CSPI07G16500.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G16500.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	classical arabinogalactan protein 26
Location	Chr7: 15106389 .. 15107142 (-)
Sequence length	754
RNA-Seq Expression	CSPI07G16500.1
Synteny	CSPI07G16500.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACTCTCTCACATCACACTCTCACCCTCTCTTTTCACCTTTAATAATCATAACCCCTTTCTTCTTCCTTCATATTCTTTCTTCTTCCTCTCAATTTCTCTACTTTCTTTTAGAAACATAAAATCTCTCTCTCATCATTGTAAATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCGTTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATCTCCGCCGCGCCCGAACTTTCTCCGTCACCAGCGCCGGCTTCAGACATTTCTCCACTCTTTCCCACTCCGGGAGACGCTACCCTTCCCCCCTCCTCCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCCGATTTTATGGACGCTGCGCCGGCGCCGGAGATGCCTCTTTCGCCCTCTCAGTCCTTGCCATTCTCTACAGCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTCTTTGTAGCTCTTACGACGACTCTCGTTGCAGAGCTACGCCGGTGACGGGTGCACCGCCATTGCTCGGATTTTAGTGGACATTGGAGTGTAGTTATGTTTTATGGCACGAGTAATTCTCTTATCTTTTACTTTTTGTTTTCTTGTTACTACATATATGTATATTTAATTTTTGGATTTGAGTCAATTTTTATTTTTTCAATTCCATAATTTGGGTTTTTTGGGGAAAGAAAATTGAATTATTCTTTGAACG

mRNA sequence

AACACTCTCTCACATCACACTCTCACCCTCTCTTTTCACCTTTAATAATCATAACCCCTTTCTTCTTCCTTCATATTCTTTCTTCTTCCTCTCAATTTCTCTACTTTCTTTTAGAAACATAAAATCTCTCTCTCATCATTGTAAATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCGTTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATCTCCGCCGCGCCCGAACTTTCTCCGTCACCAGCGCCGGCTTCAGACATTTCTCCACTCTTTCCCACTCCGGGAGACGCTACCCTTCCCCCCTCCTCCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCCGATTTTATGGACGCTGCGCCGGCGCCGGAGATGCCTCTTTCGCCCTCTCAGTCCTTGCCATTCTCTACAGCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTCTTTGTAGCTCTTACGACGACTCTCGTTGCAGAGCTACGCCGGTGACGGGTGCACCGCCATTGCTCGGATTTTAGTGGACATTGGAGTGTAGTTATGTTTTATGGCACGAGTAATTCTCTTATCTTTTACTTTTTGTTTTCTTGTTACTACATATATGTATATTTAATTTTTGGATTTGAGTCAATTTTTATTTTTTCAATTCCATAATTTGGGTTTTTTGGGGAAAGAAAATTGAATTATTCTTTGAACG

Coding sequence (CDS)

ATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCGTTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATCTCCGCCGCGCCCGAACTTTCTCCGTCACCAGCGCCGGCTTCAGACATTTCTCCACTCTTTCCCACTCCGGGAGACGCTACCCTTCCCCCCTCCTCCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCCGATTTTATGGACGCTGCGCCGGCGCCGGAGATGCCTCTTTCGCCCTCTCAGTCCTTGCCATTCTCTACAGCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTCTTTGTAGCTCTTACGACGACTCTCGTTGCAGAGCTACGCCGGTGA

Protein sequence

MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPELSPSPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSVFVALTTTLVAELRR*

Homology

[Close]

BLAST of CSPI07G16500.1 vs. ExPASy Swiss-Prot
Match: Q94F57 (Classical arabinogalactan protein 26 OS=Arabidopsis thaliana OX=3702 GN=AGP26 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 2.6e-04
Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 36  ISSISAAPELSP---------SPAPASDISPLFPTPGDATLPPSS-----LPTIPSSPSP 95
           +S+ISAAP   P         +PA + D SPLFPTPG + + PS      +PTIPSS SP
Sbjct: 25  LSTISAAPSFLPEAPSSFSASTPAMSPDTSPLFPTPGSSEMSPSPSESSIMPTIPSSLSP 84

Query: 96  PNPDFMDAAPAPEMPLSPSQS-LPFSTAAALNSGGWCCSVFVALTTTL 129
           PNPD +   P P + +SP  S LP S++  L S      + V L   L
Sbjct: 85  PNPDAV--TPDPLLEVSPVGSPLPASSSVCLVSSQLSSLLLVLLMLLL 130

[Close]

BLAST of CSPI07G16500.1 vs. ExPASy TrEMBL
Match: A0A0A0K510 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390090 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.2e-62
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPELSPSPAPASDISPLFP 60
           MASIFSLYIPIFMAYTASVFPFSFASYPN FPTHLISSISAAPE SPSPAPASDISPLFP
Sbjct: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNDFPTHLISSISAAPEFSPSPAPASDISPLFP 60

Query: 61  TPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSV 120
           TPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSV
Sbjct: 61  TPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSV 120

Query: 121 FVALTTTLVAELRR 135
           FVALTTTLVAELRR
Sbjct: 121 FVALTTTLVAELRR 134

[Close]

BLAST of CSPI07G16500.1 vs. ExPASy TrEMBL
Match: A0A5A7UQZ3 (Classical arabinogalactan protein 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002010 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.1e-53
Identity = 116/137 (84.67%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTH---LISSISAAPELSPSPAPASDISP 60
           MASIFSLYIPIFMAYTAS FPF+FASYPNYFPTH   + SSISAAPE SP+PAP+SDISP
Sbjct: 1   MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISP 60

Query: 61  LFPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWC 120
           LFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPLSP+ S+PFS AAALNS GWC
Sbjct: 61  LFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPLSPTWSMPFSAAAALNSVGWC 120

Query: 121 CSVFVALTTTLVAELRR 135
           CSVF+AL T L AEL R
Sbjct: 121 CSVFLALMTALAAELHR 137

[Close]

BLAST of CSPI07G16500.1 vs. ExPASy TrEMBL
Match: A0A1S3BRG9 (classical arabinogalactan protein 26 OS=Cucumis melo OX=3656 GN=LOC103492730 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.1e-53
Identity = 116/137 (84.67%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTH---LISSISAAPELSPSPAPASDISP 60
           MASIFSLYIPIFMAYTAS FPF+FASYPNYFPTH   + SSISAAPE SP+PAP+SDISP
Sbjct: 1   MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISP 60

Query: 61  LFPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWC 120
           LFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPLSP+ S+PFS AAALNS GWC
Sbjct: 61  LFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPLSPTWSMPFSAAAALNSVGWC 120

Query: 121 CSVFVALTTTLVAELRR 135
           CSVF+AL T L AEL R
Sbjct: 121 CSVFLALMTALAAELHR 137

[Close]

BLAST of CSPI07G16500.1 vs. ExPASy TrEMBL
Match: A0A6J1GPB2 (classical arabinogalactan protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111456234 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPEL--SPSPAPASDISPL 60
           MASIFSLYIPIFMAYTAS+ PFSFASYPN+FP  LISSISAAPE   SPSP+PASDI+PL
Sbjct: 1   MASIFSLYIPIFMAYTASILPFSFASYPNHFPP-LISSISAAPEFSPSPSPSPASDIAPL 60

Query: 61  FPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCC 120
           FPTPG ATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPL PSQSLPFS AA LNSGGWC 
Sbjct: 61  FPTPGGATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLPPSQSLPFSAAATLNSGGWCW 120

Query: 121 SVFVALTTTLVAELRR 135
           S++VALT  +VAE+ R
Sbjct: 121 SIWVALTAAIVAEVCR 135

[Close]

BLAST of CSPI07G16500.1 vs. ExPASy TrEMBL
Match: A0A6J1JX46 (classical arabinogalactan protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111488263 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48
Identity = 113/136 (83.09%), Postives = 120/136 (88.24%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPEL--SPSPAPASDISPL 60
           MASIFSLYIPIFMAYTAS+F FSFASYPN+FP  LISSISAAPE   SPSP+PASDISPL
Sbjct: 1   MASIFSLYIPIFMAYTASIFAFSFASYPNHFPP-LISSISAAPEFSPSPSPSPASDISPL 60

Query: 61  FPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCC 120
           FPTPG ATLPPSSLPTIPSSPSPPNPDFMDA PAPEMPL PSQSLPFS AA LNSGGWC 
Sbjct: 61  FPTPGGATLPPSSLPTIPSSPSPPNPDFMDATPAPEMPLPPSQSLPFSAAATLNSGGWCW 120

Query: 121 SVFVALTTTLVAELRR 135
           S++VALT  +V E+ R
Sbjct: 121 SIWVALTAAIVEEVCR 135

[Close]

BLAST of CSPI07G16500.1 vs. NCBI nr
Match: XP_011659314.1 (classical arabinogalactan protein 26 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPELSPSPAPASDISPLFP 60
           MASIFSLYIPIFMAYTASVFPFSFASYPN FPTHLISSISAAPE SPSPAPASDISPLFP
Sbjct: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNDFPTHLISSISAAPEFSPSPAPASDISPLFP 60

Query: 61  TPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSV 120
           TPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSV
Sbjct: 61  TPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSV 120

Query: 121 FVALTTTLVAELRR 135
           FVALTTTLVAELRR
Sbjct: 121 FVALTTTLVAELRR 134

[Close]

BLAST of CSPI07G16500.1 vs. NCBI nr
Match: XP_008451434.1 (PREDICTED: classical arabinogalactan protein 26 [Cucumis melo] >KAA0057538.1 classical arabinogalactan protein 26 [Cucumis melo var. makuwa] >TYK18260.1 classical arabinogalactan protein 26 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 116/137 (84.67%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTH---LISSISAAPELSPSPAPASDISP 60
           MASIFSLYIPIFMAYTAS FPF+FASYPNYFPTH   + SSISAAPE SP+PAP+SDISP
Sbjct: 1   MASIFSLYIPIFMAYTASFFPFAFASYPNYFPTHRYLMTSSISAAPEFSPAPAPSSDISP 60

Query: 61  LFPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWC 120
           LFPTPGDATLPPSSLPTIPSSPSPPNPDFMD APAPEMPLSP+ S+PFS AAALNS GWC
Sbjct: 61  LFPTPGDATLPPSSLPTIPSSPSPPNPDFMDVAPAPEMPLSPTWSMPFSAAAALNSVGWC 120

Query: 121 CSVFVALTTTLVAELRR 135
           CSVF+AL T L AEL R
Sbjct: 121 CSVFLALMTALAAELHR 137

[Close]

BLAST of CSPI07G16500.1 vs. NCBI nr
Match: XP_023548939.1 (classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49
Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPEL--SPSPAPASDISPL 60
           MASIFSLYIPIFMAYTAS+FPFSFASYPN+FP  LISSISAAPE   SPSP+PASDISPL
Sbjct: 1   MASIFSLYIPIFMAYTASIFPFSFASYPNHFPP-LISSISAAPEFSPSPSPSPASDISPL 60

Query: 61  FPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCC 120
           FPTPG ATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPL PSQSLPFS  A LNSGGWC 
Sbjct: 61  FPTPGGATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLPPSQSLPFSATATLNSGGWCW 120

Query: 121 SVFVALTTTLVAELRR 135
           S++VALT  +VAE+ R
Sbjct: 121 SIWVALTAAIVAEVCR 135

[Close]

BLAST of CSPI07G16500.1 vs. NCBI nr
Match: KAG6575865.1 (hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.7 bits (522), Expect = 2.5e-49
Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPEL--SPSPAPASDISPL 60
           MASIFSLYIPIFMAYTAS+ PFSFASYPN+FP  LISSISAAPE   SPSP+PASDISPL
Sbjct: 1   MASIFSLYIPIFMAYTASILPFSFASYPNHFPP-LISSISAAPEFSPSPSPSPASDISPL 60

Query: 61  FPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCC 120
           FPTPG ATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPL PSQSLPFS AA LNSGGWC 
Sbjct: 61  FPTPGGATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLPPSQSLPFSAAATLNSGGWCW 120

Query: 121 SVFVALTTTLVAELRR 135
           S++VALT  +VAE+ R
Sbjct: 121 SIWVALTAAIVAEVCR 135

[Close]

BLAST of CSPI07G16500.1 vs. NCBI nr
Match: XP_022953817.1 (classical arabinogalactan protein 26 [Cucurbita moschata])

HSP 1 Score: 204.5 bits (519), Expect = 5.7e-49
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPEL--SPSPAPASDISPL 60
           MASIFSLYIPIFMAYTAS+ PFSFASYPN+FP  LISSISAAPE   SPSP+PASDI+PL
Sbjct: 1   MASIFSLYIPIFMAYTASILPFSFASYPNHFPP-LISSISAAPEFSPSPSPSPASDIAPL 60

Query: 61  FPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCC 120
           FPTPG ATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPL PSQSLPFS AA LNSGGWC 
Sbjct: 61  FPTPGGATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLPPSQSLPFSAAATLNSGGWCW 120

Query: 121 SVFVALTTTLVAELRR 135
           S++VALT  +VAE+ R
Sbjct: 121 SIWVALTAAIVAEVCR 135

[Close]

BLAST of CSPI07G16500.1 vs. TAIR 10
Match: AT2G47930.1 (arabinogalactan protein 26 )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 36  ISSISAAPELSP---------SPAPASDISPLFPTPGDATLPPSS-----LPTIPSSPSP 95
           +S+ISAAP   P         +PA + D SPLFPTPG + + PS      +PTIPSS SP
Sbjct: 25  LSTISAAPSFLPEAPSSFSASTPAMSPDTSPLFPTPGSSEMSPSPSESSIMPTIPSSLSP 84

Query: 96  PNPDFMDAAPAPEMPLSPSQS-LPFSTAAALNSGGWCCSVFVALTTTL 129
           PNPD +   P P + +SP  S LP S++  L S      + V L   L
Sbjct: 85  PNPDAV--TPDPLLEVSPVGSPLPASSSVCLVSSQLSSLLLVLLMLLL 130

The following BLAST results are available for this feature:

BLAST of CSPI07G16500.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94F57	2.6e-04	41.67	Classical arabinogalactan protein 26 OS=Arabidopsis thaliana OX=3702 GN=AGP26 PE...	[more]

BLAST of CSPI07G16500.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K510	8.2e-62	98.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390090 PE=4 SV=1	[more]
A0A5A7UQZ3	9.1e-53	84.67	Classical arabinogalactan protein 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BRG9	9.1e-53	84.67	classical arabinogalactan protein 26 OS=Cucumis melo OX=3656 GN=LOC103492730 PE=...	[more]
A0A6J1GPB2	2.7e-49	83.82	classical arabinogalactan protein 26 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]
A0A6J1JX46	2.3e-48	83.09	classical arabinogalactan protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111488263...	[more]

BLAST of CSPI07G16500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659314.1	1.7e-61	98.51	classical arabinogalactan protein 26 [Cucumis sativus]	[more]
XP_008451434.1	1.9e-52	84.67	PREDICTED: classical arabinogalactan protein 26 [Cucumis melo] >KAA0057538.1 cla...	[more]
XP_023548939.1	1.5e-49	84.56	classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]	[more]
KAG6575865.1	2.5e-49	84.56	hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022953817.1	5.7e-49	83.82	classical arabinogalactan protein 26 [Cucurbita moschata]	[more]

BLAST of CSPI07G16500.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47930.1	1.8e-05	41.67	arabinogalactan protein 26	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..98
None	No IPR available	PANTHER	PTHR35725:SF4	CLASSICAL ARABINOGALACTAN PROTEIN 26	coord: 1..125
IPR039346	Classical arabinogalactan protein 25/26	PANTHER	PTHR35725	CLASSICAL ARABINOGALACTAN PROTEIN 26	coord: 1..125

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G16500	CSPI07G16500	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G16500.1.utr3p1	CSPI07G16500.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G16500.1.cds1	CSPI07G16500.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G16500.1.utr5p1	CSPI07G16500.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G16500.1	CSPI07G16500.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane