CSPI07G14850.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI07G14850.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr7: 13469962 .. 13470213 (-)
Sequence length	252
RNA-Seq Expression	CSPI07G14850.1
Synteny	CSPI07G14850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACCCACTATGCCAAAACGAGCTATTTCCGAGAAGCCTGCAGGGTAACACGACACCAAGATCTCATTCGATCCTTGTCGAAATTTTTAAGCACCGTCAAGCTAAGGCCCACAAAATGGGCTCGGACAGTGGTGCCGGTGACGATAATAAAGGTAAAAAAAGTGACAGAACTCCCGGAGAGATTGAAGAACAAGCGGATGAAGGAGAGAAACATAACAAAAGTTTGGGACTGTGTGGAGGTGTTTGA

mRNA sequence

ATGGCTAACCCACTATGCCAAAACGAGCTATTTCCGAGAAGCCTGCAGGGTAACACGACACCAAGATCTCATTCGATCCTTGTCGAAATTTTTAAGCACCGTCAAGCTAAGGCCCACAAAATGGGCTCGGACAGTGGTGCCGGTGACGATAATAAAGGTAAAAAAAGTGACAGAACTCCCGGAGAGATTGAAGAACAAGCGGATGAAGGAGAGAAACATAACAAAAGTTTGGGACTGTGTGGAGGTGTTTGA

Coding sequence (CDS)

ATGGCTAACCCACTATGCCAAAACGAGCTATTTCCGAGAAGCCTGCAGGGTAACACGACACCAAGATCTCATTCGATCCTTGTCGAAATTTTTAAGCACCGTCAAGCTAAGGCCCACAAAATGGGCTCGGACAGTGGTGCCGGTGACGATAATAAAGGTAAAAAAAGTGACAGAACTCCCGGAGAGATTGAAGAACAAGCGGATGAAGGAGAGAAACATAACAAAAGTTTGGGACTGTGTGGAGGTGTTTGA

Protein sequence

MANPLCQNELFPRSLQGNTTPRSHSILVEIFKHRQAKAHKMGSDSGAGDDNKGKKSDRTPGEIEEQADEGEKHNKSLGLCGGV*

Homology

The following BLAST results are available for this feature:

BLAST of CSPI07G14850.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G14850.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G14850.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI07G14850.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..83

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G14850	CSPI07G14850	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G14850.1.cds1	CSPI07G14850.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G14850.1	CSPI07G14850.1-protein	polypeptide