Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTAAAGTTAGCACTTGTATTCCTAATTTTCATAGCTATTATTTTATCACCACCAACGATGGCCCAAACCACGGCGGCATTAGCAGCAGCACCTAGTACTCCATCATCATTAATAGAAGATATCTCCTTCAAGAGATGTGCACCCTTGATTTTAGAGGCGACCATGTGTGTGGCAGATATCATCAAGTTTCCAATCTCTTCTCATCCTGCTTGTTGCAAAGCCTTTTTTAAGATCAACGATTGTGACCCCAACTTTCTCAAACACATTTCTCCTGCTCATTTGAATTTGATTAAGAAGATTTGTGATTTTTGA
mRNA sequence
ATGGCCGTAAAGTTAGCACTTGTATTCCTAATTTTCATAGCTATTATTTTATCACCACCAACGATGGCCCAAACCACGGCGGCATTAGCAGCAGCACCTAGTACTCCATCATCATTAATAGAAGATATCTCCTTCAAGAGATGTGCACCCTTGATTTTAGAGGCGACCATGTGTGTGGCAGATATCATCAAGTTTCCAATCTCTTCTCATCCTGCTTGTTGCAAAGCCTTTTTTAAGATCAACGATTGTGACCCCAACTTTCTCAAACACATTTCTCCTGCTCATTTGAATTTGATTAAGAAGATTTGTGATTTTTGA
Coding sequence (CDS)
ATGGCCGTAAAGTTAGCACTTGTATTCCTAATTTTCATAGCTATTATTTTATCACCACCAACGATGGCCCAAACCACGGCGGCATTAGCAGCAGCACCTAGTACTCCATCATCATTAATAGAAGATATCTCCTTCAAGAGATGTGCACCCTTGATTTTAGAGGCGACCATGTGTGTGGCAGATATCATCAAGTTTCCAATCTCTTCTCATCCTGCTTGTTGCAAAGCCTTTTTTAAGATCAACGATTGTGACCCCAACTTTCTCAAACACATTTCTCCTGCTCATTTGAATTTGATTAAGAAGATTTGTGATTTTTGA
Protein sequence
MAVKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVADIIKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKICDF
Homology
BLAST of Tan0019472 vs. NCBI nr
Match:
KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])
HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 0
Query: 2 AVKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVAD 61
A+KL LVFL+ IAI+ TMA TTAA A +PS P ++ F +CAP ILEAT+CV D
Sbjct: 10 AMKLVLVFLVCIAILAPSTTMADTTAA-APSPSVP----QNFPFLKCAPFILEATLCVTD 69
Query: 62 IIKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
+IKFPI+ HP+CCKA K+NDC P + I +++IKKIC
Sbjct: 70 VIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKIC 106
BLAST of Tan0019472 vs. NCBI nr
Match:
TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 97.4 bits (241), Expect = 7.6e-17
Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVADI 62
+KL LVFL+ IAI+ TMA TTAA A +PS P ++ F +CAP ILEAT+CV +
Sbjct: 1 MKLVLVFLVCIAILAPSTTMAGTTAA-APSPSVP----QNFPFLKCAPFILEATLCVTGV 60
Query: 63 IKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
IKFPI+ HP+CCKA K+ DC P+ + I + +N+IKK C
Sbjct: 61 IKFPIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTC 96
BLAST of Tan0019472 vs. NCBI nr
Match:
KAA0050072.1 (hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK10333.1 hypothetical protein E5676_scaffold367G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 91.3 bits (225), Expect = 5.4e-15
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVADI 62
+K A VF++ IAI+ + T +T ++ P S+ +++SF CAP I + T+C+ D+
Sbjct: 11 IKSASVFIVSIAILAASVTAGRTVSSTTLDP----SMSQNLSFFSCAPFIFDVTLCLVDV 70
Query: 63 IKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
KFPIS HP CCKA FK+NDC P + I PA +++IKKIC
Sbjct: 71 FKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKIC 107
BLAST of Tan0019472 vs. NCBI nr
Match:
KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])
HSP 1 Score: 90.5 bits (223), Expect = 9.3e-15
Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVADI 62
+KLALVF++ IAI+ + T +T + ++ + S+ +D+SF C P IL+AT+C+ D+
Sbjct: 8 MKLALVFIVSIAILAASATAGRT---VVSSTTLDPSISQDLSFFSCTPFILDATLCLVDV 67
Query: 63 IKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
KFPI+ HP CCKA FK+NDC P + I A ++++K IC
Sbjct: 68 FKFPIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDVVKNIC 105
BLAST of Tan0019472 vs. NCBI nr
Match:
TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLI-EDISFKRCAPLILEATMCVAD 62
++LALVFL+ I +IL+P A T +A APS L+ +D SF CAP ILEATMC+ D
Sbjct: 12 IRLALVFLVCI-VILAPSVTAHT---MAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVD 71
Query: 63 IIKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
+IK P++ HP+CCKA +NDC P +HI +++IKKIC
Sbjct: 72 VIKLPVAPHPSCCKAISDLNDCAPEIYQHI--PGMDVIKKIC 107
BLAST of Tan0019472 vs. ExPASy TrEMBL
Match:
A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 6.7e-19
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 0
Query: 2 AVKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVAD 61
A+KL LVFL+ IAI+ TMA TTAA A +PS P ++ F +CAP ILEAT+CV D
Sbjct: 10 AMKLVLVFLVCIAILAPSTTMADTTAA-APSPSVP----QNFPFLKCAPFILEATLCVTD 69
Query: 62 IIKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
+IKFPI+ HP+CCKA K+NDC P + I +++IKKIC
Sbjct: 70 VIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKIC 106
BLAST of Tan0019472 vs. ExPASy TrEMBL
Match:
A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 3.7e-17
Identity = 52/101 (51.49%), Postives = 69/101 (68.32%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVADI 62
+KL LVFL+ IAI+ TMA TTAA A +PS P ++ F +CAP ILEAT+CV +
Sbjct: 1 MKLVLVFLVCIAILAPSTTMAGTTAA-APSPSVP----QNFPFLKCAPFILEATLCVTGV 60
Query: 63 IKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
IKFPI+ HP+CCKA K+ DC P+ + I + +N+IKK C
Sbjct: 61 IKFPIAPHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTC 96
BLAST of Tan0019472 vs. ExPASy TrEMBL
Match:
A0A0A0LTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 2.0e-15
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLI--EDISFKRCAPLILEATMCVA 62
++LA+VFL+ I +IL+P A+T +A APS L +D SF CAP ILEATMCV
Sbjct: 12 IRLAIVFLVCI-VILAPSVTART---MAEAPSPVLVLFDEDDSSFSNCAPFILEATMCVV 71
Query: 63 DIIKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
D+IK P++SHP+CCKA +NDC P +HI +++IKKIC
Sbjct: 72 DVIKLPVASHPSCCKAISDLNDCAPQIYQHI--PDMDVIKKIC 108
BLAST of Tan0019472 vs. ExPASy TrEMBL
Match:
A0A5A7U2L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00060 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 2.6e-15
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLIEDISFKRCAPLILEATMCVADI 62
+K A VF++ IAI+ + T +T ++ P S+ +++SF CAP I + T+C+ D+
Sbjct: 11 IKSASVFIVSIAILAASVTAGRTVSSTTLDP----SMSQNLSFFSCAPFIFDVTLCLVDV 70
Query: 63 IKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
KFPIS HP CCKA FK+NDC P + I PA +++IKKIC
Sbjct: 71 FKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKIC 107
BLAST of Tan0019472 vs. ExPASy TrEMBL
Match:
A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.0e-14
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 0
Query: 3 VKLALVFLIFIAIILSPPTMAQTTAALAAAPSTPSSLI-EDISFKRCAPLILEATMCVAD 62
++LALVFL+ I +IL+P A T +A APS L+ +D SF CAP ILEATMC+ D
Sbjct: 12 IRLALVFLVCI-VILAPSVTAHT---MAEAPSPLLVLLDQDSSFSNCAPFILEATMCMVD 71
Query: 63 IIKFPISSHPACCKAFFKINDCDPNFLKHISPAHLNLIKKIC 104
+IK P++ HP+CCKA +NDC P +HI +++IKKIC
Sbjct: 72 VIKLPVAPHPSCCKAISDLNDCAPEIYQHI--PGMDVIKKIC 107
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0050069.1 | 1.4e-18 | 53.92 | hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... | [more] |
TYK10334.1 | 7.6e-17 | 51.49 | hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa] | [more] |
KAA0050072.1 | 5.4e-15 | 44.55 | hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK1033... | [more] |
KAE8653023.1 | 9.3e-15 | 43.56 | hypothetical protein Csa_023561, partial [Cucumis sativus] | [more] |
TYK10344.1 | 2.1e-14 | 50.00 | hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U9A1 | 6.7e-19 | 53.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CGK9 | 3.7e-17 | 51.49 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LTD6 | 2.0e-15 | 50.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1 | [more] |
A0A5A7U2L3 | 2.6e-15 | 44.55 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CGL7 | 1.0e-14 | 50.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |