CSPI07G16500 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACACTCTCTCACATCACACTCTCACCCTCTCTTTTCACCTTTAATAATCATAACCCCTTTCTTCTTCCTTCATATTCTTTCTTCTTCCTCTCAATTTCTCTACTTTCTTTTAGAAACATAAAATCTCTCTCTCATCATTGTAAATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCGTTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATCTCCGCCGCGCCCGAACTTTCTCCGTCACCAGCGCCGGCTTCAGACATTTCTCCACTCTTTCCCACTCCGGGAGACGCTACCCTTCCCCCCTCCTCCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCCGATTTTATGGACGCTGCGCCGGCGCCGGAGATGCCTCTTTCGCCCTCTCAGTCCTTGCCATTCTCTACAGCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTCTTTGTAGCTCTTACGACGACTCTCGTTGCAGAGCTACGCCGGTGACGGGTGCACCGCCATTGCTCGGATTTTAGTGGACATTGGAGTGTAGTTATGTTTTATGGCACGAGTAATTCTCTTATCTTTTACTTTTTGTTTTCTTGTTACTACATATATGTATATTTAATTTTTGGATTTGAGTCAATTTTTATTTTTTCAATTCCATAATTTGGGTTTTTTGGGGAAAGAAAATTGAATTATTCTTTGAACG AACACTCTCTCACATCACACTCTCACCCTCTCTTTTCACCTTTAATAATCATAACCCCTTTCTTCTTCCTTCATATTCTTTCTTCTTCCTCTCAATTTCTCTACTTTCTTTTAGAAACATAAAATCTCTCTCTCATCATTGTAAATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCGTTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATCTCCGCCGCGCCCGAACTTTCTCCGTCACCAGCGCCGGCTTCAGACATTTCTCCACTCTTTCCCACTCCGGGAGACGCTACCCTTCCCCCCTCCTCCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCCGATTTTATGGACGCTGCGCCGGCGCCGGAGATGCCTCTTTCGCCCTCTCAGTCCTTGCCATTCTCTACAGCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTCTTTGTAGCTCTTACGACGACTCTCGTTGCAGAGCTACGCCGGTGACGGGTGCACCGCCATTGCTCGGATTTTAGTGGACATTGGAGTGTAGTTATGTTTTATGGCACGAGTAATTCTCTTATCTTTTACTTTTTGTTTTCTTGTTACTACATATATGTATATTTAATTTTTGGATTTGAGTCAATTTTTATTTTTTCAATTCCATAATTTGGGTTTTTTGGGGAAAGAAAATTGAATTATTCTTTGAACG ATGGCTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCGTTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATCTCCGCCGCGCCCGAACTTTCTCCGTCACCAGCGCCGGCTTCAGACATTTCTCCACTCTTTCCCACTCCGGGAGACGCTACCCTTCCCCCCTCCTCCTTGCCTACCATACCCTCCAGTCCCAGCCCTCCGAACCCCGATTTTATGGACGCTGCGCCGGCGCCGGAGATGCCTCTTTCGCCCTCTCAGTCCTTGCCATTCTCTACAGCTGCTGCTCTTAACTCCGGTGGGTGGTGTTGTTCGGTCTTTGTAGCTCTTACGACGACTCTCGTTGCAGAGCTACGCCGGTGA MASIFSLYIPIFMAYTASVFPFSFASYPNYFPTHLISSISAAPELSPSPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDAAPAPEMPLSPSQSLPFSTAAALNSGGWCCSVFVALTTTLVAELRR* Homology
BLAST of CSPI07G16500 vs. ExPASy Swiss-Prot
Match: Q94F57 (Classical arabinogalactan protein 26 OS=Arabidopsis thaliana OX=3702 GN=AGP26 PE=2 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 2.6e-04 Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of CSPI07G16500 vs. ExPASy TrEMBL
Match: A0A0A0K510 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390090 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 8.2e-62 Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of CSPI07G16500 vs. ExPASy TrEMBL
Match: A0A5A7UQZ3 (Classical arabinogalactan protein 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002010 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 9.1e-53 Identity = 116/137 (84.67%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of CSPI07G16500 vs. ExPASy TrEMBL
Match: A0A1S3BRG9 (classical arabinogalactan protein 26 OS=Cucumis melo OX=3656 GN=LOC103492730 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 9.1e-53 Identity = 116/137 (84.67%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of CSPI07G16500 vs. ExPASy TrEMBL
Match: A0A6J1GPB2 (classical arabinogalactan protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111456234 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49 Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of CSPI07G16500 vs. ExPASy TrEMBL
Match: A0A6J1JX46 (classical arabinogalactan protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111488263 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.3e-48 Identity = 113/136 (83.09%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of CSPI07G16500 vs. NCBI nr
Match: XP_011659314.1 (classical arabinogalactan protein 26 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61 Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of CSPI07G16500 vs. NCBI nr
Match: XP_008451434.1 (PREDICTED: classical arabinogalactan protein 26 [Cucumis melo] >KAA0057538.1 classical arabinogalactan protein 26 [Cucumis melo var. makuwa] >TYK18260.1 classical arabinogalactan protein 26 [Cucumis melo var. makuwa]) HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52 Identity = 116/137 (84.67%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of CSPI07G16500 vs. NCBI nr
Match: XP_023548939.1 (classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49 Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of CSPI07G16500 vs. NCBI nr
Match: KAG6575865.1 (hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 205.7 bits (522), Expect = 2.5e-49 Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of CSPI07G16500 vs. NCBI nr
Match: XP_022953817.1 (classical arabinogalactan protein 26 [Cucurbita moschata]) HSP 1 Score: 204.5 bits (519), Expect = 5.7e-49 Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of CSPI07G16500 vs. TAIR 10
Match: AT2G47930.1 (arabinogalactan protein 26 ) HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05 Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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