CaUC01G001110.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC01G001110.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ribosomal protein S9
Location	Ciama_Chr01: 926780 .. 934790 (-)
Sequence length	1194
RNA-Seq Expression	CaUC01G001110.1
Synteny	CaUC01G001110.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTACTCGCCTTGATTTCTACTAAACCACCAGCTCAAACTCCTAGTTTTCATCTCCTTCCCCGATTATTCTCCACCAATAACGATGGAAGTAATAACAATAGGAACAGTGGAAGCAGAGACCAACGGACGAGCAATGTCTGGAAAATTTCACAGGAAAACGACGGAAATTTCGACCAGTTGTTCACTCAGGAAGCTGACAACCTTGACGGCATTGCGGATGACGACTCTGCTCCGAGAAACGAGGATTCGTGGGTGCAGTCGAAGGGCGGGGATCAGGGTGCCGAAGGGGAGATTTTTGCAAGCGTGGAGAAGGAAGTTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCATGGAGCCTGGTAGAGGAAGAAAAGAGCGATGTCTTCAACATTGAGGAGGATGCAGTTGAAATTGGTAAATCCAGAGATGAGATTGAGGGAGTGGATACTGTAAGCAGTGAGGATGCTAGGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAGTTTTTCTCCACCTAGCTTGCGAAGACTGCATTTTAAGTTCAACAAACTAATGCATTTGATTGAGATTCTATTTCTGGGTATGGGTATGTATGTATTGGTTGAGGATTCTGTTTCGTTAAATGTTGGTGTCTTCCAGATTATTTGATTCTATGATCCAGGCAATTCATAATAATGCTGTTACTCGTAGCTTTTGCGTTTAGCTTGAGAACGGCAAAGATAGAGGGTTGAGCCATTGACCTTTTACTTTTTTTTTTCTCCCTCCTGTGTAGTGGTTTAAAGGATGCCATTTGTTAATTTTATTGGTTCGTAACTCTTCTGTGATGTATATTAGCTGATATGCCCCTTGCGGTGTTTAATATTGTAAACACAAGGTTTTTCAGATTTCTAAATTTATAGTTGTGTATTGGATTGGAAACCTGAAGAAGAGAATGCAGCCCATTTAACCAAATGACTTTAGACGTTTACTGAAATATCAAGTGGATGATTCACTAAGATTTTATGGAACTATGCTATTAGCGCTCTTGTTCGGGTCTTTGGAAGGAGAACCGTTCCAACTTTTGAAGACAAGAAGGTTCCTTCTGATTCTGTTTACAATAGTGTACAACTCGCCTCTAGTCATAGGAAATTCTTTTGTGACTTCACTACTCATTTACGATCCTCTGGGATTGAAAAGCTATTATTCCCTAGTTTATGGAAAGGGGTTTTCTCAATCCCTTGTCTTAGGTTGAGCTATCTGTTTTCCTTTTCCCCTTTCTATATATCTCTGTTTCTCATCTGAAAAGAAAGTAAAATGAAACAAAAATAGTGAGACATACTGTGGCATAAGGTGGTGCCAAATGTCCACCTTGAAACAGGATTTTGGATGGTGTAAAAATCAAAAGAAATTTGGGAGACGTAGAAGTTTTTGATGTAACATTTTGAAATTAAAAGATACTTTTGTAAAGTATTTTTCAATCAAAATTAGTAATGGTGCATGTTTGAGACAAAAGGCCATAGTGAGGTGGGTTAAAAAAGGTGGGTGACTTTGTACCACTTTCTTTCACAAACTTTCTCTTTCATTGAATTGCAAGCTTGCGGAGAATAAGGCTGCCATTACCTCCCTTGAGGTTGAGAATGGTCAGGTGGTGGATGGGGATGAAGTAGTTGAAGAGGGCATCTTATCTTTTTTAAGGTTATGCTTAGGAGTGCTTTTGGTATGGTTAAAAGCATGTTCCTTCCAAATTTGTCTTGTCTGTGAAAAGCACTCATAATATTTTTGGCAAAAATGCTTGACCAAGAAATACTTTCAATAGTTGAAAATCAAATGCAAAAGTGATTTGTCATCAATAACTTTATTAGAAGGTTTATATTGATTACACATTTTATTAGGGTCGGATGCCTCTTTCTCTATGGAGGAGATTAGGAAGGTGGTCTTTAGTCTTGAGGGGGGTGATGCAGTAGACCTTGATGGTTTCATTATGGCATTCTTTCAAGAGAATTGAGAGCTCATCAAGGAAGATATAGATGAGGTTTTAAGTGAGTTTCACAAGTGTGGAATCATTACTTCGTCCTTGAATGAAACCTGCGTTATCCCTAAAAAGGCGATTGCATATAGAGCTGAGGATGTTACACTTGTTAGTCTTATCACCAACTTATGTAAGGTAATTGGTGAGGTGTTTCTTGATAGATTTAGATGGTCCTCCATGACAAAGTTTCTGAGTGCTTTTATTATTAGGTTGACAGATTATCGATAAAATCCTTATTGTCAATGAGGCAATTGAAAAGTACAAGGCTTGTACGTAGGAAGGGGCTATCTTCAAAATAAATTTTAAGAAACCTTATGTTCACGTAGATTGAGATTTTCTAGACAAATTCTTGTGGTACAAAGGGTGATATTGGGTTTAAGTGAAGATTTTGGATTTGAAACTACAGCAAATCAGTTAGTTTTGTTGTTTTGGTCAATGGTCAACTTAGGAGTAGGTCATCCTCGGTGTCTAGGAGTAAGGCAAGTTAATGCTCTCTCTCCCTTCCTCTTTCATATTATAGTCAATGTTTTTAGCAGGTCAGTGGCCATTGGGATGGAATGGACAAGGATGCCATCTTTTGGGTGGGTCGGAAAGGATTGATTCTATCTTCAATCTGGTGTTGACATGATATTCTATTATGGCAGTATTTGAACTTATTTCACGCTTCAAGTTTATTAGGGAAAAAGTTTGGAAGTGGGAATTAATTGTGATTCAACTAAGTTGGTTAGATCAAGATGGGCATTTATTGTAGTTTGTTAGGTTTTCAATATGCCTATCATCTATTTTTAGCTTCCTCTTATGTGTATTCCACATCCTGTTTGTCGTTTTGGAATTCATTAGTTGAAAAGGTCTAGAGACCAAAAGTGTAAAAAGGCTTTCTTCTCTAAGGGTGATAAGTTGACTCTTATTAGTAGTATGTTGAGCAATTCCTATCAAATTCCGATCTTTGTTTACAATTTCTTCTATCAGTAGTTGTAGGTTGGATAAAGACCGTAAGGATTCTATATGGGAGAGTCTCATCAAGGAGGGAAGGGTTCCCACTTGGTTAGAAAGGCGGTTGTTCCAAGACATTCAAGTTGGGTAGATTAGGTATAGGTAATCTTCGCTCACAGTGAAGTTCTTTCTAGCTAGGTTGTTAGGATATTATCCTTTGCAGCATAAGGGCCACTGTATGCTAGATACCTCACTAACATGTGAATATGCTCCTTTGGGGACGAAAACAGAGAGAAGTAAAAAAGAAACATTTGGTAATTTGCCGTAGTAGAATTGTAGCAAACCATTCACAACTAAGAAAAAACTCATGTGAGAGAGCTCATTTATATGCTACAATGGCCAACCCTAACCAAAGTGAAAGATTGTTGAATTGTGACCCTTGGCCTAGTTGACGTGTCTTGTGTTCAACTTGTATTATTGTCTATGTGTCTCTTCTTCTTAGATTATGAGTAAATATGAGGCTCATCCTTCTAACTGGGTTTCAATTCCTAGGCTAAAGGTACTTGTAGACCCTTGAAAGACATCTCCTTTAGTTTTAATTCATTTTTAGGCTTAGTTTGGGGTTGCTGTAGCTTTTCAAATAATTGCTGGTAACTCTGCTTTTAGAAAAATTAGTTGTGAGAAGAAGTAAAATAGTGTTTGGTAAAGTTTAATTTTAAATTAAAAAAACTTGTTATGATGTTTAGTAAATTAATACTAAATTTGTGTAATATAGGTATATGATGAAAATGCAGATTATCATTTCAATTATTTTTTATATTCATATTTAATTTTTAATTATTTGAAAATATATATGATTTGCAACTAATATTGTTTAATCTATTATTTTTTTTTTTAATAAAAGATTTCTTTAATTATTATAAGAAATTGAACCAATTAAAAATTGGAATAAATGAGAGATAATAAACTAATGGAATGATAAATTTGAGATGGGTAAGGAAAGATACCAAATTTTTAGGAAAGCTAGAATCTAAAAGCTCCATCAAATAGCTTTAGCACGTTAGAACAAATTTAAAAGTGATTTTGTGTAGATTAATAAATAAGTTGTTTTACCAAACAACCAAAGCGGTTAAGATTCTCATATAATCAATTTTTACGCTTGCAAAAGCAATCCCAAACGGGGCCTTAAACTAATAGTTTGGATATTCTTTTTTGGGGAAGATGGTTGGTACGGAAATTCTAATTTTGTGTTCTTTTCCCTGGTTACTGTTCCCCATCTTCTTTGAAATCTACTCCTGTAGTTCATGTCCTTCCTTTTACAGGAGATGTTGTTTTCTTTAACTTTGGTTTTGTTTCCCCATTTCAATTTCTCCTTTTCATTTCCTATTACTAGGCTCATGCTTTCATCCTGGCTCTAGGGATGCACTCTTTTGAAGCCCAACTTCAACCCTTCAGGTGGGTTTTTCTTCTAGTTATATATTTTCCCTCTCGTGTGATTTTCCCAGCCAACCCCTTTCTGTTTTTCTATGGAGGTGAGGACCCCAAATAGGTTAGATCTTTTGCCTGTCTGCTCATGGAGGTGAGGATCCCAAGTTGTATATCCTTCCACTTCTCTGTGAAATTATGATTTCTTTCATTAAAAAGGAAAAGTAATTGAGAAAAATTCCGTGGAAGGATTCTTGGGTAAACTATCAGCCTCTAACTCTCCGCTTCCCAAGAATTAAGAGCTAGCAATTCAGAAAAACGTACTGGTGGTTGATGCAAAGTCCTAGGAAGTATATGATAGAAGAGGTTTAAAAGAAAAAGAACTGACTATTTTGGTATGTTATGAAGATCTCGTTCTAGAAGTAAAATGAAAAGGTGCTTGAATTTGGAGAGTTGGTTCTTTTTCAGTTAAATCATTGTTTAATGAGATTGGTGGAGTGACTTTCTTACGGAAATCCCTTTGTTTCAGCTCTATGTAGGTTAAATAGTCCAGAAAATGTAAATGTTGATTCTTGGTTGGTTTTTCTCGGAAGTTCCGCTGCAGCTACAAAATTCCAAGAAAATGTCCAAGAAATCCTAGTTTCTGTCCACCTTGTTTTAATGCTGGAGAAGATCACCTACCCTTTCATTATTGTTATGCAGGCAATTATGGGACAGAAATTTCAGGGCTGAGTGTTATGGGTCGATATTGTTAAGTTTTTGATTTGAGAAGTACGTCTTATTCAGGCTGGTTTTCATGGACAAAAGTACCCTTTGGGAGGAAATCATTAATTCAGTGAAAGTTTATGTGGCTTCTCTAGAGTGCTCTATCCATGGTGCTTCATAGCTACTCATTTTCTTAGATTAATTCTTCTTGGGATGCTTTCTTTTTTGTACTTTTTCAGTTTATAGTTTGCTTGGTTTTGGTTTTAGAGGTTTTTTCTTGATATGTTCTTTACTATTTCTAGTTTGTAGCTTTCCAAAAAATCCATCCAAAATTTGAGTTTCCTGTCAAAGAATAGAAAAAAAAATAATAATAAAATGAAATGGTCATAGTTATGTTACTTGGCCGGCAGCATGACACCATTTGTGTGGATGAGTTTGCTCTCTGCTTCTATTCTTACTGATTATCAACTATCTTTGTTTGCTAAGGATGTCTATTTTTAATATGGGAAAATAGTTTACTATTGACTTTTAACCATCCTATTTGAGTTCATTGTGGAAAATGGGAGAAGAATACAATTTTGGGAAGATAAGTGGAGCGAATCAGTGACCTTAGCTCTAAGATTGCTGGATATTTATGCTATTTCCATTAAAAAACAGGTTTTCATTGTCTACTGTTGGAACGGATACTACAAATGTGTGACTTGGGGATTAGGAGTCGACTCTTCGATAAAGAGATGGGAAGCTTGATCCACAACGTTTTTTTTTAACTAGAAACAAAATTTTCATTGATAAATAAAAAGGAAGAAAAATGTTCAAGGATACAACTCAAAGCGAGAAAAAAGAAAGAAAAGAAAAGAAAAGAAACAAAATGCTGGCTACAAGAGATAAGAACAGCAATACAAAATGAGCAATGAGAACTATGAAGAACAAGTAAAAAAAGAACTATTCTTTTTGTTTAATAACTCGGTTGAATTTGTTGACGTTTAGGAATATGGATCATGGATGCGTTTCTGTAACATTTCACATTTTTTTTAATCAATTATGTTATTCATTTAATATGTCAACTGCAGGTCCTAATCGAGTATTCGGAGATCTTATTGCTGCATCAGGAATCACGGATGACATGATAGACAGTTTGATTGCTTTGAAAGATTTGGAAGGGGTTGAGGGGTTGCCCCCCCTAAGTGAAATAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAGCGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGGTAGATGACAAAGGAAGAGCATATGGCACAGGAAGAAGGAAATGCAGCATTGCTCGTGTATGGATTCAGCCAGGAGATGGGAAGTTCGTAGTGAATGATAAAGAATTTGATGTCTATTTTCCAATGCTCGATAGTCGGGCTGCTCTTCTTCGACCTTTCTCTGAGACCAAAACATTAGGCCTTTGGGATGTCAAATGTACTGTTAAAGGAGGTGGTACAACGGGTAAGCTTAAGTTCTAAATAACATTTAACACTTCTTGTTACATCTTCATATTCAGTTATGTCTGTTCTTAAATTGTGTTTTTATGGTTTTTTTTTTCTGCTTGCTGTAGTCCTTTTTCTTGTCACTATTTTGCATTTGTGATTATTTCTTGTCACTAGTTCTTTGGCATTGAGTGGGTTAACACCTCTTATTGCCTTTCTAATTCTGTGTACTTATCTCTCTTTAATGAAAAGCTCTCTTGAAATTTTTTTTTCTGCAATTACTTTACAACTTATCAGTCGTTGTATAGTGTTTCATTTCATCGCACGTAATGAACAAAAACAAATCTTTATTAGACTTCAGTCTCTGCTTAAGTTCGTTTCCATGGAATGGTGTACAATGCAAATCTTCTTTGATTTATGTTCTACAACCATAAAAGTTCAAATACACTTGAGCTTCATCATAGAACTGCTTAATTTCGAACTTGGGACTATCCTGGTCTTATGATACCCCTTCCCCTCTCTCCCAGACCTGAGTAGCCCTGTTCACAAAAGAAACCCTCTTTTTTACTCCCATTCAACAAGTTCCCTGTTGTTCACATCACAACTCTCAAGCAGGTCTTTTATGACTAATTCACTATCTAACCACTGCCTCCTTTAACCAGTTTTCATTAATACACACCTTTAATATTGGCATCTGATCATCTTATCGATTTACTTTACATGATATGACAATTAAATCTGGGTTTGTCTTTTGAATTATGGAAGTCGATAACAGATGATACAGTATCGTAATAACTTCTTTTATCATCATCATCGTCATATAAGATCTATTACTGCCAGCTCCTCAGTCTAATGGGTGGATGTAAACTTTTATGCTTTTGACTTTATTAGAAAGGATGCATTAAAGTTTCGACTCATTGCTTATATGTTTGTGCTTCTTCTGGAGTTTTATCCTGTTTCTAAGTCATTGAAAGTCAACTATTTTTGTTTCAATCTGTTCCAAATACAAATTTCCTTCTCTCTACCCTTTTTGTATGTGTTTTCAAGTGAGTGAAAGTTCTGAACCTTCTGGGTTACAGGCCAAGTTGGAGCTATTCAGTTGGGTATCAGCAGAGCCTTGCAGAATTGGGAGCCCGATCTCCGTCCTCCATTGCGAGCATGTAAGATAAAACGATTACACTTTCTTGGTCAGCTATGATTAGAATGATACATAAGAAGCATTTATTTGTTCTTTTTTTTATTGATCAAATTTTCCTTTTCTATTCGGATGGTAGCTGGTTTCTTGACTCGAGATGCACGTGTTGTTGAAAGAAAGAAGCCAGGAAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAACGTTAG

mRNA sequence

ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTACTCGCCTTGATTTCTACTAAACCACCAGCTCAAACTCCTAGTTTTCATCTCCTTCCCCGATTATTCTCCACCAATAACGATGGAAGTAATAACAATAGGAACAGTGGAAGCAGAGACCAACGGACGAGCAATGTCTGGAAAATTTCACAGGAAAACGACGGAAATTTCGACCAGTTGTTCACTCAGGAAGCTGACAACCTTGACGGCATTGCGGATGACGACTCTGCTCCGAGAAACGAGGATTCGTGGGTGCAGTCGAAGGGCGGGGATCAGGGTGCCGAAGGGGAGATTTTTGCAAGCGTGGAGAAGGAAGTTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCATGGAGCCTGGTAGAGGAAGAAAAGAGCGATGTCTTCAACATTGAGGAGGATGCAGTTGAAATTGGTAAATCCAGAGATGAGATTGAGGGAGTGGATACTGTAAGCAGTGAGGATGCTAGGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGTCCTAATCGAGTATTCGGAGATCTTATTGCTGCATCAGGAATCACGGATGACATGATAGACAGTTTGATTGCTTTGAAAGATTTGGAAGGGGTTGAGGGGTTGCCCCCCCTAAGTGAAATAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAGCGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGGTAGATGACAAAGGAAGAGCATATGGCACAGGAAGAAGGAAATGCAGCATTGCTCGTGTATGGATTCAGCCAGGAGATGGGAAGTTCGTAGTGAATGATAAAGAATTTGATGTCTATTTTCCAATGCTCGATAGTCGGGCTGCTCTTCTTCGACCTTTCTCTGAGACCAAAACATTAGGCCTTTGGGATGTCAAATGTACTGTTAAAGGAGGTGGTACAACGGGCCAAGTTGGAGCTATTCAGTTGGGTATCAGCAGAGCCTTGCAGAATTGGGAGCCCGATCTCCGTCCTCCATTGCGAGCATCTGGTTTCTTGACTCGAGATGCACGTGTTGTTGAAAGAAAGAAGCCAGGAAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAACGTTAG

Coding sequence (CDS)

ATGCTTTCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTACTCGCCTTGATTTCTACTAAACCACCAGCTCAAACTCCTAGTTTTCATCTCCTTCCCCGATTATTCTCCACCAATAACGATGGAAGTAATAACAATAGGAACAGTGGAAGCAGAGACCAACGGACGAGCAATGTCTGGAAAATTTCACAGGAAAACGACGGAAATTTCGACCAGTTGTTCACTCAGGAAGCTGACAACCTTGACGGCATTGCGGATGACGACTCTGCTCCGAGAAACGAGGATTCGTGGGTGCAGTCGAAGGGCGGGGATCAGGGTGCCGAAGGGGAGATTTTTGCAAGCGTGGAGAAGGAAGTTCGAGGAAATAAAGATGGCGATGGTGATAATGAATGGGTTACGGCGAAAAAATTCGAGCCATGGAGCCTGGTAGAGGAAGAAAAGAGCGATGTCTTCAACATTGAGGAGGATGCAGTTGAAATTGGTAAATCCAGAGATGAGATTGAGGGAGTGGATACTGTAAGCAGTGAGGATGCTAGGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGTCCTAATCGAGTATTCGGAGATCTTATTGCTGCATCAGGAATCACGGATGACATGATAGACAGTTTGATTGCTTTGAAAGATTTGGAAGGGGTTGAGGGGTTGCCCCCCCTAAGTGAAATAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAGCGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGGTAGATGACAAAGGAAGAGCATATGGCACAGGAAGAAGGAAATGCAGCATTGCTCGTGTATGGATTCAGCCAGGAGATGGGAAGTTCGTAGTGAATGATAAAGAATTTGATGTCTATTTTCCAATGCTCGATAGTCGGGCTGCTCTTCTTCGACCTTTCTCTGAGACCAAAACATTAGGCCTTTGGGATGTCAAATGTACTGTTAAAGGAGGTGGTACAACGGGCCAAGTTGGAGCTATTCAGTTGGGTATCAGCAGAGCCTTGCAGAATTGGGAGCCCGATCTCCGTCCTCCATTGCGAGCATCTGGTTTCTTGACTCGAGATGCACGTGTTGTTGAAAGAAAGAAGCCAGGAAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAACGTTAG

Protein sequence

MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVWKISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVRGNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARKLEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR

Homology

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BLAST of CaUC01G001110.1 vs. NCBI nr
Match: XP_038874636.1 (30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 721.1 bits (1860), Expect = 5.3e-204
Identity = 370/397 (93.20%), Postives = 384/397 (96.73%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQTPSFHLL RLFST+N+GSNNNRNSGSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLGLISTKPPAQTPSFHLLLRLFSTDNNGSNNNRNSGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           KISQENDGNFDQLFTQEAD+LD IA+DDSAP N+DSWV SKG DQGAEG+IFAS+E+EVR
Sbjct: 61  KISQENDGNFDQLFTQEADDLDSIAEDDSAPGNDDSWVSSKGEDQGAEGDIFASMEQEVR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEE AVEIG+S DE + VD+ SSEDARK
Sbjct: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEVAVEIGESSDETKEVDSKSSEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLSEIEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSEIEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEE+AKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKF+VNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEIAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFIVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
           LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR
Sbjct: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. NCBI nr
Match: XP_022972996.1 (28S ribosomal protein S9, mitochondrial [Cucurbita maxima])

HSP 1 Score: 699.9 bits (1805), Expect = 1.3e-197
Identity = 354/397 (89.17%), Postives = 378/397 (95.21%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ P FH+LPR FS++N+GSNNN+N GSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHVLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+S+E+D NFDQLFTQEADNLDGIA+DDSAP N+D+WV+S+ GDQGA G+IFA VEKE+R
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDTWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           G+KDGDG NEWVTA K EPWSLVEEEKSDVFNI+EDAVEIGKSRDEI+ VD+ SSEDARK
Sbjct: 121 GDKDGDGANEWVTATKLEPWSLVEEEKSDVFNIQEDAVEIGKSRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLS +EDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
            RPPLRASGFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 FRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. NCBI nr
Match: XP_022922373.1 (28S ribosomal protein S9, mitochondrial [Cucurbita moschata])

HSP 1 Score: 699.1 bits (1803), Expect = 2.2e-197
Identity = 355/397 (89.42%), Postives = 376/397 (94.71%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ+P FHLLPR FS++N+GSNNN+N GSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+S+E+D NFDQLFTQEADNLDGIA+DDSAP N DSWV+S+ GDQGA G+IFA VEKE+R
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANADSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKD DG NEWV A KFEPWSLVEEEKSDVFNI+EDAVEIGK RDEI+ VD+ SSEDARK
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLS +EDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
            RPPLRASGFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 FRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. NCBI nr
Match: KAG6579377.1 (30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 698.7 bits (1802), Expect = 2.8e-197
Identity = 354/397 (89.17%), Postives = 376/397 (94.71%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ+P FHLLPR FS++N+GSNNN+N GSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+S+E+D NFDQLFTQEADNLDGIA+DDSAP N+DSWV+S+ GDQGA G+IFA VEKE+R
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKD DG NEWV A KFEPW LVEEEKSDVFNI+EDAVEIGK RDEI+ VD+ SSEDARK
Sbjct: 121 GNKDDDGANEWVAATKFEPWGLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLS +EDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
            RPPLRASGFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 FRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. NCBI nr
Match: XP_023550446.1 (28S ribosomal protein S9, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697.6 bits (1799), Expect = 6.3e-197
Identity = 353/397 (88.92%), Postives = 376/397 (94.71%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ P FHLLPR FS++N+GSNNN+N GSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+S+E+D NFDQLFTQEADNLDGIA+DDSAP N+DSWV+S+ GDQGA G+IFA VEKE+R
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKD DG NEWV A KFEPWSLVEEEKSD+FNI+EDAVEIGK RDEI+ VD+ S+EDARK
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDLFNIQEDAVEIGKPRDEIKEVDSESNEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLS +EDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
            RPPLRASGFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 FRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy Swiss-Prot
Match: Q8L6Z4 (30S ribosomal protein S9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS9M PE=1 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.7e-104
Identity = 231/440 (52.50%), Postives = 282/440 (64.09%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRL  + S+ R + L+S+K  +Q  S  + P   STN+ G   N +   R+ R    W
Sbjct: 1   MLSRLFLRHSNLRFVTLVSSKSNSQIFSSFIRP--LSTNSSGGGGNGDGNGRN-RNDVPW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGG------------DQGAE 120
             +  ND       + ++    G+A     P  E  W +                D G E
Sbjct: 61  SFTGVNDDKSGPFSSDDSFGSSGVA-GSGLPGGEGKWPEEPKRWNIKEEEEKVVFDTGGE 120

Query: 121 GEIFASVEKEVRGNK------------------DGDGD-------------NEWVTAKKF 180
                   +E RGN+                   G GD             NEW  +K  
Sbjct: 121 VGQGIETSRERRGNEWEETKRWDMKEGEEKVVFGGGGDEVDGFGIRGEVKSNEWDVSK-- 180

Query: 181 EPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARKLEKEEQELTAILKGPNR 240
            PW+L EEE+  VF+   +     ++  E+   + V  E    +EKEE+EL  ++KGP+R
Sbjct: 181 -PWNLKEEEEGVVFDTGGEVPFSFENSLEMAEEERVKKE---LIEKEEKELLEVIKGPDR 240

Query: 241 VFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYEKNTRKSSRAEIERQKQE 300
            FGDLIA SGITD+M+DSLIALKD +GVEGLPPL+EIE++R EK+++KSSRAEIE Q QE
Sbjct: 241 AFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSSRAEIELQMQE 300

Query: 301 EVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAALLR 360
           ++AKARVRQVD+ GRAYGTGRRKCSIARVWIQPG+GKF VN+KEFDVYFPMLD RAALLR
Sbjct: 301 DIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLR 360

Query: 361 PFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRDARV 398
           P +ETKTLG WD+KCTVKGGGTTGQVGAIQLGISRALQNWEPD+R  LRA+GFLTRD+RV
Sbjct: 361 PLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRV 420

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy Swiss-Prot
Match: A8I7Z9 (30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rpsI PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-36
Identity = 76/138 (55.07%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 260 AKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAALLRPF 319
           A   V+++D  GRAY TG+RK ++ARVW++PG GK +VND+  +VYF     R  + +PF
Sbjct: 17  APVHVQKLDKFGRAYATGKRKDAVARVWVRPGTGKIIVNDRPVEVYFARPVLRLIINQPF 76

Query: 320 SETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRDARVVE 379
           +     G +DV CTV GGG +GQ GA++ GISRAL  +EP+LR PL+  GFLTRD+RVVE
Sbjct: 77  AAAAREGAYDVVCTVSGGGLSGQAGALRHGISRALTFYEPELRGPLKKGGFLTRDSRVVE 136

Query: 380 RKKPGKAKARKSFQWVKR 398
           RKK G+AKAR+SFQ+ KR
Sbjct: 137 RKKYGRAKARRSFQFSKR 154

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy Swiss-Prot
Match: A9IVX6 (30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=rpsI PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.6e-36
Identity = 78/144 (54.17%), Postives = 102/144 (70.83%), Query Frame = 0


Query: 254 QKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRA 313
           +  E V    V+++D +GRAY TG+RK ++ARVWI+PG GK ++N+KEFD YF     R 
Sbjct: 18  EPHENVVPVHVQKLDSQGRAYATGKRKDAVARVWIKPGSGKIIINNKEFDKYFARPVLRM 77

Query: 314 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTR 373
            L +P   T     +D+  TV GGG +GQ GAI+ GIS+AL  +EP+LRP L+  GFLTR
Sbjct: 78  ILRQPIVATNRDTQFDIVATVAGGGLSGQAGAIRHGISKALTYYEPELRPILKKGGFLTR 137

Query: 374 DARVVERKKPGKAKARKSFQWVKR 398
           D+RVVERKK GKAKAR+SFQ+ KR
Sbjct: 138 DSRVVERKKYGKAKARRSFQFSKR 161

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy Swiss-Prot
Match: A7INH2 (30S ribosomal protein S9 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=rpsI PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.4e-36
Identity = 73/138 (52.90%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 260 AKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAALLRPF 319
           A   V+++D  GRAY TG+RK ++ARVW++PG GK  +ND++ +VYF     R  + +PF
Sbjct: 23  APVHVQKLDKYGRAYATGKRKNAVARVWVRPGTGKVTINDRDIEVYFARPVLRLMINQPF 82

Query: 320 SETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRDARVVE 379
                 G +DV CTV GGG +GQ GA++ GIS+AL  +EP+LR PL+  GF+TRD+RVVE
Sbjct: 83  QAAAREGQYDVVCTVSGGGLSGQAGAVRHGISKALTYYEPELRSPLKKGGFITRDSRVVE 142

Query: 380 RKKPGKAKARKSFQWVKR 398
           RKK G+AKAR+SFQ+ KR
Sbjct: 143 RKKYGRAKARRSFQFSKR 160

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy Swiss-Prot
Match: B2S535 (30S ribosomal protein S9 OS=Brucella abortus (strain S19) OX=430066 GN=rpsI PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-35
Identity = 76/143 (53.15%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 255 KQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAA 314
           K E  A   V+++D +GRAY TG+RK ++ARVW++PG GK  VNDKEF+ YF     +  
Sbjct: 16  KTEAAAPVHVQKLDAQGRAYATGKRKDAVARVWVKPGTGKITVNDKEFEKYFARPVLQMI 75

Query: 315 LLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRD 374
           L +P   +   G +D+  TV GGG +GQ GA++ GIS+AL ++EP LR  L+  GFLTRD
Sbjct: 76  LQQPIVASNRAGQFDIVATVAGGGLSGQAGAVRHGISKALTDYEPGLRTVLKKGGFLTRD 135

Query: 375 ARVVERKKPGKAKARKSFQWVKR 398
           +RVVERKK GKAKAR+SFQ+ KR
Sbjct: 136 SRVVERKKYGKAKARRSFQFSKR 158

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy TrEMBL
Match: A0A6J1I7H1 (28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471519 PE=3 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 6.1e-198
Identity = 354/397 (89.17%), Postives = 378/397 (95.21%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ P FH+LPR FS++N+GSNNN+N GSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHVLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+S+E+D NFDQLFTQEADNLDGIA+DDSAP N+D+WV+S+ GDQGA G+IFA VEKE+R
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDTWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           G+KDGDG NEWVTA K EPWSLVEEEKSDVFNI+EDAVEIGKSRDEI+ VD+ SSEDARK
Sbjct: 121 GDKDGDGANEWVTATKLEPWSLVEEEKSDVFNIQEDAVEIGKSRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLS +EDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
            RPPLRASGFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 FRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy TrEMBL
Match: A0A6J1E6E6 (28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430383 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.0e-197
Identity = 355/397 (89.42%), Postives = 376/397 (94.71%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHFRLL LISTKPPAQ+P FHLLPR FS++N+GSNNN+N GSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+S+E+D NFDQLFTQEADNLDGIA+DDSAP N DSWV+S+ GDQGA G+IFA VEKE+R
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANADSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKD DG NEWV A KFEPWSLVEEEKSDVFNI+EDAVEIGK RDEI+ VD+ SSEDARK
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTAILKGPNR FGDLIAASGITDDM+DSLIALKDLEGVEGLPPLS +EDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
            RPPLRASGFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 FRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy TrEMBL
Match: A0A6J1DZS9 (28S ribosomal protein S9, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026113 PE=3 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 2.8e-195
Identity = 350/397 (88.16%), Postives = 378/397 (95.21%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSHF+LLALISTKPP Q+PSF LLPR FSTN++GSNNN++SGSRDQ TSNVW
Sbjct: 1   MLSRLLPKPSHFKLLALISTKPPPQSPSFRLLPRFFSTNDNGSNNNKSSGSRDQPTSNVW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           K+SQENDGNFDQLFTQ+ +NLDGIA+DDSA  ++DSWV+SK GD+GAEG++FAS+EKE++
Sbjct: 61  KLSQENDGNFDQLFTQDVENLDGIAEDDSAAVDDDSWVRSKDGDRGAEGDVFASMEKEIQ 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKDG GDNEWVTAKK+EPWSLVEEEKSDVFNIEE  VEIG+SRDE   VD  SSEDA+K
Sbjct: 121 GNKDGAGDNEWVTAKKYEPWSLVEEEKSDVFNIEEYTVEIGESRDESREVDGGSSEDAKK 180

Query: 181 LEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYE 240
           LEKEEQELTA+LKGPN  FGDLIAASGITDDM+DSLIALKDLEGVEGLPPL+EIEDMRYE
Sbjct: 181 LEKEEQELTAVLKGPNCTFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLTEIEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKF+VNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFIVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360
           EFDVYFPMLDSRAALLRPFSETKTLGLWDV CTVKGGGT+GQVGA+QLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVTCTVKGGGTSGQVGAVQLGISRALQNWEPD 360

Query: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
           LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR
Sbjct: 361 LRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 397

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy TrEMBL
Match: A0A1S3ATW2 (28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.8e-189
Identity = 346/405 (85.43%), Postives = 371/405 (91.60%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSH RLLALISTKPPAQTPSFHLLPR FSTNN+GSNNN NSGSRDQ TSN+W
Sbjct: 1   MLSRLLPKPSHIRLLALISTKPPAQTPSFHLLPRFFSTNNNGSNNNNNSGSRDQPTSNIW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           KISQEND NFD+LFTQEADNLDGIA++DSAPRN+DSWV SK GD+ AEG+IFAS+EKEV+
Sbjct: 61  KISQENDENFDKLFTQEADNLDGIAEEDSAPRNDDSWVTSKSGDRDAEGDIFASLEKEVQ 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARK 180
           GNKDGDG + W   KKF+ WSLVE+EKSDVFNIEE   +IG+ RDE++ VDT S EDARK
Sbjct: 121 GNKDGDGYDGWPMEKKFDVWSLVEDEKSDVFNIEEGGGKIGEFRDELKEVDTESIEDARK 180

Query: 181 LEK--------EEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLS 240
           LEK        EEQELTAILKGP+R FGDLIAASGITDDMIDSL+ALKDLEG+EGLPPLS
Sbjct: 181 LEKENAMKLEREEQELTAILKGPDRAFGDLIAASGITDDMIDSLMALKDLEGIEGLPPLS 240

Query: 241 EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGD 300
           EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPG+
Sbjct: 241 EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGN 300

Query: 301 GKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISR 360
           GKF+VNDKEFDVYFPMLDSRA LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISR
Sbjct: 301 GKFIVNDKEFDVYFPMLDSRAVLLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISR 360

Query: 361 ALQNWEPDLRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
           ALQNWEPD RPPLRA GFLTRD+RVVERKKPGKAKARKSFQWVKR
Sbjct: 361 ALQNWEPDFRPPLRACGFLTRDSRVVERKKPGKAKARKSFQWVKR 405

[Close]

BLAST of CaUC01G001110.1 vs. ExPASy TrEMBL
Match: A0A0A0KNH1 (Ribosomal protein S9 OS=Cucumis sativus OX=3659 GN=Csa_5G141060 PE=3 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.9e-187
Identity = 343/405 (84.69%), Postives = 368/405 (90.86%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRLLPKPSH RLLALISTKPPAQTPSF LLPR FSTNN+GSNNN NSGS+DQ TSN+W
Sbjct: 1   MLSRLLPKPSHVRLLALISTKPPAQTPSFQLLPRFFSTNNNGSNNNNNSGSKDQPTSNIW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGGDQGAEGEIFASVEKEVR 120
           KISQEND NFDQLFTQEADNLDGIA++DSAPR +DSWV SK GDQ AEG++FAS+EKEV+
Sbjct: 61  KISQENDENFDQLFTQEADNLDGIAEEDSAPRKDDSWVTSKSGDQDAEGDLFASLEKEVQ 120

Query: 121 GNKDGDGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDAR- 180
           GNKDG   +EW   KKF+ WSLVEEEKSDVFNIEE  V+IG+  D ++ VDT SSEDAR 
Sbjct: 121 GNKDGVSHDEWPMEKKFDVWSLVEEEKSDVFNIEEGEVKIGEFGDGLKEVDTESSEDARK 180

Query: 181 -------KLEKEEQELTAILKGPNRVFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLS 240
                  KLEKEEQELTA+LKGPNR FGDLIAASG TDDMIDSL+ALKDLEG+EGLPPL+
Sbjct: 181 LEKENAMKLEKEEQELTAVLKGPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLT 240

Query: 241 EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGD 300
           EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVD+KGRAYGTGRRKCSIARVWIQPG+
Sbjct: 241 EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGN 300

Query: 301 GKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISR 360
           GKFVVNDKEFDVYFPMLDSRA LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISR
Sbjct: 301 GKFVVNDKEFDVYFPMLDSRAILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISR 360

Query: 361 ALQNWEPDLRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 398
           ALQNWEP+ RPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR
Sbjct: 361 ALQNWEPEFRPPLRASGFLTRDARVVERKKPGKAKARKSFQWVKR 405

[Close]

BLAST of CaUC01G001110.1 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-105
Identity = 231/440 (52.50%), Postives = 282/440 (64.09%), Query Frame = 0


Query: 1   MLSRLLPKPSHFRLLALISTKPPAQTPSFHLLPRLFSTNNDGSNNNRNSGSRDQRTSNVW 60
           MLSRL  + S+ R + L+S+K  +Q  S  + P   STN+ G   N +   R+ R    W
Sbjct: 1   MLSRLFLRHSNLRFVTLVSSKSNSQIFSSFIRP--LSTNSSGGGGNGDGNGRN-RNDVPW 60

Query: 61  KISQENDGNFDQLFTQEADNLDGIADDDSAPRNEDSWVQSKGG------------DQGAE 120
             +  ND       + ++    G+A     P  E  W +                D G E
Sbjct: 61  SFTGVNDDKSGPFSSDDSFGSSGVA-GSGLPGGEGKWPEEPKRWNIKEEEEKVVFDTGGE 120

Query: 121 GEIFASVEKEVRGNK------------------DGDGD-------------NEWVTAKKF 180
                   +E RGN+                   G GD             NEW  +K  
Sbjct: 121 VGQGIETSRERRGNEWEETKRWDMKEGEEKVVFGGGGDEVDGFGIRGEVKSNEWDVSK-- 180

Query: 181 EPWSLVEEEKSDVFNIEEDAVEIGKSRDEIEGVDTVSSEDARKLEKEEQELTAILKGPNR 240
            PW+L EEE+  VF+   +     ++  E+   + V  E    +EKEE+EL  ++KGP+R
Sbjct: 181 -PWNLKEEEEGVVFDTGGEVPFSFENSLEMAEEERVKKE---LIEKEEKELLEVIKGPDR 240

Query: 241 VFGDLIAASGITDDMIDSLIALKDLEGVEGLPPLSEIEDMRYEKNTRKSSRAEIERQKQE 300
            FGDLIA SGITD+M+DSLIALKD +GVEGLPPL+EIE++R EK+++KSSRAEIE Q QE
Sbjct: 241 AFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSSRAEIELQMQE 300

Query: 301 EVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAALLR 360
           ++AKARVRQVD+ GRAYGTGRRKCSIARVWIQPG+GKF VN+KEFDVYFPMLD RAALLR
Sbjct: 301 DIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLR 360

Query: 361 PFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRDARV 398
           P +ETKTLG WD+KCTVKGGGTTGQVGAIQLGISRALQNWEPD+R  LRA+GFLTRD+RV
Sbjct: 361 PLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRV 420

[Close]

BLAST of CaUC01G001110.1 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 )

HSP 1 Score: 96.7 bits (239), Expect = 4.6e-20
Identity = 60/127 (47.24%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 275 GTGRRKCSIARVWIQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFS-ETKTLGL---WDV 334
           GTGRRKC+IARV +Q G GK ++N ++   Y   L      L+       TLG    +D+
Sbjct: 85  GTGRRKCAIARVVLQEGTGKVIINYRDAKEY---LQGNPLWLQYVKVPLVTLGYENSYDI 144

Query: 335 KCTVKGGGTTGQVGAIQLGISRALQNWEPDLRPPLRASGFLTRDARVVERKKPGKAKARK 394
                GGG +GQ  AI LG++RAL     D R PL+  G LTRDARVVERKK G  KARK
Sbjct: 145 FVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARK 204

Query: 395 SFQWVKR 398
           + Q+ KR
Sbjct: 205 APQFSKR 208

The following BLAST results are available for this feature:

BLAST of CaUC01G001110.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874636.1	5.3e-204	93.20	30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida]	[more]
XP_022972996.1	1.3e-197	89.17	28S ribosomal protein S9, mitochondrial [Cucurbita maxima]	[more]
XP_022922373.1	2.2e-197	89.42	28S ribosomal protein S9, mitochondrial [Cucurbita moschata]	[more]
KAG6579377.1	2.8e-197	89.17	30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023550446.1	6.3e-197	88.92	28S ribosomal protein S9, mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC01G001110.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L6Z4	1.7e-104	52.50	30S ribosomal protein S9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS9M...	[more]
A8I7Z9	1.2e-36	55.07	30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 59...	[more]
A9IVX6	2.6e-36	54.17	30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) ...	[more]
A7INH2	3.4e-36	52.90	30S ribosomal protein S9 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / P...	[more]
B2S535	1.7e-35	53.15	30S ribosomal protein S9 OS=Brucella abortus (strain S19) OX=430066 GN=rpsI PE=3...	[more]

BLAST of CaUC01G001110.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7H1	6.1e-198	89.17	28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1E6E6	1.0e-197	89.42	28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DZS9	2.8e-195	88.16	28S ribosomal protein S9, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3ATW2	1.8e-189	85.43	28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 ...	[more]
A0A0A0KNH1	4.9e-187	84.69	Ribosomal protein S9 OS=Cucumis sativus OX=3659 GN=Csa_5G141060 PE=3 SV=1	[more]

BLAST of CaUC01G001110.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49080.1	1.2e-105	52.50	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT1G74970.1	4.6e-20	47.24	ribosomal protein S9	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 264..397 e-value: 9.4E-51 score: 173.5
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 277..397 e-value: 1.2E-47 score: 161.4
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 54..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..57
None	No IPR available	PANTHER	PTHR21569:SF1	28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL	coord: 54..397
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 336..354
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 268..397 score: 28.734322
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 272..397

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC01G001110	CaUC01G001110	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G001110.1-exon	CaUC01G001110.1-exon-Ciama_Chr01:926780..926871	exon
CaUC01G001110.1-exon	CaUC01G001110.1-exon-Ciama_Chr01:926986..927066	exon
CaUC01G001110.1-exon	CaUC01G001110.1-exon-Ciama_Chr01:928127..928567	exon
CaUC01G001110.1-exon	CaUC01G001110.1-exon-Ciama_Chr01:934211..934790	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC01G001110.1-cds	CaUC01G001110.1-cds-Ciama_Chr01:926780..926871	CDS
CaUC01G001110.1-cds	CaUC01G001110.1-cds-Ciama_Chr01:926986..927066	CDS
CaUC01G001110.1-cds	CaUC01G001110.1-cds-Ciama_Chr01:928127..928567	CDS
CaUC01G001110.1-cds	CaUC01G001110.1-cds-Ciama_Chr01:934211..934790	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC01G001110.1	CaUC01G001110.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding