGLL 529
           P +NNLYELCAGLG+CGKV+TAIMLC+ELEAQ LLPEGFDK KAF +L
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAIMLCSELEAQRLLPEGFDKLKAFEIL 528

[Close]

BLAST of CaUC02G035090.1 vs. ExPASy TrEMBL
Match: A0A6J1CFK6 (pentatricopeptide repeat-containing protein At4g26680, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010981 PE=3 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 8.7e-264
Identity = 452/530 (85.28%), Postives = 483/530 (91.13%), Query Frame = 0


Query: 1   MRLWPFRTFSTLLGSVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVV 60
           MR  PFR FSTLLGSV R SAS NPK+DV+LGK+NWN  PIPHRSIPEPRGQDLD VNVV
Sbjct: 1   MRFVPFRRFSTLLGSVPRNSASANPKMDVNLGKKNWNPTPIPHRSIPEPRGQDLDVVNVV 60

Query: 61  HSHLIHSDWTKLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCI 120
           HSHLIHSDWTKLDCLSLGLTAFR+KHILLK QKDYV+SLEFFNWV+TQNPSSHTLETHCI
Sbjct: 61  HSHLIHSDWTKLDCLSLGLTAFRVKHILLKIQKDYVISLEFFNWVATQNPSSHTLETHCI 120

Query: 121 ILHILSKHRKFKSAESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180
           ILHIL+KHRKFKSAESILRS+I SCSI+FPSKLFESLLYSYR+CDSSPHVFDLLFKTFAH
Sbjct: 121 ILHILAKHRKFKSAESILRSMIESCSIEFPSKLFESLLYSYRVCDSSPHVFDLLFKTFAH 180

Query: 181 LKKFRYASDTFCKMKDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYT 240
           LKKFR ASDTFCKMKDYGFLPTVESCNAFLSSLL FNR  I LAFY EMRRSRISPN YT
Sbjct: 181 LKKFRNASDTFCKMKDYGFLPTVESCNAFLSSLLNFNRGDIALAFYREMRRSRISPNSYT 240

Query: 241 VNMVICASCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAME 300
           +N+VICASCKLGRLDKAT VFEEMR MGFSPNV SYNTL++GYCNKGLLSSAMKLR+AME
Sbjct: 241 LNLVICASCKLGRLDKATKVFEEMRIMGFSPNVASYNTLVAGYCNKGLLSSAMKLRTAME 300

Query: 301 KNGVPPNAVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGE 360
           KNGVPP+ VTF+ LINGFCKD KLQEASKLFGEMK M+LSPTTVTYN LINGYSKVGN +
Sbjct: 301 KNGVPPDVVTFNTLINGFCKDGKLQEASKLFGEMKVMSLSPTTVTYNTLINGYSKVGNSD 360

Query: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALI 420
           MGN+LFEEM RF+VK DILTYNALILGLCKEGKTKKAA+LV+ELD+ +LVPNASTFSALI
Sbjct: 361 MGNQLFEEMLRFKVKPDILTYNALILGLCKEGKTKKAAFLVRELDKMNLVPNASTFSALI 420

Query: 421 YGQCVLKKSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKA 480
           YGQC  K SE AFQIYKSMIKSGF PCDQT+ MLLSTFCENEDYDGAVQLLKEMLKRHKA
Sbjct: 421 YGQCARKNSERAFQIYKSMIKSGFSPCDQTYGMLLSTFCENEDYDGAVQLLKEMLKRHKA 480

Query: 481 PGLNNLYELCAGLGRCGKVQTAIMLCTELEAQHLLPEGFD----KSKAFG 527
           P L+ L  +C GLGRCGK+QT IMLC+ELEAQHLLPEGFD     S+AFG
Sbjct: 481 PDLDILSVVCTGLGRCGKLQTGIMLCSELEAQHLLPEGFDDKFKTSEAFG 530

[Close]

BLAST of CaUC02G035090.1 vs. TAIR 10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 612.1 bits (1577), Expect = 4.4e-175
Identity = 302/506 (59.68%), Postives = 384/506 (75.89%), Query Frame = 0


Query: 15  SVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVVHSHLIHSDWTKLDC 74
           S A  S S NP+L  +LG  N    PIPHR  PEP+GQDLDFVNV HSHLI SDW KL+ 
Sbjct: 18  SFAGYSGSENPRLFKTLGAAN---TPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNK 77

Query: 75  LSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSA 134
           LS  L +FR+K++LLK QKDY+LSLEFFNW  T+NP SH+LETH I+LH L+K+RKFKSA
Sbjct: 78  LSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSA 137

Query: 135 ESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKM 194
           ESILR ++ +  +D P+K+F++LLYSYR CDS+P VFD LFKTFAHLKKFR A+DTF +M
Sbjct: 138 ESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM 197

Query: 195 KDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYTVNMVICASCKLGRL 254
           KDYGFLPTVESCNA++SSLL   R  I L FY EMRR +ISPN YT+NMV+   C+ G+L
Sbjct: 198 KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL 257

Query: 255 DKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSIL 314
           DK   + ++M  +GF    VSYNTLI+G+C KGLLSSA+KL++ M K+G+ PN VTF+ L
Sbjct: 258 DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTL 317

Query: 315 INGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQV 374
           I+GFC+ +KLQEASK+FGEMK +N++P TVTYN LINGYS+ G+ EM  R +E+M    +
Sbjct: 318 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 377

Query: 375 KADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQ 434
           + DILTYNALI GLCK+ KT+KAA  VKELD+++LVPN+STFSALI GQCV K ++  F+
Sbjct: 378 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 437

Query: 435 IYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLG 494
           +YKSMI+SG  P +QTF ML+S FC NED+DGA Q+L+EM++R        ++++C GL 
Sbjct: 438 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 497

Query: 495 RCGKVQTAIMLCTELEAQHLLPEGFD 521
             GK Q    L  E+E +  L E F+
Sbjct: 498 HQGKDQLVKKLLQEMEGKKFLQESFN 520

[Close]

BLAST of CaUC02G035090.1 vs. TAIR 10
Match: AT4G26680.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 612.1 bits (1577), Expect = 4.4e-175
Identity = 302/506 (59.68%), Postives = 384/506 (75.89%), Query Frame = 0


Query: 15  SVARTSASVNPKLDVSLGKRNWNSVPIPHRSIPEPRGQDLDFVNVVHSHLIHSDWTKLDC 74
           S A  S S NP+L  +LG  N    PIPHR  PEP+GQDLDFVNV HSHLI SDW KL+ 
Sbjct: 18  SFAGYSGSENPRLFKTLGAAN---TPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNK 77

Query: 75  LSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSA 134
           LS  L +FR+K++LLK QKDY+LSLEFFNW  T+NP SH+LETH I+LH L+K+RKFKSA
Sbjct: 78  LSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSA 137

Query: 135 ESILRSIIGSCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKM 194
           ESILR ++ +  +D P+K+F++LLYSYR CDS+P VFD LFKTFAHLKKFR A+DTF +M
Sbjct: 138 ESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM 197

Query: 195 KDYGFLPTVESCNAFLSSLLKFNRYRIVLAFYGEMRRSRISPNLYTVNMVICASCKLGRL 254
           KDYGFLPTVESCNA++SSLL   R  I L FY EMRR +ISPN YT+NMV+   C+ G+L
Sbjct: 198 KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL 257

Query: 255 DKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSIL 314
           DK   + ++M  +GF    VSYNTLI+G+C KGLLSSA+KL++ M K+G+ PN VTF+ L
Sbjct: 258 DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTL 317

Query: 315 INGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQV 374
           I+GFC+ +KLQEASK+FGEMK +N++P TVTYN LINGYS+ G+ EM  R +E+M    +
Sbjct: 318 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 377

Query: 375 KADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQ 434
           + DILTYNALI GLCK+ KT+KAA  VKELD+++LVPN+STFSALI GQCV K ++  F+
Sbjct: 378 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 437

Query: 435 IYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLG 494
           +YKSMI+SG  P +QTF ML+S FC NED+DGA Q+L+EM++R        ++++C GL 
Sbjct: 438 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 497

Query: 495 RCGKVQTAIMLCTELEAQHLLPEGFD 521
             GK Q    L  E+E +  L E F+
Sbjct: 498 HQGKDQLVKKLLQEMEGKKFLQESFN 520

[Close]

BLAST of CaUC02G035090.1 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 245.0 bits (624), Expect = 1.4e-64
Identity = 142/450 (31.56%), Postives = 236/450 (52.44%), Query Frame = 0


Query: 71  KLDCLSLGLTAFRIKHILLKTQKDYVLSLEFFNWVSTQNPSS-HTLETHCIILHILSKHR 130
           +L  LS   T     ++LLK+Q D  L L+F NW    NP    TL   CI LHIL+K +
Sbjct: 38  QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWA---NPHQFFTLRCKCITLHILTKFK 97

Query: 131 KFKSAESILRSIIGSCSID-FPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYAS 190
            +K+A+ +   +      D + S +F+SL  +Y LC S+  VFDL+ K+++ L     A 
Sbjct: 98  LYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 157

Query: 191 DTFCKMKDYGFLPTVESCNAFLSSLLKFNR-YRIVLAFYGEMRRSRISPNLYTVNMVICA 250
                 + +GF+P V S NA L + ++  R        + EM  S++SPN++T N++I  
Sbjct: 158 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 217

Query: 251 SCKLGRLDKATVVFEEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPN 310
            C  G +D A  +F++M T G  PNVV+YNTLI GYC    +    KL  +M   G+ PN
Sbjct: 218 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 277

Query: 311 AVTFSILINGFCKDVKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFE 370
            ++++++ING C++ +++E S +  EM     S   VTYN LI GY K GN      +  
Sbjct: 278 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 337

Query: 371 EMSRFQVKADILTYNALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLK 430
           EM R  +   ++TY +LI  +CK G   +A   + ++  + L PN  T++ L+ G     
Sbjct: 338 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 397

Query: 431 KSEHAFQIYKSMIKSGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLY 490
               A+++ + M  +GF P   T+  L++  C     + A+ +L++M ++  +P + +  
Sbjct: 398 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 457

Query: 491 ELCAGLGRCGKVQTAIMLCTELEAQHLLPE 518
            + +G  R   V  A+ +  E+  + + P+
Sbjct: 458 TVLSGFCRSYDVDEALRVKREMVEKGIKPD 484

[Close]

BLAST of CaUC02G035090.1 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 4.1e-64
Identity = 142/433 (32.79%), Postives = 231/433 (53.35%), Query Frame = 0


Query: 87  ILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSAESILRSIIGSCS 146
           +L+K + DY L L+FF+W  ++  S+  LE+ CI++H+    +  K A+S++ S      
Sbjct: 93  VLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLISSFWERPK 152

Query: 147 IDFPS---KLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTV 206
           ++      + F+ L+Y+Y+   S P VFD+ F+        R A   F KM +YG + +V
Sbjct: 153 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 212

Query: 207 ESCNAFLSSLLKFNRYRIVLAF--YGEMRRSRISPNLYTVNMVICASCKLGRLDKATVVF 266
           +SCN +L+ L K + Y+   A   + E     +  N+ + N+VI   C+LGR+ +A  + 
Sbjct: 213 DSCNVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 272

Query: 267 EEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSILINGFCKD 326
             M   G++P+V+SY+T+++GYC  G L    KL   M++ G+ PN+  +  +I   C+ 
Sbjct: 273 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 332

Query: 327 VKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQVKADILTY 386
            KL EA + F EM    + P TV Y  LI+G+ K G+    ++ F EM    +  D+LTY
Sbjct: 333 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 392

Query: 387 NALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQIYKSMIK 446
            A+I G C+ G   +A  L  E+  K L P++ TF+ LI G C     + AF+++  MI+
Sbjct: 393 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 452

Query: 447 SGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLGRCGKVQT 506
           +G  P   T+  L+   C+  D D A +LL EM K    P +     +  GL + G ++ 
Sbjct: 453 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 512

Query: 507 AIMLCTELEAQHL 515
           A+ L  E EA  L
Sbjct: 513 AVKLVGEFEAAGL 522

[Close]

BLAST of CaUC02G035090.1 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 4.1e-64
Identity = 142/433 (32.79%), Postives = 231/433 (53.35%), Query Frame = 0


Query: 87  ILLKTQKDYVLSLEFFNWVSTQNPSSHTLETHCIILHILSKHRKFKSAESILRSIIGSCS 146
           +L+K + DY L L+FF+W  ++  S+  LE+ CI++H+    +  K A+S++ S      
Sbjct: 93  VLMKIKCDYRLVLDFFDWARSRRDSN--LESLCIVIHLAVASKDLKVAQSLISSFWERPK 152

Query: 147 IDFPS---KLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRYASDTFCKMKDYGFLPTV 206
           ++      + F+ L+Y+Y+   S P VFD+ F+        R A   F KM +YG + +V
Sbjct: 153 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 212

Query: 207 ESCNAFLSSLLKFNRYRIVLAF--YGEMRRSRISPNLYTVNMVICASCKLGRLDKATVVF 266
           +SCN +L+ L K + Y+   A   + E     +  N+ + N+VI   C+LGR+ +A  + 
Sbjct: 213 DSCNVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 272

Query: 267 EEMRTMGFSPNVVSYNTLISGYCNKGLLSSAMKLRSAMEKNGVPPNAVTFSILINGFCKD 326
             M   G++P+V+SY+T+++GYC  G L    KL   M++ G+ PN+  +  +I   C+ 
Sbjct: 273 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 332

Query: 327 VKLQEASKLFGEMKGMNLSPTTVTYNILINGYSKVGNGEMGNRLFEEMSRFQVKADILTY 386
            KL EA + F EM    + P TV Y  LI+G+ K G+    ++ F EM    +  D+LTY
Sbjct: 333 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 392

Query: 387 NALILGLCKEGKTKKAAYLVKELDEKSLVPNASTFSALIYGQCVLKKSEHAFQIYKSMIK 446
            A+I G C+ G   +A  L  E+  K L P++ TF+ LI G C     + AF+++  MI+
Sbjct: 393 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 452

Query: 447 SGFIPCDQTFRMLLSTFCENEDYDGAVQLLKEMLKRHKAPGLNNLYELCAGLGRCGKVQT 506
           +G  P   T+  L+   C+  D D A +LL EM K    P +     +  GL + G ++ 
Sbjct: 453 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 512

Query: 507 AIMLCTELEAQHL 515
           A+ L  E EA  L
Sbjct: 513 AVKLVGEFEAAGL 522

The following BLAST results are available for this feature:

BLAST of CaUC02G035090.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900606.1	2.0e-286	91.04	pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Benincasa ...	[more]
XP_008464167.1	1.9e-273	87.66	PREDICTED: pentatricopeptide repeat-containing protein At4g26680, mitochondrial ...	[more]
XP_004140069.1	2.8e-272	87.10	pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Cucumis sa...	[more]
KAA0060788.1	4.7e-272	87.48	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
TYK11943.1	1.4e-268	87.50	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]

BLAST of CaUC02G035090.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ10	6.1e-174	59.68	Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop...	[more]
Q9FIX3	2.0e-63	31.56	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	5.7e-63	32.79	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
O04504	1.5e-58	30.89	Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX...	[more]
Q9LVQ5	2.3e-56	30.90	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]

BLAST of CaUC02G035090.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKV3	9.2e-274	87.66	pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Cucumis ...	[more]
A0A0A0KFT3	1.3e-272	87.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111910 PE=4 SV=1	[more]
A0A5A7UZU7	2.3e-272	87.48	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CJ34	6.8e-269	87.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1CFK6	8.7e-264	85.28	pentatricopeptide repeat-containing protein At4g26680, mitochondrial isoform X1 ...	[more]

BLAST of CaUC02G035090.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26680.1	4.4e-175	59.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G26680.2	4.4e-175	59.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39710.1	1.4e-64	31.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05670.1	4.1e-64	32.79	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	4.1e-64	32.79	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 266..335 e-value: 5.5E-23 score: 83.5 coord: 336..409 e-value: 4.8E-20 score: 73.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 83..265 e-value: 5.0E-22 score: 80.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 415..530 e-value: 6.7E-13 score: 50.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 271..320 e-value: 5.9E-21 score: 74.4 coord: 377..424 e-value: 6.6E-11 score: 42.2
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 234..265 e-value: 2.2E-8 score: 33.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 344..372 e-value: 2.8E-7 score: 30.3 coord: 450..477 e-value: 0.015 score: 15.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 239..273 e-value: 2.5E-8 score: 31.6 coord: 380..413 e-value: 3.5E-7 score: 28.0 coord: 450..477 e-value: 2.9E-4 score: 18.8 coord: 309..342 e-value: 9.3E-6 score: 23.5 coord: 415..446 e-value: 9.4E-5 score: 20.3 coord: 274..308 e-value: 9.4E-8 score: 29.8 coord: 205..237 e-value: 0.0012 score: 16.9 coord: 344..377 e-value: 4.7E-7 score: 27.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 202..236 score: 8.736214
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 237..271 score: 11.849223
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 377..411 score: 11.41077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 307..341 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 10.928473
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 10.413293
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..306 score: 13.044004
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 447..481 score: 9.174665
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 1..533
None	No IPR available	PANTHER	PTHR47932:SF32	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..533

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC02G035090	CaUC02G035090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC02G035090.1-exon	CaUC02G035090.1-exon-Ciama_Chr02:13688365..13690282	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC02G035090.1-cds	CaUC02G035090.1-cds-Ciama_Chr02:13688365..13689975	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC02G035090.1-five_prime_utr	CaUC02G035090.1-five_prime_utr-Ciama_Chr02:13689976..13690282	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC02G035090.1	CaUC02G035090.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding