CSPI01G23570.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23570.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-CH-type domain-containing protein
Location	Chr1: 19076129 .. 19078562 (-)
Sequence length	1178
RNA-Seq Expression	CSPI01G23570.1
Synteny	CSPI01G23570.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATGAGCTCTTAATTTACTGTGTGTTTATGATAATTTGATATTCTTGATTGTGGTATGGTATTTCTTCTAAATTTTGATTTCGTGTTCTACTTGTACATTCTGAAATCTGTATGGGAATTGCAACTGTACATGGTTAGGACTTAGAAGGAAAGAGGAAGGGGAGAAAAGAAATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGGAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGTCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACGTAAGTATTCATTCTAATTAACTCCCATTTTTTCCTATCAGATTTCTTTCATTCCCTCAGAAACCCAATTCTTAATAGAATCCTTTGATTATCATTGGCTTCGTTGAAGTTTTACCTAGACTTGGATTAACTTGGGTTTTGCTAGTAGTTTGATTGGAGATAAATTAAAAATCTAAGCTCCTGAAAGATAAGAAGACGAGTTTTTTGCTTGGGAAAGATTTCTAAACTTTCTCTGCTTCTTCTTTTAGCAGCAATTCTCTTGAGTTTTCTGCCATGAATTACCCTCAAACAGTTTCATCACTTTGTTGTATTGTGTAAATTCACTATGACTACAAACTTAAAGTGGTTGGATGGATCTTCTGCTGTCAGCATTTGGTTTTCTTTATTGTACTAGAAGTAATTAACTCAATTTTGGTGGCTTCCATCTGTTGTAACTTCTAAGTTGTTCAAAGTTAACATTTATCAATATAGTATCATGTAGATAAGATAAAAGAATGATATATGACATATCTGAAGTTTGGATATCTCCTTTTTTTCCTTTGCATTTCAGAATATGATGGTGTCACACATAAGTTCCAATAAATTTCCATGTGTCCAAGTTGAACTTACAAACTTGCCCATAGCTAATCCGTTCCATTTTTCTTTAATTCTTCTATTTGTGATAATGTAAATCATTCAGACACTTAGAAATTAGGCAGACAAATTAGAATTCAGGTTAGAAACCTTGCATCAACTTGATTTTGTGTGTAAACAGCTTCACTATTGAGAATGAATATATTGTCATTAAATGGTGTTTGGTGCACTGAAGTATGAAGTTAATATATTAGAGTTAGAAAATGGGTGTAGAGTTGTAAGATGAAATTTCCTACTAAAAGTGCAAACTTTATCGGTATTTGCTATCAAAATTGATTTGCTGAACAACTTATGAATTGGTGAGCTAGACACCCCAAAAGTTTATGTATTGTCATATTAGAAGGTATTCAACAGATATAAATGAGGTATATGATCGTTTGTATGAGAACGACTATTCTCAAACGTAGGAACACCATTAGACATCTTGAAGGTGCTGGAGATCATTCCAACTCTCTAGATAAGAACTCTCAATCAGCCAAATTTAGATTTCTTTTGGCTAGTTGGTGTATATGACTCTCCCATTTCAAAAAATTCGAACCTCTTGAATTATGTTTAAGTTGAAGATTTGGCAATACATTTTTGTTACTATTAGCTTGACAAGTGATACAATCTTTTCCTTGCAGTACTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAGACTTAGGAAGAAGGAAGAAAATTAATGAAGAAAGGAAAATGTAGAGGCAATTTGGGTTCTTCAGGCCTTTGTATATATATTTACACTTTCAGTTTGATTAGTTAATTTTGAAGGGGTTGGTTTATTTAGGCATTTCTCAATTGTAGTGTAGTGAATGGCTAATGAATAGGG

mRNA sequence

GGGATGAGCTCTTAATTTACTGTGTGTTTATGATAATTTGATATTCTTGATTGTGGTATGGTATTTCTTCTAAATTTTGATTTCGTGTTCTACTTGTACATTCTGAAATCTGTATGGGAATTGCAACTGTACATGGTTAGGACTTAGAAGGAAAGAGGAAGGGGAGAAAAGAAATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGGAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGTCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACTACTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAGACTTAGGAAGAAGGAAGAAAATTAATGAAGAAAGGAAAATGTAGAGGCAATTTGGGTTCTTCAGGCCTTTGTATATATATTTACACTTTCAGTTTGATTAGTTAATTTTGAAGGGGTTGGTTTATTTAGGCATTTCTCAATTGTAGTGTAGTGAATGGCTAATGAATAGGG

Coding sequence (CDS)

ATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGGAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGTCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACTACTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG

Protein sequence

MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS*

Homology

[Close]

BLAST of CSPI01G23570.1 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.6e-152
Identity = 275/277 (99.28%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS
Sbjct: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120

Query: 121 VEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
            EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVATAVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of CSPI01G23570.1 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.1e-148
Identity = 270/277 (97.47%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHG+ LLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFH MSAVEAPRGDS
Sbjct: 1   MVITYKYHGS-LLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHRMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGV D
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLD 120

Query: 121 VEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
            EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVA AVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of CSPI01G23570.1 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.1e-148
Identity = 270/277 (97.47%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHG+ LLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFH MSAVEAPRGDS
Sbjct: 1   MVITYKYHGS-LLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHRMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGV D
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLD 120

Query: 121 VEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
            EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVA AVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of CSPI01G23570.1 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121
Identity = 224/228 (98.25%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGV D EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATA 229
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVA A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of CSPI01G23570.1 vs. ExPASy TrEMBL
Match: A0A6J1HM49 (uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC111464834 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.5e-107
Identity = 206/235 (87.66%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 48  HSMSAVEAPRGDSDPANPSSLPFRDARSAAG---SCSDMSVLDDSDDQSWHSVFDSTAWG 107
           H MSAV APRGD   A+PSSLP+RDARSAAG   S SD+SVLDDSDDQSWHSVFDSTAWG
Sbjct: 110 HRMSAVLAPRGDPILADPSSLPYRDARSAAGSSSSSSDLSVLDDSDDQSWHSVFDSTAWG 169

Query: 108 SHGEGQFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESS 167
           SHG+G FSGEIEGVPD E G FIS SSSEVDLESGDLEVKVHLGKIERDCRICHLELES 
Sbjct: 170 SHGDGLFSGEIEGVPDAETGGFISGSSSEVDLESGDLEVKVHLGKIERDCRICHLELESG 229

Query: 168 GGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSN 227
           GGRD++DTPI LGCCCRGDLGTAHK CAETWFKIKGNT CEICGATAQNVASQQINEPSN
Sbjct: 230 GGRDHNDTPILLGCCCRGDLGTAHKHCAETWFKIKGNTICEICGATAQNVASQQINEPSN 289

Query: 228 --AVATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
             A A AVASSA+TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 290 AAAAAAAVASSAMTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 344

[Close]

BLAST of CSPI01G23570.1 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 3.3e-152
Identity = 275/277 (99.28%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS
Sbjct: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120

Query: 121 VEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
            EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVATAVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of CSPI01G23570.1 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa])

HSP 1 Score: 533.9 bits (1374), Expect = 8.4e-148
Identity = 270/277 (97.47%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHG+ LLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFH MSAVEAPRGDS
Sbjct: 1   MVITYKYHGS-LLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHRMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGV D
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLD 120

Query: 121 VEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
            EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVA AVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of CSPI01G23570.1 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 4.2e-123
Identity = 226/228 (99.12%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGVPD EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATA 229
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVATA
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of CSPI01G23570.1 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo])

HSP 1 Score: 446.0 bits (1146), Expect = 2.3e-121
Identity = 224/228 (98.25%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGV D EMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATA 229
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVA A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of CSPI01G23570.1 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida])

HSP 1 Score: 435.3 bits (1118), Expect = 4.1e-118
Identity = 218/228 (95.61%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGD DPANPSS+ FRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDPDPANPSSVLFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGVPD EMGHFISE SSEVDLESGDLEVKVHLGKIERDCRICHLELES GGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISECSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVASQQINEPSNAVATA 229
            DTPIQLGCCCRGDLGTAHKQCAETWFKIKGNT CEICGATAQNVASQQINEPSNAVA A
Sbjct: 121 FDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           V SSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VPSSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of CSPI01G23570.1 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 84/172 (48.84%), Postives = 104/172 (60.47%), Query Frame = 0


Query: 109 GQFSGEIEGVPDVEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRD 168
           G    E E V D E     S  S E+DLE G  E  VHL + ERDCRICH+ L+++    
Sbjct: 34  GAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDAA--NL 93

Query: 169 NSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTTCEICGATAQNVAS--QQINEPSNAV 228
            S  PI+LGC C+ DL  AHK CAETWFKIKGN  CE+CG+ A NV    +  +E S   
Sbjct: 94  ESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNE 153

Query: 229 ATAVASSAL-TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
           A  V +  L T+   LVE R+ + G R +NFLLACM+ AF +SWLFHF + S
Sbjct: 154 ANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of CSPI01G23570.1 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33
Identity = 86/198 (43.43%), Postives = 109/198 (55.05%), Query Frame = 0


Query: 129 ESSSEVDLESGDL---EVKVHLG------------------KIERDCRICHLELESSGGR 188
           +S S+VDLESG +   E ++H G                  K  RDCRICHL LE++   
Sbjct: 35  DSLSQVDLESGGVPAPEKQLHSGGKKRRTRRRKRRKKKKKKKGGRDCRICHLPLETNKEA 94

Query: 189 DNSD-----------------------------TPIQLGCCCRGDLGTAHKQCAETWFKI 248
           ++ D                              P+QLGC C+GDLG AH +CAETWFKI
Sbjct: 95  EDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKI 154

Query: 249 KGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVETRTIFHGRRIMNFLL 277
           KGN TCEICGA A NVA +Q N  S A   + A++  +  LT  E R I+HGR +MNFLL
Sbjct: 155 KGNMTCEICGAMALNVAGEQSNPESTASTHSQAAAGQS--LTQTEPRGIWHGRPVMNFLL 214

[Close]

BLAST of CSPI01G23570.1 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-28
Identity = 83/212 (39.15%), Postives = 113/212 (53.30%), Query Frame = 0


Query: 74  RSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDVEMGHFISESSSE 133
           RS  GS   +   D  D  S +S F ST  GS+       E EG    ++   +S SSSE
Sbjct: 18  RSLDGSDVSVYYSDGEDVMSCYSYFYSTTGGSY-------EYEGDQSRKVSSVMSPSSSE 77

Query: 134 VDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAE 193
           +D +             E+DCRICHL +E+SGG       I+LGC C+ DL  AH+QCAE
Sbjct: 78  IDDDDA-------TAPPEKDCRICHLGVETSGG-----GAIELGCSCKDDLAVAHRQCAE 137

Query: 194 TWFKIKGNTTCEICGATAQNV--------ASQQINEPSNAVATAVASSALTAPLTLVETR 253
           TWFKIKG+ TCEIC + A+NV        ++ +  E  N   TA          T+VE R
Sbjct: 138 TWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELRNGEETAAGEG---GGATVVENR 197

Query: 254 TIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 278
             +  +R++N +LACM+  F +SW+FHF + S
Sbjct: 198 --WQPQRVVNLVLACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of CSPI01G23570.1 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.6e-27
Identity = 85/205 (41.46%), Postives = 103/205 (50.24%), Query Frame = 0


Query: 81  SDMSVLDDSD---DQSWHSVFDSTAWGSHGEGQFSGEIEGVPDVEMGHFISESSSEVDLE 140
           SD+S  D S    D  +HS   S          F GE E   D++      E+ +E  + 
Sbjct: 23  SDVSGEDSSSCDYDYDFHSAVRS----------FCGEFEIADDLD-----DETDTE-SVA 82

Query: 141 SGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFK 200
           SG +      G  E+DCRICHL LESS  R     P+ LGC C+ DLG  HKQCA+TWFK
Sbjct: 83  SGSIR-----GSPEKDCRICHLGLESS--RHECGDPMVLGCSCKDDLGYVHKQCADTWFK 142

Query: 201 IKGNTTCEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVET-----RTIFHGRR 260
           IKGN TCEIC + AQN            V T V         T+V T     R +  G R
Sbjct: 143 IKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNR 202

Query: 261 IMNFLLACMLLAFAMSWLFHFKLMS 278
            +NFLL CM+ AF +SW FHF L S
Sbjct: 203 FLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of CSPI01G23570.1 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-15
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 151 ERDCRICHLELESS---GGRDNSDTP--IQLGCCCRGDLGTAHKQCAETWFKIKGNTTCE 210
           ER CRICH   + S    G D S +P  I++GC C+ +LG AH  CAE WFK++GN+ CE
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCE 158

Query: 211 ICGATAQNV 215
           ICG TA+NV
Sbjct: 159 ICGCTAKNV 167

The following BLAST results are available for this feature:

BLAST of CSPI01G23570.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G23570.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0P0	1.6e-152	99.28	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52792...	[more]
A0A5D3BFF6	4.1e-148	97.47	E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C6R6	4.1e-148	97.47	uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C517	1.1e-121	98.25	uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HM49	4.5e-107	87.66	uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]

BLAST of CSPI01G23570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145266.2	3.3e-152	99.28	uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hy...	[more]
XP_008457414.1	8.4e-148	97.47	PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_011658411.1	4.2e-123	99.12	uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]	[more]
XP_008457415.1	2.3e-121	98.25	PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]	[more]
XP_038895035.1	4.1e-118	95.61	uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 unchara...	[more]

BLAST of CSPI01G23570.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	1.7e-34	48.84	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.5e-33	43.43	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	4.2e-28	39.15	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	4.6e-27	41.46	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	2.4e-15	53.62	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 153..208 e-value: 7.5E-16 score: 68.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 154..207 e-value: 6.6E-10 score: 39.0
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 146..214 score: 19.34767
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 144..219 e-value: 2.3E-15 score: 57.9
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 82..275
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 82..275
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 154..208 e-value: 5.98485E-13 score: 60.4188
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 151..211

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G23570	CSPI01G23570	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G23570.1.utr3p1	CSPI01G23570.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G23570.1.cds2	CSPI01G23570.1.cds2	CDS
CSPI01G23570.1.cds1	CSPI01G23570.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G23570.1.utr5p1	CSPI01G23570.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G23570.1	CSPI01G23570.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding