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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGAGGGGACGGTGGCGGAAGCGTCGAACCCTGCGGTTCAAATGACGATGGGATACAAAGGTGGGTGTAGAAAAATGATTTCTGTGATTCCAAAGCAGAGACAGTTAGTGAAGACAATGATGTATCACTCCATAAAGTGTTTTATTATATCATTCTTTCGTCTATCGTTCTCCACTGCTACCGGTACCGGAGCTCCTCCGTAG mRNA sequence ATGGTGGAGGGGACGGTGGCGGAAGCGTCGAACCCTGCGGTTCAAATGACGATGGGATACAAAGGTGGGTGTAGAAAAATGATTTCTGTGATTCCAAAGCAGAGACAGTTAGTGAAGACAATGATGTATCACTCCATAAAGTGTTTTATTATATCATTCTTTCGTCTATCGTTCTCCACTGCTACCGGTACCGGAGCTCCTCCGTAG Coding sequence (CDS) ATGGTGGAGGGGACGGTGGCGGAAGCGTCGAACCCTGCGGTTCAAATGACGATGGGATACAAAGGTGGGTGTAGAAAAATGATTTCTGTGATTCCAAAGCAGAGACAGTTAGTGAAGACAATGATGTATCACTCCATAAAGTGTTTTATTATATCATTCTTTCGTCTATCGTTCTCCACTGCTACCGGTACCGGAGCTCCTCCGTAG Protein sequence MVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQRQLVKTMMYHSIKCFIISFFRLSFSTATGTGAPP*
Homology
BLAST of CSPI06G18430.1 vs. ExPASy TrEMBL
Match: A0A0A0KH01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06 Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 1 MVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQRQLVKTMMYHSIKCFIISFF 55
+VE EAS+ VQM MGYK G KM SVIP +R+LVK MMY SIK F+IS F
Sbjct: 34 VVEAVTVEASDRVVQMAMGYKTGGPKMKSVIPMKRKLVKRMMYESIKNFVISRF 87
BLAST of CSPI06G18430.1 vs. NCBI nr
Match: KAE8647204.1 (hypothetical protein Csa_019006, partial [Cucumis sativus]) HSP 1 Score: 137.9 bits (346), Expect = 3.3e-29 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0
Query: 1 MVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQRQLVKTMMYHSIKCFIISFFRLSFST 60
MVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQR+LVKTMMYHSIKCFIISFFRLSFST
Sbjct: 3 MVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQRKLVKTMMYHSIKCFIISFFRLSFST 62
Query: 61 ATGTGAPP 69
ATGTGAPP
Sbjct: 63 ATGTGAPP 70
BLAST of CSPI06G18430.1 vs. NCBI nr
Match: KGN47677.1 (hypothetical protein Csa_018325 [Cucumis sativus]) HSP 1 Score: 60.8 bits (146), Expect = 5.2e-06 Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 1 MVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQRQLVKTMMYHSIKCFIISFF 55
+VE EAS+ VQM MGYK G KM SVIP +R+LVK MMY SIK F+IS F
Sbjct: 34 VVEAVTVEASDRVVQMAMGYKTGGPKMKSVIPMKRKLVKRMMYESIKNFVISRF 87
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KH01 | 2.5e-06 | 61.11 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8647204.1 | 3.3e-29 | 98.53 | hypothetical protein Csa_019006, partial [Cucumis sativus] | [more] |
| KGN47677.1 | 5.2e-06 | 61.11 | hypothetical protein Csa_018325 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| CSPI06G18430.1.cds1 | CSPI06G18430.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CSPI06G18430.1 | CSPI06G18430.1-protein | polypeptide |
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