Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGCTCGGGGATACGCGTTCGCGCACGCTCATCGATGCGACGGTGGTTCCATACCCTTTAGGTTTCTGCCAAGGTTTTACGGAAAGAACTTTTCAAGTTTTTCCTTGGCTCAATACCTACAGGGTGGTGAACCTGAGTAGACGGAAGCCCGTGGGGGAAGGGCCTTTTTCGGTCGGGACAGGGACGCAAGGTTATATGAAAAAGCCGCCTAAACTCGGATCCTAA mRNA sequence ATGGCGCTCGGGGATACGCGTTCGCGCACGCTCATCGATGCGACGGTGGTTCCATACCCTTTAGGTTTCTGCCAAGGTTTTACGGAAAGAACTTTTCAAGTTTTTCCTTGGCTCAATACCTACAGGGTGGTGAACCTGAGTAGACGGAAGCCCGTGGGGGAAGGGCCTTTTTCGGTCGGGACAGGGACGCAAGGTTATATGAAAAAGCCGCCTAAACTCGGATCCTAA Coding sequence (CDS) ATGGCGCTCGGGGATACGCGTTCGCGCACGCTCATCGATGCGACGGTGGTTCCATACCCTTTAGGTTTCTGCCAAGGTTTTACGGAAAGAACTTTTCAAGTTTTTCCTTGGCTCAATACCTACAGGGTGGTGAACCTGAGTAGACGGAAGCCCGTGGGGGAAGGGCCTTTTTCGGTCGGGACAGGGACGCAAGGTTATATGAAAAAGCCGCCTAAACTCGGATCCTAA Protein sequence MALGDTRSRTLIDATVVPYPLGFCQGFTERTFQVFPWLNTYRVVNLSRRKPVGEGPFSVGTGTQGYMKKPPKLGS*
Homology
BLAST of CSPI06G03920.1 vs. ExPASy TrEMBL
Match: A0A0A0K9D2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G045120 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.5e-07 Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0 Query: 1 MALGDTRSRTLIDATVVPYPLGFCQGFTERTFQVF 36 MA GDT SR LIDATV PY LGFCQGFT+RTFQVF Sbjct: 1 MAFGDTPSRMLIDATVAPYALGFCQGFTKRTFQVF 35
BLAST of CSPI06G03920.1 vs. NCBI nr
Match: KAE8646632.1 (hypothetical protein Csa_005372 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 5.2e-07 Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0 Query: 1 MALGDTRSRTLIDATVVPYPLGFCQGFTERTFQVF 36 MA GDT SR LIDATV PY LGFCQGFT+RTFQVF Sbjct: 1 MAFGDTPSRMLIDATVAPYALGFCQGFTKRTFQVF 35
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9D2 | 2.5e-07 | 82.86 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G045120 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAE8646632.1 | 5.2e-07 | 82.86 | hypothetical protein Csa_005372 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 54..75 |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CSPI06G03920.1.cds1 | CSPI06G03920.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CSPI06G03920.1 | CSPI06G03920.1-protein | polypeptide |
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