Tan0018993 (gene) Snake gourd v1

Overview


Name	Tan0018993
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Biogenesis of lysosome-related organelles complex 1 subunit 7
Location	LG10: 63462275 .. 63468248 (+)
RNA-Seq Expression	Tan0018993
Synteny	Tan0018993

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGATGGAGAAAACTTTCATTTTCTCTCGTCTCTCCCACAACTTCTTCTTCTTCCTTTTCCCTATCGATTGAACCCTCGTTGCGTAGCCCTTGTCATTGACCCATCACCACGTTGTTGCACTCCATGTTGAATCTCATCGTGCAACAATCTGATTCGCCAGCCTCGTTGCCAAACGTCATGTCCAGGTCGTGTTGCCGCTTCGCTTGCTGCACGCCCACGTCGTTGGTCGTGTGCCGCCACAGCTACGCGTGAACATCGATTGCCAGCCTCATGCAACATCGACTTGTTGTTATTTTTGTTGAAAAATCCAATCGAATATATCCCGAACACTTATACTGCATGTTGAATCGATGAGTAAGTTTTCATGAGTCCTGGCCCGCATTATATTTTTGTTCTTTGGTGTTTTCGGCACAGTTTTAGGATATTAAGGCTAACCCACAATAAATTGGATTGAATTTTAGACCACCCATGACCATTGGGTTTTGGATTCACGAAATCAAACAATTTAGAGTTAAGTTTGGTGGCATGTCGAGTTCGATCAAGGTTGGAGGTGTTTATAATGGAGAGATTTAATTGGGTTGGTCCTTGCCATTATTTGAAGGCTTTGATTGAGTTTTAAGGGATGATTTACTTAGTCAATGGTCATTTAAAGTGGCCCATTGATTATAGGATTCAATTGAGGACACCCATCATATTTAAAGGTCATTTTGGGCAAGTTTGAGTTGATTCGAGTTGTTATCCAACAACTTCTTGCATTATTTGAGTGTAATTTAACTCATGAAACTAAAGTTCCAAGTTGATCTTTGAACTTTAAAGTTCAATGTTGTGAATTTCAAGTGATGGTCTCTTTAAAATTATTATAGGTAGCACTTGATCTCTTTAGTAGGAGTTGGAGGCTCCTTGTTCTTGGACTCATAACATTGTAAGTAGTCATTTGGATTTAAGCACTTAAGTTATTACTTGATTTGGTTTAAGTGTGAACATATGTGATTTGTGAAGGGATGCCTAAAATTGTGCTTTGTGATGCATGTAATGGTTAATTAGGGGATTTGTATGGAAGTTGTGTTTGAGTTAAAAGTGGCCTAACATGTGCTTCTTTCTAATATGTGCTTGAGCATGACTAGCGTTGGATGTTAGACTTAGTAAAGAGCTTAGATAAATGCTCACCTTAACATATTTTGACATGGTGTCTCAAGAAATTCGACAATTGAATTAAGGAGATTGATAATATAGTCTTCAAGGGGACTCAGTCGAATGTATGTGTTCCGAATTTAACTTGTTAGAGCTTTGTTATGGAGATGACCCTTGGAATTGCATGTAAATAGTCGGTAGGATTTTCAAACAAGTTCATAAGTGAAAAGACTTGTTGTGCAAGGTTGCCCGAATGATACATTTTGCTTCGATGTGGTTGGTTGTATTGTTATCTAGATATGTGATTATCTCATTGTATGGTGTTGTTATGTGAAGTATATGTATGGTACAAACTGTTACAATGTTGACTGGGTGCATAGTTTGTTGATTTATAGTGTTTAGCCTATTATGGAAAACGTTTGGCAAAGTTTAGTTTGTCATAGAGTTGGTCGTTGTGAGTTGTATGTTTGGTTGTGGTTAGACTAGAGACCTGATCGTGATTAAGACTCTATTAGGATAGGCACAAGGGTTGAATGAGTTACTTAGGAAACCCATTCAACATTGCACAAACGAAGCTTGTTAAACTAGCACTAACGATCTCCGTGTCACCTATGGGTTGACGAAACTAAGTGTCGGCATTAGGGTTGGAGCTAGTTCATGGGCGATTCCCCCACCGGGTCTGGTTGAGGGATGTCGGTTCCTTTTTCGATGCACATGCTTAGGGGGTGATTCTTCCAACAAGTGTAGGATGTTGGTTACTTTCCTTCATCCTGTGTGCTAGCCTAGAGGCGATTCTCCTTCATTTAGAGTGTGAGGGTTGCTTTCTTTCATGGCTTCGTGGTAGTGAGGTGAGCAGGAGTGAGAGTTGTTTTCTTTCACTGTCATTCGTCAACCTACATTATGGGACCGAGGGTACAACTCGAGACATTACCATCGAGACAGACCTAGAGTGAGTGAAAATTGTAGATGCCTGAATAGGGGTTGGATTGTTCAGGAGTATGTGCAAAGCTGGAGTAATGTTACTTTCTGTTTGTGTTGTTGTAGTTTTGACCTTAAGTGGGATACCTATTGAGTATTTTTAATACTTACCTTCTACTTTGATATTTTTGTTTGCAAATTAGGCTAAACCATGAGGTGTTAGAAACCATGAGGTGGAAGAAAAAACGACTAACTTCCAAATTGGGCCGGGCCCATGTGTCCGTGGACACTGTCCGGCCCAGCTACCTCGAAATCATGCATAAATTGAAATAAAAATCAAATAAAATATATATTTTTTGTTTGAAAAAAAAATCAAATAAAATATTAACATTTGGCTGATTGTTTTATGAATATTATACATTGGAATATTTTAACATTTAATTTCGTCGGTGTAGTTTTCGAGCGAAATAACCTTTCCGGCTACGGTTGGGCCAGAAGCTCTTCTCTCTGATCTCCATCTCCGAGGATTCCGCCGGCGACGACGAACCAGTTCGCGAATTCTTCTGGATTCGTAGCACGAAGTTTGGTGACACCGTGAACTACGTTAAGTGGCAATTTCCCCTTTCTTACTTTCGATGTGATCTCTCTGGAATTCGATTCTAAATACATGCTCGTATTACTCCATTTCTGTTTTGTTTGAGCATTAATGGAGGTTAATCTCGGGGAAACTTTTGCATATTACGGGGTTCCAGCCCCAATTTTGGTTTTTTATTACCCAGTGATCTTGGTTCAAGAATTCCAGAAAACGAATATTCCGTTAGTTATGCATTGTGCATCTCGTTGCAATCGTCTAGTCGCATTCGGCGTTGACATAGGATAATCCCATTTCGTTGGTTCGTAGATCACTTTTTTCAAAATTACAGCAGATATAATTGTTAGTTTCTGGCCACTGACTATATTCTGTTCTGGTCTTCAAGATTTCGTGATTGAATCTGCATGTTAGTTTCATTACAATTGTGGTAGCTGCGATCTTGACTCCATGGATTTTTTCTCGAACAGCTGAGCAGTGAGGTTTATTCTCAGTTATTTTTTGTTTTGATTTCTCTCTTGTAGATGGCAGACTCATAAGATGCTCGAATTGTGGAAACTATTTTCATTTTTAGACTTTTTTGCCTCACATTATGAATATTGTAATTGTTTCTACATTATGCTGGTAGCTAACGAACTAATACGAGTCCGGAGAAAGATGGGCGATTATCATTGTGAATGATGAACTTTGTGATCTCTTTCAGAAATTGCAAGAGATGTATAGTCCGGACGAGGACAGCAATGTCTCTGTTGAATTGGAGACTTCTATTAATCCAAATGGTGATCTTCAGGAAGGAAATAATATTGCAGATGTGAATTTGGGAAACTCTAATGCTATAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTTGACCGACTTACTTCAGGTAGGATTATATTTACTTTGTTTTATTAGGTTTATCACAGAAAATAGAATTGCTTCCTTGTACTTTGACTAATTATTATATAGCTTTTAAGATTCTGTCATTTACTAGGTTTAAGGGAAGTTTATACATCGTAAATGAATATTCTCTCATAATTTACATTTTTCTTGTCTTGGATGCAAAAATGCAGCTTCTGAATTTCATGGATTTTTCAATGGTGTGAATAGTTATTATTTTAACTTTTAACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCGAGGATTTCTAGTGTAAGAAAGAGAGTTTTGTCTCTAAATTCCATCTTAAGGTCCATACAACGAAGAGTGGATAATATAGATCGGGCAATCTCAATGGGTAATCTACCAGGTGATTGACTTCTTTCTTCGAGGGCCTCAATTTTATTATCTTTTATGACTTTTAATTTAATGGAAAATATTGGATAATATCATTGGCTGTCAAGGCTTGTTTAATAATGTTCCTTATTCTCTCTGTCATTTTATTGGAAAAAAAAGGTGTTATCACAATTGTTTTATTCTTTATTGATTCAACGTATAAATGATAAGGAGTGAGAGATGATGAAGTTTCTGAGTTGCCCTTTGTTCTTCCTCACGTTCCCTATATAATTCTTTTTGTAGTTATACATTTTATAATTAACTTTGATTGGGCTATTTTTGTAAGCTCGTTATTGTCAGATTTTATATGTAACTTTTCACTACATTAATGAGTTTGCGTGGAATATATTACTCTTTAGATAACGAGATAGAATCAAGATAGATATTCATTGGAAAACTTCGGTTTGTTACTTCTTATGGAAGATTTTAAACTTTCCTTTCACATGTTGAACAAGGAGAATTTTAATGATGATTTTAAACCTACCAGCAAGGATCTTTTACTTTTGAGTGAAGAGATGGAATTGAAGTATTAAATGCAAAACCTCAGCTGTTCTTTCTCAGGGTTTCTCATTCAAATATCATATGAATTTTTTTTATACATATGCATTTGGATGTGTACCTAATGTGACTCTGTCCAACAATTTTGGCATGTTTCTCCGGTGCATGAGACCAATGTGTTAGTTTTTGGAAAGTTTAGGCTAAGAATCTATTCTCCTCTTGTTCAAATAATCGTTCCATGATTTTTTTATAGCCATGCTTCTTAGGTCATAAATCATGATTTTGTTTTGCTTTCTGAATTACATTGGGTGATGCTTCCATGGGACAAATCATTTTGCTTCTTTGTCGGGTAGTCTCGATCTTGACAACTTGATTTCTTTCTTCTTTGTACCTTTTTTTTTTTAAATTATGTTAATGACATATACTGAACTGAATTTCCTATAGTTTCCAGGCATTTAAATATCTATGTAGGTTCTTCTTTTTTAAGATCTAAAGACGGGAGAATGAAAGAAGAAAAGGGAGTAGCACCATAACAGATGGAAGTTGACTGGTGGTGGTAGGGTTTGGAAATGAGGGGAAAAGGTTGATTTTGGCATTAAGAAGTCGAGGAAAGTCCGAATTTTCATTTTAAAACGCAATGCATGAAGAATTAAGTAAACTTTTGGAGTGGCTCCAAATAGAAGCATATGTATACTCTTATATTGTCACTAGGTACTAAGATCCAAGTGGACTATTTAAGAAATAGACTCTACTAGAATCAACTTGTGTGCCCTTCGAACTAATCTCACATTTCTACATTTGGTTGCCAAAAAAAGTCGTAGGATGTTAAATCCTAGCTTACCGGTGACCGCCGTGATTTGAACTCAAAGATGTTTATTCTCTTTTCCTTTCCTTTACCCCTTCCCTTCCCTTCTCATTATGTAGCCTGCATCAATTAGTGATATGAATTATGGTCTTCATAGACAAAGAAAATACATGCTCAGTTTTCAATCACACTGATTACCATCAGATTGCTGTCTTATAGATTAATTGCTTATTTCTGATTAACAGTCTACAACCAGGGGGGGCAGGCATTCATTTTGTGGTTCATTTGGCTGATTGTATATGCATATTTATTATACATTGGAATAAAAATTAAGTAGCGTGAGTATAAGATAACCCCATGCTATTTATTTCATTGTCTCTTTGACACTAAAATGTACCAGTTATCTACAGATACTCGTTCCTCTCAAAGTTCCTCACAACCTCAGAATGGATGAAGATTGTACGTATCTGCAGTTCCTTTTCATTCTTCATTTTATGTATCCGAAGTTTTGGCAATTGTGTGTATCCTTTTACTGCCCCCTCCATTTTTACTACTAGGCTTGAAAATACTGGAATAGAAAGACTGTTTCTGAATCAACAATTTTGAATCTTACAATACAACCTGCATAATTTATCGATC

mRNA sequence

CAAAAGATGGAGAAAACTTTCATTTTCTCTCGTCTCTCCCACAACTTCTTCTTCTTCCTTTTCCCTATCGATTGAACCCTCGTTGCGTAGCCCTTGTCATTGACCCATCACCACGTTGTTGCACTCCATGTTGAATCTCATCGTGCAACAATCTGATTCGCCAGCCTCGTTGCCAAACGTCATGTCCAGGTCGTGTTGCCGCTTCGCTTGCTGCACGCCCACGTCGTTGGTCGTGTGCCGCCACAGCTACGCGTGAACATCGATTGCCAGCCTCATGCAACATCGACTTGTTGTTATTTTTGTTGAAAAATCCAATCGAATATATCCCGAACACTTATACTGCATGTTGAATCGATGAGTAGCACTTGATCTCTTTAGTAGGAGTTGGAGGCTCCTTGTTCTTGGACTCATAACATTTTTTCGAGCGAAATAACCTTTCCGGCTACGGTTGGGCCAGAAGCTCTTCTCTCTGATCTCCATCTCCGAGGATTCCGCCGGCGACGACGAACCAGTTCGCGAATTCTTCTGGATTCGTAGCACGAAGTTTGGTGACACCGTGAACTACGTTAAGTGGCAATTTCCCCTTTCTTACTTTCGATGTGATCTCTCTGGAATTCGATTCTAAATACATGCTCGTATTACTCCATTTCTGTTTTGTTTGAGCATTAATGGAGGTTAATCTCGGGGAAACTTTTGCATATTACGGGGTTCCAGCCCCAATTTTGGTTTTTTATTACCCAGTGATCTTGGTTCAAGAATTCCAGAAAACGAATATTCCGTTAGTTATGCATTGTGCATCTCGTTGCAATCGTCTAGTCGCATTCGGCGTTGACATAGGATAATCCCATTTCGTTGGTTCGTAGATCACTTTTTTCAAAATTACAGCAGATATAATTGTTAGTTTCTGGCCACTGACTATATTCTGTTCTGGTCTTCAAGATTTCGTGATTGAATCTGCATGTTAGTTTCATTACAATTGTGGTAGCTGCGATCTTGACTCCATGGATTTTTTCTCGAACAGCTGAGCAGTGAGGTTTATTCTCAGTTATTTTTTGTTTTGATTTCTCTCTTGTAGATGGCAGACTCATAAGATGCTCGAATTGTGGAAACTATTTTCATTTTTAGACTTTTTTGCCTCACATTATGAATATTGTAATTGTTTCTACATTATGCTGGTAGCTAACGAACTAATACGAGTCCGGAGAAAGATGGGCGATTATCATTGTGAATGATGAACTTTGTGATCTCTTTCAGAAATTGCAAGAGATGTATAGTCCGGACGAGGACAGCAATGTCTCTGTTGAATTGGAGACTTCTATTAATCCAAATGGTGATCTTCAGGAAGGAAATAATATTGCAGATGTGAATTTGGGAAACTCTAATGCTATAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTTGACCGACTTACTTCAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCGAGGATTTCTAGTGTAAGAAAGAGAGTTTTGTCTCTAAATTCCATCTTAAGGTCCATACAACGAAGAGTGGATAATATAGATCGGGCAATCTCAATGGGTAATCTACCAGATACTCGTTCCTCTCAAAGTTCCTCACAACCTCAGAATGGATGAAGATTGTACGTATCTGCAGTTCCTTTTCATTCTTCATTTTATGTATCCGAAGTTTTGGCAATTGTGTGTATCCTTTTACTGCCCCCTCCATTTTTACTACTAGGCTTGAAAATACTGGAATAGAAAGACTGTTTCTGAATCAACAATTTTGAATCTTACAATACAACCTGCATAATTTATCGATC

Coding sequence (CDS)

ATGTATAGTCCGGACGAGGACAGCAATGTCTCTGTTGAATTGGAGACTTCTATTAATCCAAATGGTGATCTTCAGGAAGGAAATAATATTGCAGATGTGAATTTGGGAAACTCTAATGCTATAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCCAAAGCTGACGATACTCTTAAAAGCCAGAGCCAGCTTTCATCTTCCCTTGACCGACTTACTTCAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCGAGGATTTCTAGTGTAAGAAAGAGAGTTTTGTCTCTAAATTCCATCTTAAGGTCCATACAACGAAGAGTGGATAATATAGATCGGGCAATCTCAATGGGTAATCTACCAGATACTCGTTCCTCTCAAAGTTCCTCACAACCTCAGAATGGATGA

Protein sequence

MYSPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVDNIDRAISMGNLPDTRSSQSSSQPQNG

Homology

[Close]

BLAST of Tan0018993 vs. NCBI nr
Match: XP_004144641.1 (uncharacterized protein LOC101218072 [Cucumis sativus] >XP_031740504.1 uncharacterized protein LOC101218072 [Cucumis sativus] >KAE8649780.1 hypothetical protein Csa_012268 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56
Identity = 125/144 (86.81%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 2   YSPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKAD 61
           YS +EDSNVS ELETSI  NGDLQEGN+  + NLGNSNA+ANGLSSMLINIIRDFDSKAD
Sbjct: 11  YSANEDSNVSAELETSITLNGDLQEGNDSENKNLGNSNALANGLSSMLINIIRDFDSKAD 70

Query: 62  DTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRV 121
           DTLKSQ+ LSSSLDRLT+ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNSILR+IQRR+
Sbjct: 71  DTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRM 130

Query: 122 DNIDRAISMGNLPDTRSSQSSSQP 146
           DNIDRAI+MGNLPDTRSS SSSQP
Sbjct: 131 DNIDRAITMGNLPDTRSSHSSSQP 154

[Close]

BLAST of Tan0018993 vs. NCBI nr
Match: XP_008444284.1 (PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444285.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444286.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 2.4e-56
Identity = 125/144 (86.81%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 2   YSPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKAD 61
           YS +EDSNVS ELETSI+P GDLQEGN+  + NLGNSNA+ANGLSSMLINIIRDFDSKAD
Sbjct: 11  YSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKAD 70

Query: 62  DTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRV 121
           DTLKSQ+ LSSSLDRLT+ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNSILR+IQRRV
Sbjct: 71  DTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRV 130

Query: 122 DNIDRAISMGNLPDTRSSQSSSQP 146
           DNIDRAI+MGNLPDTRSS +SSQP
Sbjct: 131 DNIDRAITMGNLPDTRSSPNSSQP 154

[Close]

BLAST of Tan0018993 vs. NCBI nr
Match: XP_023535159.1 (uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535161.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535162.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.7 bits (574), Expect = 2.6e-55
Identity = 126/144 (87.50%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 5   DEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADDTL 64
           +EDSNVSVELETSI+ NG LQE N++A+ NL NSNA+ANGLSSMLINIIRDFDSKADDTL
Sbjct: 13  NEDSNVSVELETSISRNGGLQEENDLANTNLENSNALANGLSSMLINIIRDFDSKADDTL 72

Query: 65  KSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVDNI 124
           KSQSQLSSSLDR+T ELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRR+DNI
Sbjct: 73  KSQSQLSSSLDRITIELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRLDNI 132

Query: 125 DRAISMGNLPDTRSSQSSSQPQNG 149
           DRAISMGN PDT SSQSSSQ Q+G
Sbjct: 133 DRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of Tan0018993 vs. NCBI nr
Match: XP_023523877.1 (uncharacterized protein LOC111787988 [Cucurbita pepo subsp. pepo] >XP_023523879.1 uncharacterized protein LOC111787988 [Cucurbita pepo subsp. pepo] >XP_023523880.1 uncharacterized protein LOC111787988 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 3.4e-55
Identity = 123/146 (84.25%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 3   SPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADD 62
           S ++DS VS ELE SI+PNGD++E N IA++NLG+SNA+ANGLSSML+NI+RDFDSKADD
Sbjct: 11  SANKDSKVSAELEPSISPNGDIEEENEIANMNLGDSNALANGLSSMLMNIMRDFDSKADD 70

Query: 63  TLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVD 122
           TLKSQSQLS SLDRLTSELDQLLEDAPFPFIMQHA RISSVRKRVLSLNSILRS+QRRVD
Sbjct: 71  TLKSQSQLSFSLDRLTSELDQLLEDAPFPFIMQHALRISSVRKRVLSLNSILRSVQRRVD 130

Query: 123 NIDRAISMGNLPDTRSSQSSSQPQNG 149
           NIDRAISM NLPD RSSQSSSQP NG
Sbjct: 131 NIDRAISMSNLPDIRSSQSSSQPHNG 156

[Close]

BLAST of Tan0018993 vs. NCBI nr
Match: XP_022940122.1 (uncharacterized protein LOC111445840 isoform X2 [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 7.6e-55
Identity = 122/146 (83.56%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 3   SPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADD 62
           S ++DS VS ELE SI+PNGD++E N+IA++NLG+SNA+ANGLSSML+NI+RDFDSKADD
Sbjct: 11  SANKDSKVSAELEPSISPNGDIEEENDIANMNLGDSNALANGLSSMLMNIMRDFDSKADD 70

Query: 63  TLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVD 122
           TLKSQSQLS SLDRLTSELDQLLEDAPFPFIMQHA RISSVRKRVLSLNSILRS+QRRVD
Sbjct: 71  TLKSQSQLSFSLDRLTSELDQLLEDAPFPFIMQHALRISSVRKRVLSLNSILRSVQRRVD 130

Query: 123 NIDRAISMGNLPDTRSSQSSSQPQNG 149
           NIDR ISM NLPD RSSQSSSQP NG
Sbjct: 131 NIDRVISMSNLPDIRSSQSSSQPHNG 156

[Close]

BLAST of Tan0018993 vs. ExPASy TrEMBL
Match: A0A1S3BAU4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucumis melo OX=3656 GN=LOC103487651 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 125/144 (86.81%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 2   YSPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKAD 61
           YS +EDSNVS ELETSI+P GDLQEGN+  + NLGNSNA+ANGLSSMLINIIRDFDSKAD
Sbjct: 11  YSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKAD 70

Query: 62  DTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRV 121
           DTLKSQ+ LSSSLDRLT+ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNSILR+IQRRV
Sbjct: 71  DTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRTIQRRV 130

Query: 122 DNIDRAISMGNLPDTRSSQSSSQP 146
           DNIDRAI+MGNLPDTRSS +SSQP
Sbjct: 131 DNIDRAITMGNLPDTRSSPNSSQP 154

[Close]

BLAST of Tan0018993 vs. ExPASy TrEMBL
Match: A0A6J1FIR1 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111445840 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 122/146 (83.56%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 3   SPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADD 62
           S ++DS VS ELE SI+PNGD++E N+IA++NLG+SNA+ANGLSSML+NI+RDFDSKADD
Sbjct: 11  SANKDSKVSAELEPSISPNGDIEEENDIANMNLGDSNALANGLSSMLMNIMRDFDSKADD 70

Query: 63  TLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVD 122
           TLKSQSQLS SLDRLTSELDQLLEDAPFPFIMQHA RISSVRKRVLSLNSILRS+QRRVD
Sbjct: 71  TLKSQSQLSFSLDRLTSELDQLLEDAPFPFIMQHALRISSVRKRVLSLNSILRSVQRRVD 130

Query: 123 NIDRAISMGNLPDTRSSQSSSQPQNG 149
           NIDR ISM NLPD RSSQSSSQP NG
Sbjct: 131 NIDRVISMSNLPDIRSSQSSSQPHNG 156

[Close]

BLAST of Tan0018993 vs. ExPASy TrEMBL
Match: A0A6J1IKP2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111477110 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.3e-54
Identity = 122/144 (84.72%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 5   DEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADDTL 64
           +EDS+ SVELETSI+ NG+L+E N++A+ NL NSNA+ANGLSSMLINIIRDFDSKADDTL
Sbjct: 13  NEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINIIRDFDSKADDTL 72

Query: 65  KSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVDNI 124
           KSQSQLSSSLDR+T+ELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRR+DNI
Sbjct: 73  KSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRLDNI 132

Query: 125 DRAISMGNLPDTRSSQSSSQPQNG 149
           DRAISMGN PDT SSQS SQ Q+G
Sbjct: 133 DRAISMGNRPDTLSSQSCSQTQHG 156

[Close]

BLAST of Tan0018993 vs. ExPASy TrEMBL
Match: A0A6J1FEP4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.3e-54
Identity = 123/144 (85.42%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 5   DEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADDTL 64
           +EDS+VSVELETSI+ NGDL+E N++A+ NL NSNA+ANGLSSMLINIIRDFDSKADDTL
Sbjct: 13  NEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINIIRDFDSKADDTL 72

Query: 65  KSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVDNI 124
           KSQSQLSSSLDR+T+ELDQLLE APFPFIMQHASRISSVRKRVLSLNSIL SIQRR+DNI
Sbjct: 73  KSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLNSILGSIQRRLDNI 132

Query: 125 DRAISMGNLPDTRSSQSSSQPQNG 149
           DRAISMGN PDT SSQSSSQ Q+G
Sbjct: 133 DRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of Tan0018993 vs. ExPASy TrEMBL
Match: A0A6J1CN29 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica charantia OX=3673 GN=LOC111013092 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.0e-54
Identity = 122/146 (83.56%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 3   SPDEDSNVSVELETSINPNGDLQEGNNIADVNLGNSNAIANGLSSMLINIIRDFDSKADD 62
           S ++DSNVSVELE S++ NG L+EGN IA++NLGN++ +A GLSSML NIIRDFDSKADD
Sbjct: 11  SANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNIIRDFDSKADD 70

Query: 63  TLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRVD 122
           TLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNSILRSIQRRVD
Sbjct: 71  TLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNSILRSIQRRVD 130

Query: 123 NIDRAISMGNLPDTRSSQSSSQPQNG 149
           NIDRAI+MGNL DT SSQSS QPQ+G
Sbjct: 131 NIDRAIAMGNLQDTCSSQSSLQPQHG 156

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BLAST of Tan0018993 vs. TAIR 10
Match: AT1G79070.1 (SNARE-associated protein-related )

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-28
Identity = 65/107 (60.75%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 36  GNSNAIANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQ 95
           G   A+A GLS+ML ++I+DFDSKA DTL SQ +LS SLDRL  ELDQLLE+AP PFI+Q
Sbjct: 32  GGGEAMARGLSAMLESVIKDFDSKALDTLNSQDELSGSLDRLVQELDQLLENAPLPFIVQ 91

Query: 96  HASRISSVRKRVLSLNSILRSIQRRVDNIDRAISMGNLPDTRSSQSS 143
           HASRISSV++RV SLN +L+S+QRR+DNID  +S     +  SS+++
Sbjct: 92  HASRISSVKQRVSSLNLVLKSVQRRIDNIDHMLSANTTQEKASSETT 138

The following BLAST results are available for this feature:

BLAST of Tan0018993 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0018993 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144641.1	1.8e-56	86.81	uncharacterized protein LOC101218072 [Cucumis sativus] >XP_031740504.1 uncharact...	[more]
XP_008444284.1	2.4e-56	86.81	PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo] >XP_008444285.1 P...	[more]
XP_023535159.1	2.6e-55	87.50	uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160....	[more]
XP_023523877.1	3.4e-55	84.25	uncharacterized protein LOC111787988 [Cucurbita pepo subsp. pepo] >XP_023523879....	[more]
XP_022940122.1	7.6e-55	83.56	uncharacterized protein LOC111445840 isoform X2 [Cucurbita moschata]	[more]

BLAST of Tan0018993 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAU4	1.1e-56	86.81	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucumis melo OX...	[more]
A0A6J1FIR1	3.7e-55	83.56	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1IKP2	5.3e-54	84.72	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxim...	[more]
A0A6J1FEP4	5.3e-54	85.42	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1CN29	9.0e-54	83.56	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica chara...	[more]

BLAST of Tan0018993 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79070.1	2.2e-28	60.75	SNARE-associated protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
IPR028119	Snapin/Pallidin/Snn1	PFAM	PF14712	Snapin_Pallidin	coord: 40..124 e-value: 6.3E-21 score: 74.6
IPR017246	Snapin	PANTHER	PTHR31305	SNARE-ASSOCIATED PROTEIN SNAPIN	coord: 28..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018993.1	Tan0018993.1	mRNA
Tan0018993.2	Tan0018993.2	mRNA
Tan0018993.3	Tan0018993.3	mRNA
Tan0018993.4	Tan0018993.4	mRNA
Tan0018993.5	Tan0018993.5	mRNA
Tan0018993.6	Tan0018993.6	mRNA
Tan0018993.7	Tan0018993.7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0031083	BLOC-1 complex