Tan0021431 (gene) Snake gourd v1

Overview
NameTan0021431
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG06: 1727603 .. 1727854 (+)
RNA-Seq ExpressionTan0021431
SyntenyTan0021431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCCCGGAAGGCACGATGCTGCCAGAAAGCGCAGGAGATCTTTCGATCTCTGTTTTTCATCCCCAGAACTACCATTGGAACGTGGGAAGTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGGCTGGGATCAGGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCCAAGTGAGCGATCGCTTTGGAGGTTGGCGTCGCTAA

mRNA sequence

ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCCCGGAAGGCACGATGCTGCCAGAAAGCGCAGGAGATCTTTCGATCTCTGTTTTTCATCCCCAGAACTACCATTGGAACGTGGGAAGTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGGCTGGGATCAGGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCCAAGTGAGCGATCGCTTTGGAGGTTGGCGTCGCTAA

Coding sequence (CDS)

ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCCCGGAAGGCACGATGCTGCCAGAAAGCGCAGGAGATCTTTCGATCTCTGTTTTTCATCCCCAGAACTACCATTGGAACGTGGGAAGTCTTTGAAAGAGATGGATTCAGAGAAGTTGAAGGCTGGGATCAGGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCCAAGTGAGCGATCGCTTTGGAGGTTGGCGTCGCTAA

Protein sequence

MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGIRKWAKAVVAYARQVSDRFGGWRR
Homology
BLAST of Tan0021431 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKKSLSLTKAEEAKR  RHDAARKRRRSFDLCFSSP+L +ERGKSLKEMDSEKLK+GI
Sbjct: 1  MSVKKSLSLTKAEEAKRSARHDAARKRRRSFDLCFSSPKLQMERGKSLKEMDSEKLKSGI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWRR 84
          RKWAK+VVAYARQVSDRFG WRR
Sbjct: 61 RKWAKSVVAYARQVSDRFGSWRR 83

BLAST of Tan0021431 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.0 bits (354), Expect = 4.7e-30
Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKKS SLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELP+E GKSLKEMDSEKLK  I
Sbjct: 1  MSVKKSFSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPMEYGKSLKEMDSEKLKDAI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWR 83
          RKWAKAVVAYAR VS+RFG  R
Sbjct: 61 RKWAKAVVAYARTVSNRFGSRR 82

BLAST of Tan0021431 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 4.0e-29
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKKSLSLTKAEEAKR  RH+AARKRRRSFDLCFS PELP+ERGKSLKEM+SEKLK GI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWRR 84
          +KWAKAVVAYAR VSDRFG  RR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of Tan0021431 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 6.8e-29
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKKSLSLTKAEEAKR  RH+AARKRRRSFDLCFS PE+P+ERGKSLKEM+SEKLK GI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWRR 84
          +KWAKAVVAYAR VSDRFG  RR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of Tan0021431 vs. NCBI nr
Match: PON96105.1 (hypothetical protein TorRG33x02_080350 [Trema orientale])

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14
Identity = 52/82 (63.41%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKK+LSL + E AK    H  +  RR  +  CFS  ELP+ERGK+LKEMDS KLK  I
Sbjct: 1  MSVKKTLSLNRGEAAK---GHQIS-VRRGKYGRCFSFVELPMERGKTLKEMDSNKLKFEI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWR 83
          ++WAKAVVAYARQVS RFGG R
Sbjct: 61 KRWAKAVVAYARQVSGRFGGTR 78

BLAST of Tan0021431 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKKSLSLTKAEEAKR  RH+AARKRRRSFDLCFS PELP+ERGKSLKEM+SEKLK GI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWRR 84
          +KWAKAVVAYAR VSDRFG  RR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of Tan0021431 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-29
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKKSLSLTKAEEAKR  RH+AARKRRRSFDLCFS PE+P+ERGKSLKEM+SEKLK GI
Sbjct: 1  MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWRR 84
          +KWAKAVVAYAR VSDRFG  RR
Sbjct: 61 KKWAKAVVAYARTVSDRFGSRRR 83

BLAST of Tan0021431 vs. ExPASy TrEMBL
Match: A0A2P5FE88 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.1e-15
Identity = 52/82 (63.41%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 1  MSVKKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGI 60
          MSVKK+LSL + E AK    H  +  RR  +  CFS  ELP+ERGK+LKEMDS KLK  I
Sbjct: 1  MSVKKTLSLNRGEAAK---GHQIS-VRRGKYGRCFSFVELPMERGKTLKEMDSNKLKFEI 60

Query: 61 RKWAKAVVAYARQVSDRFGGWR 83
          ++WAKAVVAYARQVS RFGG R
Sbjct: 61 KRWAKAVVAYARQVSGRFGGTR 78

BLAST of Tan0021431 vs. ExPASy TrEMBL
Match: A0A498IZM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.9e-15
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 0

Query: 4   KKSLSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPLERGKSLKEMDSEKLKAGIRKW 63
           +K+LSL   E  K  G  D    +R  FD CFS  E+  E GKSLKEMDSEKLK+GI++W
Sbjct: 25  RKTLSLNNGEAGKSSG--DVVAAKRTRFDRCFSFMEVSTEPGKSLKEMDSEKLKSGIKRW 84

Query: 64  AKAVVAYARQVSDRFGGWR 83
           AKAVVAYARQVSDRFG  R
Sbjct: 85  AKAVVAYARQVSDRFGSSR 101

BLAST of Tan0021431 vs. ExPASy TrEMBL
Match: A0A5E4F872 (PREDICTED: PHAVU_010G142400g OS=Prunus dulcis OX=3755 GN=ALMOND_2B014602 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.9e-15
Identity = 55/98 (56.12%), Postives = 63/98 (64.29%), Query Frame = 0

Query: 1  MSVKKSLSL--------------TKAEEAKRPGRH--DAARKRRRSFDLCFSSPELPLER 60
          MSVKKSLSL              TK   +   G +  D    +RR FD CFS  E+  E+
Sbjct: 1  MSVKKSLSLNNGGAGMGGASTKKTKKSYSLNNGGNGGDVVTAKRRRFDRCFSFMEISTEQ 60

Query: 61 GKSLKEMDSEKLKAGIRKWAKAVVAYARQVSDRFGGWR 83
          GKSLK+MDSEKLK+GIR+WAKAVVAYARQVS RFGG R
Sbjct: 61 GKSLKDMDSEKLKSGIRRWAKAVVAYARQVSGRFGGTR 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6593505.12.3e-3290.36hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575488.14.7e-3089.02hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0059447.14.0e-2986.75hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK038... [more]
KGN45542.16.8e-2985.54hypothetical protein Csa_016865 [Cucumis sativus][more]
PON96105.11.3e-1463.41hypothetical protein TorRG33x02_080350 [Trema orientale][more]
Match NameE-valueIdentityDescription
A0A5A7UXU01.9e-2986.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KB033.3e-2985.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1[more]
A0A2P5FE886.1e-1563.41Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV... [more]
A0A498IZM57.9e-1562.03Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1[more]
A0A5E4F8727.9e-1556.12PREDICTED: PHAVU_010G142400g OS=Prunus dulcis OX=3755 GN=ALMOND_2B014602 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR36484:SF2OS01G0558700 PROTEINcoord: 1..82
NoneNo IPR availablePANTHERPTHR36484OS01G0558700 PROTEINcoord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0021431.1Tan0021431.1mRNA