Tan0019447 (gene) Snake gourd v1

Overview


Name	Tan0019447
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	E3 ubiquitin-protein ligase
Location	LG11: 3323558 .. 3328875 (+)
RNA-Seq Expression	Tan0019447
Synteny	Tan0019447

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAATTAGAGCATTCTATCCAACCAAACCATCATAGCAAAGAAGATACCGGCAGCGCGAGATAGAGATACAGAGGGAAGAGGGCAGCTTTATTTTCGCGGAATTCGTAGCTTTCGTTTCATCGCCTTCAATTCCTTTTCCAATCCAAACGCCCCTTAAAATGCGCAATCTCGATTTAGCTTGAAATTCCAATTATCTTTGTGCGTGATTTTTCCCAAAAAGCGCATGTATATAATTTCCGCATATTCTCCCAATTTCCTACTTACAGGTTTCTCTGTCCTCCACCCACCCACCCACCCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTCTCAAGGTACTTCTATTTTTCTCCTTTATTCAACTATTCTCTTTGTCCCCGGGATCCTTTTTGGTGATGGGCATCCTGATGATCGCGCCAAATTTTGATTGTCCTGTATTGGGTCTCTTAATTGTTTCATGATTTGTATGAATTCGTGGTCCGATCGTCTATTTGTTGAGTTTTTTCTTATGGGATTGTCGTATATTTTGAATAGTTTTTCTCTTGTTCGATACCCCTTATTCTTCACATTGGATGAGTTATGTATGTCCTGGATGATGATGACCAGCTTGGTTTGCTATTGATGTTGTATTCGTATCTTGTTTCCTCATTATCGAAGGAAAGAATCCGTGTTTTCAGAGGTGGCCCAGAAAAAAAAATCTCAATTTGGTGCGATAAGCGGGTAATTTTGACCGAAGATTATGGCATTTGATTAACCCTTGTACTTATTTTTGGCTGGTTCAACAATTTTTTCTTTCATTGTTGTGATTATTGTGGTTTCGGATTGCTACCGACAGATTCATGTTCCTTGAAATAATGCCGATTGTTGGTTTAATATATGATCTTAGTAGGATTTTTTATTTGACTTGCTTTCTTGGTGATCACATTGGTATTTATGCATCACAGTTACTTTGAGGAGAATCCCTTTGGATCCCCATTTCATTAAGAGTTTTACTGAACATAGGCTCTTATTTTACAGGTGAAAATCACAGTATAAAAAATCCAGTTTTGAAGAAGGAGGGTACTGGTTCGTGGAGGCAATAGTACTTCTGCGAGCTTATGTACTCTCGTCTCCATTTGCCTGCATAATCATTGGCCAAGAACTCTCCATTTGAATGCAAGTGAATAGCTAAATTGAGCTATCTGTTGACTTGAGAATCTGCTGGATTAGATAATTGAGAATTATAAAGAGATTGGTTGAAGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGTGTGGAGGATTTTGAAGACTATGTCAATCCTAATAGTTCAGTGTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAATGCTGTAAGCCCTATTTCCATTGCATTATATCTCAGGTTATTTTGCGATTAGTCACTATGAAGGATGAAAATATCAGTATTCATGCATATATATATCAGCAATGAGGTTTTGTTTGAATGTTAATATTGGTGAAAATTTGAAGAAAATTTTCTAAGTTAGAAACAAAATATATTTTGAATATTAATACTCCTTCATATTTTGATGTTTATACAGTATTAAAGTCCAGAGTTGAGTAATCTTTTCCCTGAAAAATTGATGGTGAAAATTGGAATTACAAATATTAGGAGGGAAATGTGACATTAATGTTACTTACTTCCTTGTATGCCATATTATTGTGTTGTTTGTTTGCATTTGTATCTTTCCATATTTCCTACCCAAATTATTGCTCTTGCTTTATGATGTGTGGGTAAATATATAAAATCCATAACCCACATCAAGTTGTAGTCTTTTTATGGAAAAGCACTTGTAATTTGTTTCAAGCGTCAGAAGTGTTTAGCTGTAGCTAGTGACTTTATTCTCAAGATAATTGTATGACTCTGTTTTCCCTCTTATTTTCTCTAGTACACGTTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCTATGAATTCTTCAGCATCAATAGATAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCGTTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAGGAATCAGAACCTCTAAGAAGTGAAGCAGATACAGATTCAGATTCTATGGGCTCGGCAGGAAAATGGAATGGATCTGCTTGTCTCGAGGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGGTTGATTTATTTAATTAACTTCATTTTATCATGGATTTTATTTTATTGCTTATGAAAATCTATGGTTTTGGTCCTCAATATTCTTGTTTTTGAAGCTTCTGGGTGACAAACAAGTTACTGATCCACACACTTTTGAGCATGCCAAAATTTCATTCTGCTCGTTAAATTGTCTTCTTTTTCCAAGCAGAATATACTTCAGAGAATCCCAAGATAGTGACAAAATGCTCTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTATGGCTCTTTTCTCCATCATATCATATGAAACTCGTTCAATCACTATCTCAAAGCCACCCTATTGGTTGCATTCAAGTGTCCGACTCAGATTGATATTTGGATCTTTTTATGATCTGGAAGTTCTGTGTTTCAGAAGCATTCCTATGGTTTGGAAAAAAATATGACTTTATGATTTGATGCTATTGATTTTAAGATTTTTTTTTGTTTTTTAATATGGATTGGGCATAAGGACCATTCTGGATGTGCAAAATCATCGCGGTTCTTTCAGAAATTGAAAAAACGTCTGGTTAACATAGATGATCTAGTATATGATTCATTTATTTATGTCTATCCTATCCTTGGTCATCTTTGCTTGGAGTCGACGGATTAAGTTATGTCAGAATAACTCCTATAAGAAAACTTCTAGAACATCAGAAGTTTAAGAGAATACATCATCTTTTTCTCTATCCTCCTTAAAATGGGATTAGTCGATTTCATTTTTTGTTTTTGTTGACAACCTGAGGGCCCCCACGCTAATCTGGGGGCACCTACGCTTGCCCCTAGGCTTGAAACTCCAGGAGACACCGAGGGTTTTTCCTACTCAAAGATCCAAACATGTGACCTTTGGGTAGGTGTTATTCAGAGATCGCATGCCCCTTGGGCACTAGTTGATCTCATTTTGACATCAATGTTTATGCTATTTTAGAATAAGATGACATGTTAACGTGGTAACATTTGAAACTCTAAATAATTAAACTTATATAACAGTACATGACCACACCATTTTGTGATATTCAATTGATTGGGTAGTGCATCGGAAATTTATGGTATAATAACTAATGTTTTTTTCCCGTGTCCTTCACTGGTAAAGCTTTGGGAAACGACCTTCATACGAAACATGATCCTTAGATGCTCATCTAAATATAAAATGGCATATTGCATGGTATAAAATCATTCCTTGTTGATGGTATTCTAGTGATCCCAAATCATATTAGAGGTGGAATTAGCTTTTTAAGTTTGTTGCTTAACTAAATTGTACCAGCTAAGCAATTAAACATTTGGATGTAAGGTGAATAATCTTCAGTTTTTATGCAACCCTTTATTTACTTCTGATGGTACATTGAGTCCTCTGATTAATTCATGCAGTATGAACCTTAGTACTGTCACTTGGCTACGATATTTGACAGTAGAAAACTGGTGGAATGTTGAGTACCACATGTTTAAATAAGATTTATCTTTCTAATGATGTTTTTACAGCAGATATGATTTTCAACTGAATCTGAACTGATTTTAAAGAGGTAGACAAATTTTAAATAGGACGAGAAGCCATTGTCTAAAAACCCTGTATTTGAGACCACGGGGAAAGGGAGGTTATCTTTTGGTTTTAGAACTATTGGGGCTCTTTCTCCTCAAACGACCCTGCCATTTTCTGGCTATTGCTGTTCTTTTATTTGCTTGGGGAGATGTATTTTTCTTCTCTGATATAGTTTTCTTTCCTACATATTAGTTATTTCGTTTAGTATTCTTTTTCATAAGTACAGAGATGTAATGTAATTAGCTGTTTTATAAGGATCAAATTGGTTATTCATTGTTTTTGGCATGAGTTTTGTTGGAGTCAATTCTTTTACTACAAAGAAGTTGTTCGTAATGGAGAATCTTTTTTACTCGTCATTAAAACCATAGTTTAAAAAAACTTAGGGAAGACCATTGATTCTTAGTATTTATATAGGTTTGTGAACTCATTATCACCTGTTTGAATTCAAGGGCCATTGGTATGATGCATCACACTTGGGTTTAGAGGACGACAATGCCCCCATTTAGACATTCCTAGTTTATCCAGCTAATCTTGTCCCCTAACATTTGAGGATAAAGGCTAGAGCTTATTGTTGTAATGTTGTACATTGATCAATCTTTCAAACAGTTGGTGCTGAAGCCTTATTATTAGCTAATCCATAGGGTTTCAATAAATTACATAATTCTCAATTTGATCTGTTTATAAAACAAGAAGTCCAGAACCTTGAAAACACAGTCCACCAAGGAATTTAATTTGATCAAATTCTGCAGAGATGACATTTTTTAAAAAAATCTGGGTTTGAGTTCTGAGTCTTTTGATGAGCTGATTGACACTAGCATGGATTATTTGATTTGTAAACTGGGAAGGAAACAGCCTTAACATGTTTGGATGGGTTTCATTAACTTTTATTTCATACCACTATTTTAATATTGTAGGTAATGGCATTCGATGAAACGACTTGATGTTCGTGTCGCGGATGAAGCCAGCAGCACCTTGGGCATAACCAGCAGGAACCATGGTCATTTGTGAATATTGCAGGATAAGATTTTTCAACCTAGTAAATATTATGAATGAAAGTATAACCAAGGTTGGATCCATCTGTTTCCTCTCTCTCTCTCTTTTTTCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAAACTGATGTTTCACCAAAATATCATCTTATAGGGGAAGAAAAAATAGGTGTTGTGAATGACTGAGAAATCTTTCCATTCCATGTTTGGTGTATCTACCTGTGTTCTTTCTTTTTTCTTCTCATGGAAGTAAAATATGATCACCTTTCAACCATCTCTTCTTCTTCTGGAAGAAAAAGAAATGAGCTAAAATTTTACTCTCACGA

mRNA sequence

ATTAAATTAGAGCATTCTATCCAACCAAACCATCATAGCAAAGAAGATACCGGCAGCGCGAGATAGAGATACAGAGGGAAGAGGGCAGCTTTATTTTCGCGGAATTCGTAGCTTTCGTTTCATCGCCTTCAATTCCTTTTCCAATCCAAACGCCCCTTAAAATGCGCAATCTCGATTTAGCTTGAAATTCCAATTATCTTTGTGCGTGATTTTTCCCAAAAAGCGCATGTATATAATTTCCGCATATTCTCCCAATTTCCTACTTACAGGTTTCTCTGTCCTCCACCCACCCACCCACCCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTCTCAAGGTGAAAATCACAGTATAAAAAATCCAGTTTTGAAGAAGGAGGGTACTGGTTCGTGGAGGCAATAGTACTTCTGCGAGCTTATGTACTCTCGTCTCCATTTGCCTGCATAATCATTGGCCAAGAACTCTCCATTTGAATGCAAGTGAATAGCTAAATTGAGCTATCTGTTGACTTGAGAATCTGCTGGATTAGATAATTGAGAATTATAAAGAGATTGGTTGAAGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGTGTGGAGGATTTTGAAGACTATGTCAATCCTAATAGTTCAGTGTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAATGCTTACACGTTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCTATGAATTCTTCAGCATCAATAGATAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCGTTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAGGAATCAGAACCTCTAAGAAGTGAAGCAGATACAGATTCAGATTCTATGGGCTCGGCAGGAAAATGGAATGGATCTGCTTGTCTCGAGGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACTTCAGAGAATCCCAAGATAGTGACAAAATGCTCTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTAATGGCATTCGATGAAACGACTTGATGTTCGTGTCGCGGATGAAGCCAGCAGCACCTTGGGCATAACCAGCAGGAACCATGGTCATTTGTGAATATTGCAGGATAAGATTTTTCAACCTAGTAAATATTATGAATGAAAGTATAACCAAGGTTGGATCCATCTGTTTCCTCTCTCTCTCTCTTTTTTCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAAACTGATGTTTCACCAAAATATCATCTTATAGGGGAAGAAAAAATAGGTGTTGTGAATGACTGAGAAATCTTTCCATTCCATGTTTGGTGTATCTACCTGTGTTCTTTCTTTTTTCTTCTCATGGAAGTAAAATATGATCACCTTTCAACCATCTCTTCTTCTTCTGGAAGAAAAAGAAATGAGCTAAAATTTTACTCTCACGA

Coding sequence (CDS)

ATGGGTGCTGTCTGCTGCTGTTTGAGTGTGGAGGATTTTGAAGACTATGTCAATCCTAATAGTTCAGTGTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAATGCTTACACGTTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCTATGAATTCTTCAGCATCAATAGATAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCGTTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAGGAATCAGAACCTCTAAGAAGTGAAGCAGATACAGATTCAGATTCTATGGGCTCGGCAGGAAAATGGAATGGATCTGCTTGTCTCGAGGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACTTCAGAGAATCCCAAGATAGTGACAAAATGCTCTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTAATGGCATTCGATGAAACGACTTGA

Protein sequence

MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGATSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT

Homology

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BLAST of Tan0019447 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.6e-75
Identity = 147/234 (62.82%), Postives = 172/234 (73.50%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   NFLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            S+ SS+S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLRS
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EADTDSDSMGSAG-KW-NGSACL--EESKENL-GKSSLKFPSTKSTTGVGYA---YTSSE 180
           ++D DS+S G  G KW N  + L  ++SKE    KSSL+   ++S + +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 227
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F+ET
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230

[Close]

BLAST of Tan0019447 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 124 TDSDSMGSAGKWNGSAC-LEESKENLGKSSLKFPSTK---------STTGVGYAYTSSED 183
           TDS+S+   G+ +GS+     + E+LG+S  K  ++           +   G      E+
Sbjct: 78  TDSESI--KGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKILVDEE 137

Query: 184 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDE 226
           ED CP C E+Y  ENP++ TKC H FHL C+ EW+ERSD CP+C K + FD+
Sbjct: 138 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Tan0019447 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 175 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 227
           D CP CLEEY  +NPK++TKC H FHL CI  WMERS+ CPVC K +   E+
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTES 153

[Close]

BLAST of Tan0019447 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09
Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 0


Query: 147 NLGKSSLKFPSTKSTTGVGYAYTSSED-----EDVCPTCLEEYTSENPKIVTKCSHHFHL 206
           NL  +S   P+  S++    A   + D     +D C  CLE +T ++P  VT C H +HL
Sbjct: 11  NLSDNSPFNPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHL 70

Query: 207 GCIYEWMERSDNCPVC 218
            CI EW +RS  CP+C
Sbjct: 71  QCIIEWSQRSKECPIC 86

[Close]

BLAST of Tan0019447 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.9e-09
Identity = 21/54 (38.89%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 174 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           +D C  CLE +   +P  +T C H +HL CI EW +RS  CP+C + ++  + T
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPT 83

[Close]

BLAST of Tan0019447 vs. NCBI nr
Match: XP_008459404.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 455.7 bits (1171), Expect = 2.4e-124
Identity = 218/227 (96.04%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDSDS+GSAGKWNGSACLEESKENLGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]

BLAST of Tan0019447 vs. NCBI nr
Match: XP_038889911.1 (E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida])

HSP 1 Score: 454.1 bits (1167), Expect = 6.9e-124
Identity = 217/227 (95.59%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQ+FL+AYTLIFRRGEVHSVSSSIQG 
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLSAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           + DTDSDS+GSAGKWNGSACLEESKENLGKSSLKFPSTKSTTG+GYAYTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 227

[Close]

BLAST of Tan0019447 vs. NCBI nr
Match: XP_004141476.1 (E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus] >KGN52530.1 hypothetical protein Csa_009250 [Cucumis sativus])

HSP 1 Score: 448.7 bits (1153), Expect = 2.9e-122
Identity = 216/227 (95.15%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDSDS+GS GK NGSACLEESKENLGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]

BLAST of Tan0019447 vs. NCBI nr
Match: XP_022954554.1 (E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954569.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_023548844.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548852.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548861.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548868.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >KAG6602542.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447.2 bits (1149), Expect = 8.4e-122
Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSM+S++S DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDSDS+GSAGKWNGSACL+ESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 227

[Close]

BLAST of Tan0019447 vs. NCBI nr
Match: XP_022134111.1 (E3 ubiquitin-protein ligase At3g02290 [Momordica charantia] >XP_022134112.1 E3 ubiquitin-protein ligase At3g02290 [Momordica charantia])

HSP 1 Score: 446.4 bits (1147), Expect = 1.4e-121
Identity = 212/227 (93.39%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVED+EDYVNPNSS+YRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQG 
Sbjct: 1   MGAVCCCLSVEDYEDYVNPNSSLYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E D DSDS+ + GKWNGSACL+ESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC
Sbjct: 121 EVDADSDSLDTPGKWNGSACLDESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKI+T+CSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Sbjct: 181 LEEYTSENPKIMTQCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 227

[Close]

BLAST of Tan0019447 vs. ExPASy TrEMBL
Match: A0A1S3CA28 (E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.1e-124
Identity = 218/227 (96.04%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDSDS+GSAGKWNGSACLEESKENLGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]

BLAST of Tan0019447 vs. ExPASy TrEMBL
Match: A0A0A0KSH8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.4e-122
Identity = 216/227 (95.15%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDSDS+GS GK NGSACLEESKENLGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]

BLAST of Tan0019447 vs. ExPASy TrEMBL
Match: A0A6J1GR85 (E3 ubiquitin-protein ligase At3g02290 OS=Cucurbita moschata OX=3662 GN=LOC111456789 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.1e-122
Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSM+S++S DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDSDS+GSAGKWNGSACL+ESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 227

[Close]

BLAST of Tan0019447 vs. ExPASy TrEMBL
Match: A0A6J1BYQ7 (E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC111006466 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.0e-122
Identity = 212/227 (93.39%), Postives = 221/227 (97.36%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVED+EDYVNPNSS+YRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQG 
Sbjct: 1   MGAVCCCLSVEDYEDYVNPNSSLYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGT 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNS+AS DNSLSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E D DSDS+ + GKWNGSACL+ESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC
Sbjct: 121 EVDADSDSLDTPGKWNGSACLDESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKI+T+CSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Sbjct: 181 LEEYTSENPKIMTQCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 227

[Close]

BLAST of Tan0019447 vs. ExPASy TrEMBL
Match: A0A6J1JPB8 (E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487128 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121
Identity = 211/227 (92.95%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSM+S++S DNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 EADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           E DTDS+S+GSAGKWNGSACL+ESKENLGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSESLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 228
           LEEYTSENPKI+TKC HHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Sbjct: 181 LEEYTSENPKILTKCCHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 227

[Close]

BLAST of Tan0019447 vs. TAIR 10
Match: AT3G02290.1 (RING/U-box superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 2.6e-76
Identity = 147/234 (62.82%), Postives = 172/234 (73.50%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   NFLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            S+ SS+S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLRS
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EADTDSDSMGSAG-KW-NGSACL--EESKENL-GKSSLKFPSTKSTTGVGYA---YTSSE 180
           ++D DS+S G  G KW N  + L  ++SKE    KSSL+   ++S + +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 227
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F+ET
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230

[Close]

BLAST of Tan0019447 vs. TAIR 10
Match: AT5G15790.1 (RING/U-box superfamily protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.4e-74
Identity = 141/232 (60.78%), Postives = 166/232 (71.55%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  V+DFEDY NP+SSV R+C C  C + NFLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60

Query: 61  -TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 120
             S+ +S S DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPLR
Sbjct: 61  NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120

Query: 121 SEADTDSDSMGSAG-KWNGSACL--EESKENLGKSSLKF--PSTKSTTGVGYAYTSSEDE 180
           S+AD DS+S    G KW     +  E+SKE   +SS +     T ST+  G  Y +S+DE
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDDE 180

Query: 181 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 227
           DVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F ET
Sbjct: 181 DVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231

[Close]

BLAST of Tan0019447 vs. TAIR 10
Match: AT5G15790.2 (RING/U-box superfamily protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.4e-74
Identity = 141/232 (60.78%), Postives = 166/232 (71.55%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  V+DFEDY NP+SSV R+C C  C + NFLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60

Query: 61  -TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 120
             S+ +S S DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPLR
Sbjct: 61  NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120

Query: 121 SEADTDSDSMGSAG-KWNGSACL--EESKENLGKSSLKF--PSTKSTTGVGYAYTSSEDE 180
           S+AD DS+S    G KW     +  E+SKE   +SS +     T ST+  G  Y +S+DE
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDDE 180

Query: 181 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 227
           DVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F ET
Sbjct: 181 DVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231

[Close]

BLAST of Tan0019447 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 3.5e-73
Identity = 127/226 (56.19%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+Q+F++ Y  +F RG +H + S+++ A
Sbjct: 1   MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 60

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           T MNS+ ++D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLR 
Sbjct: 61  TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 120

Query: 121 EADTDSDSMGSAG-KWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPT 180
           + +  S+++G  G KW+ S   + SKE   K S  F  +K+  G+   Y  S+DED+CPT
Sbjct: 121 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 180

Query: 181 CLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDE 226
           CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKVMAFDE
Sbjct: 181 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 217

[Close]

BLAST of Tan0019447 vs. TAIR 10
Match: AT5G38895.3 (RING/U-box superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 3.5e-73
Identity = 127/226 (56.19%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+Q+F++ Y  +F RG +H + S+++ A
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165

Query: 61  TSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           T MNS+ ++D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLR 
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 225

Query: 121 EADTDSDSMGSAG-KWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPT 180
           + +  S+++G  G KW+ S   + SKE   K S  F  +K+  G+   Y  S+DED+CPT
Sbjct: 226 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 285

Query: 181 CLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDE 226
           CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKVMAFDE
Sbjct: 286 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 322

The following BLAST results are available for this feature:

BLAST of Tan0019447 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LE94	3.6e-75	62.82	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q2HIJ8	1.4e-15	39.29	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q93ZF6	2.7e-14	59.62	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
Q4TU14	3.4e-09	38.16	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	5.9e-09	38.89	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]

BLAST of Tan0019447 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459404.1	2.4e-124	96.04	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo]	[more]
XP_038889911.1	6.9e-124	95.59	E3 ubiquitin-protein ligase At3g02290 [Benincasa hispida]	[more]
XP_004141476.1	2.9e-122	95.15	E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus] >KGN52530.1 hypothetical...	[more]
XP_022954554.1	8.4e-122	93.83	E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ub...	[more]
XP_022134111.1	1.4e-121	93.39	E3 ubiquitin-protein ligase At3g02290 [Momordica charantia] >XP_022134112.1 E3 u...	[more]

BLAST of Tan0019447 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CA28	1.1e-124	96.04	E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE...	[more]
A0A0A0KSH8	1.4e-122	95.15	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 P...	[more]
A0A6J1GR85	4.1e-122	93.83	E3 ubiquitin-protein ligase At3g02290 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A6J1BYQ7	7.0e-122	93.39	E3 ubiquitin-protein ligase At3g02290 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1JPB8	2.6e-121	92.95	E3 ubiquitin-protein ligase At3g02290 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Tan0019447 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02290.1	2.6e-76	62.82	RING/U-box superfamily protein	[more]
AT5G15790.1	1.4e-74	60.78	RING/U-box superfamily protein	[more]
AT5G15790.2	1.4e-74	60.78	RING/U-box superfamily protein	[more]
AT5G38895.1	3.5e-73	56.19	RING/U-box superfamily protein	[more]
AT5G38895.3	3.5e-73	56.19	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..168
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..182
None	No IPR available	PANTHER	PTHR46463:SF43	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019447.2	Tan0019447.2	mRNA
Tan0019447.3	Tan0019447.3	mRNA
Tan0019447.1	Tan0019447.1	mRNA
Tan0019447.4	Tan0019447.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding