Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGACCCATCTTCCCAAAGCTCCTTTTCCTCAAGAAATCGTCGAGGACCAAAAATTTTGAGCTTCTCCAGTACTATAATTATGGGTTTGTTCGAGAATTCCAATTCTCGCCTTCCACCACTCCTCTGTTTCGTTTTTACAGAGGCCGCCACCGCCGTCTCCGCTGCCGTGATGTCTATTCGGTGTTGTTTCCCTGCAGATGCTTCGGCAGTTTTGGAGTTCAAAGTGAAGGAGATGGCGATTACAGAGTGGAGGAGGAAGCTCTGCCCGCCATTGAAGGGCGGTTTTCGGAGGCGTTGGATTGGAGTGAATCGAGTGATGAAGATAATTCCATTGATCGGAGGGCTGAATTGTTCATTGAGAAATTCTATGCGGATATGAAAATGGAGAGGCTGGCATCGGTTTGA
mRNA sequence
ATGAGAAGACCCATCTTCCCAAAGCTCCTTTTCCTCAAGAAATCGTCGAGGACCAAAAATTTTGAGCTTCTCCAGTACTATAATTATGGGTTTGTTCGAGAATTCCAATTCTCGCCTTCCACCACTCCTCTGTTTCGTTTTTACAGAGGCCGCCACCGCCGTCTCCGCTGCCGTGATGTCTATTCGGTGTTGTTTCCCTGCAGATGCTTCGGCAGTTTTGGAGTTCAAAGTGAAGGAGATGGCGATTACAGAGTGGAGGAGGAAGCTCTGCCCGCCATTGAAGGGCGGTTTTCGGAGGCGTTGGATTGGAGTGAATCGAGTGATGAAGATAATTCCATTGATCGGAGGGCTGAATTGTTCATTGAGAAATTCTATGCGGATATGAAAATGGAGAGGCTGGCATCGGTTTGA
Coding sequence (CDS)
ATGAGAAGACCCATCTTCCCAAAGCTCCTTTTCCTCAAGAAATCGTCGAGGACCAAAAATTTTGAGCTTCTCCAGTACTATAATTATGGGTTTGTTCGAGAATTCCAATTCTCGCCTTCCACCACTCCTCTGTTTCGTTTTTACAGAGGCCGCCACCGCCGTCTCCGCTGCCGTGATGTCTATTCGGTGTTGTTTCCCTGCAGATGCTTCGGCAGTTTTGGAGTTCAAAGTGAAGGAGATGGCGATTACAGAGTGGAGGAGGAAGCTCTGCCCGCCATTGAAGGGCGGTTTTCGGAGGCGTTGGATTGGAGTGAATCGAGTGATGAAGATAATTCCATTGATCGGAGGGCTGAATTGTTCATTGAGAAATTCTATGCGGATATGAAAATGGAGAGGCTGGCATCGGTTTGA
Protein sequence
MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDVYSVLFPCRCFGSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRAELFIEKFYADMKMERLASV
Homology
BLAST of Tan0016728 vs. NCBI nr
Match:
XP_038893176.1 (uncharacterized protein LOC120082033 [Benincasa hispida])
HSP 1 Score: 177.9 bits (450), Expect = 5.7e-41
Identity = 98/135 (72.59%), Postives = 108/135 (80.00%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
M+RPI PKLLFLKKSSR +FEL +YNYGFVR+FQFSPSTTPLFRFYRGR R L RDV
Sbjct: 25 MKRPIIPKLLFLKKSSRRNSFELHHHYNYGFVRDFQFSPSTTPLFRFYRGR-RGLCRRDV 84
Query: 61 YSVLFPCRCFG-SFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRAEL 120
YSVLFPCRC G S G + E DGDY V EEALP E+LDW SD+D+SIDRRAE+
Sbjct: 85 YSVLFPCRCIGSSSGAEKEEDGDYSV-EEALP-------ESLDW---SDDDDSIDRRAEI 144
Query: 121 FIEKFYADMKMERLA 135
FI+KFYADMKMERLA
Sbjct: 145 FIQKFYADMKMERLA 147
BLAST of Tan0016728 vs. NCBI nr
Match:
XP_022968138.1 (uncharacterized protein LOC111467464 [Cucurbita maxima])
HSP 1 Score: 174.5 bits (441), Expect = 6.3e-40
Identity = 95/136 (69.85%), Postives = 104/136 (76.47%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
M++PIFPKLLFLKKSS K FELLQ FQFSPSTTPLFR YRGR RRLR V
Sbjct: 25 MKKPIFPKLLFLKKSSPAKKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 84
Query: 61 YSVLFPCRCFGSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRAELF 120
YSVLFPCRC G+FG + EG EE PAIEGR SEALD SE SDE++SIDRRAELF
Sbjct: 85 YSVLFPCRCIGNFGGEIEG-------EEGFPAIEGRVSEALDCSELSDEEDSIDRRAELF 144
Query: 121 IEKFYADMKMERLASV 137
IEKFYADM+MERLA++
Sbjct: 145 IEKFYADMEMERLAAI 144
BLAST of Tan0016728 vs. NCBI nr
Match:
XP_004135396.1 (uncharacterized protein LOC101211232 [Cucumis sativus])
HSP 1 Score: 171.8 bits (434), Expect = 4.1e-39
Identity = 94/139 (67.63%), Postives = 106/139 (76.26%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRF-YRGRHRRLRCRD 60
M+RPI PKLLFLKKSSR K+FELL +YNYGFVR+F+FSPSTTPLFRF RG R LR D
Sbjct: 25 MKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRFNNRGGRRGLRRYD 84
Query: 61 VYSVLFPCRCF--GSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRA 120
V SVLFPCRC GS G + EGDGDY VEE F E+LDW SD+D+SIDRRA
Sbjct: 85 VCSVLFPCRCIVGGSGGEKKEGDGDYGVEE--------AFPESLDW---SDDDDSIDRRA 144
Query: 121 ELFIEKFYADMKMERLASV 137
E+FI+KFY DMKMERL S+
Sbjct: 145 EIFIQKFYEDMKMERLTSI 152
BLAST of Tan0016728 vs. NCBI nr
Match:
KAE8648793.1 (hypothetical protein Csa_009258 [Cucumis sativus])
HSP 1 Score: 171.8 bits (434), Expect = 4.1e-39
Identity = 94/139 (67.63%), Postives = 106/139 (76.26%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRF-YRGRHRRLRCRD 60
M+RPI PKLLFLKKSSR K+FELL +YNYGFVR+F+FSPSTTPLFRF RG R LR D
Sbjct: 23 MKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRFNNRGGRRGLRRYD 82
Query: 61 VYSVLFPCRCF--GSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRA 120
V SVLFPCRC GS G + EGDGDY VEE F E+LDW SD+D+SIDRRA
Sbjct: 83 VCSVLFPCRCIVGGSGGEKKEGDGDYGVEE--------AFPESLDW---SDDDDSIDRRA 142
Query: 121 ELFIEKFYADMKMERLASV 137
E+FI+KFY DMKMERL S+
Sbjct: 143 EIFIQKFYEDMKMERLTSI 150
BLAST of Tan0016728 vs. NCBI nr
Match:
KAG7013012.1 (hypothetical protein SDJN02_25767, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 171.4 bits (433), Expect = 5.4e-39
Identity = 92/136 (67.65%), Postives = 104/136 (76.47%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
M++PIFPKLLFLKKSS + FELLQ FQFSPSTTPLFR YRGR RRLR V
Sbjct: 1 MKKPIFPKLLFLKKSSPAEKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 60
Query: 61 YSVLFPCRCFGSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRAELF 120
YSVLF CRC GSFG +++G E PAIEGR SEALDWSE SDE++SIDRRAELF
Sbjct: 61 YSVLFSCRCIGSFGGENDG-------EVGFPAIEGRGSEALDWSELSDEEDSIDRRAELF 120
Query: 121 IEKFYADMKMERLASV 137
I+KFYADM+MERLA++
Sbjct: 121 IQKFYADMEMERLAAI 120
BLAST of Tan0016728 vs. ExPASy TrEMBL
Match:
A0A6J1HX57 (uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464 PE=4 SV=1)
HSP 1 Score: 174.5 bits (441), Expect = 3.1e-40
Identity = 95/136 (69.85%), Postives = 104/136 (76.47%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
M++PIFPKLLFLKKSS K FELLQ FQFSPSTTPLFR YRGR RRLR V
Sbjct: 25 MKKPIFPKLLFLKKSSPAKKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 84
Query: 61 YSVLFPCRCFGSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRAELF 120
YSVLFPCRC G+FG + EG EE PAIEGR SEALD SE SDE++SIDRRAELF
Sbjct: 85 YSVLFPCRCIGNFGGEIEG-------EEGFPAIEGRVSEALDCSELSDEEDSIDRRAELF 144
Query: 121 IEKFYADMKMERLASV 137
IEKFYADM+MERLA++
Sbjct: 145 IEKFYADMEMERLAAI 144
BLAST of Tan0016728 vs. ExPASy TrEMBL
Match:
A0A5A7SZQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001120 PE=4 SV=1)
HSP 1 Score: 168.7 bits (426), Expect = 1.7e-38
Identity = 95/140 (67.86%), Postives = 108/140 (77.14%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYG-FVREFQFSPSTTPLFRF-YRGRHRRLRCR 60
M+RP+ PKLLFLKKSS TKNFELLQ+YNYG FVR+FQFSPSTTPLFRF RG R LR
Sbjct: 25 MKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDFQFSPSTTPLFRFNNRGSRRGLRRY 84
Query: 61 DVYSVLFPCRCF--GSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRR 120
DV SVLFPCRC S G + E DGDY VEE F E+LDWS+ ++D+SIDRR
Sbjct: 85 DVCSVLFPCRCIIGASGGEKKEKDGDYDVEE--------AFPESLDWSD--NDDDSIDRR 144
Query: 121 AELFIEKFYADMKMERLASV 137
AE+FI+KFYADMKMERLAS+
Sbjct: 145 AEIFIQKFYADMKMERLASI 154
BLAST of Tan0016728 vs. ExPASy TrEMBL
Match:
A0A6J1G0E9 (uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC111449533 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 4.1e-37
Identity = 91/136 (66.91%), Postives = 103/136 (75.74%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
M++PIFPKLLFLKKSS + FELLQ FQFSPSTTPLFR YRGR RRLR V
Sbjct: 25 MKKPIFPKLLFLKKSSPAEKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 84
Query: 61 YSVLFPCRCFGSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSDEDNSIDRRAELF 120
YSVLFP RC GSFG +++G E PAIEGR SEA DWSE SDE++SIDRRAELF
Sbjct: 85 YSVLFP-RCIGSFGGENDG-------EVGFPAIEGRGSEAWDWSELSDEEDSIDRRAELF 143
Query: 121 IEKFYADMKMERLASV 137
I+KFYADM+MERLA++
Sbjct: 145 IQKFYADMEMERLAAI 143
BLAST of Tan0016728 vs. ExPASy TrEMBL
Match:
A0A5N6RE49 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30
Identity = 69/137 (50.36%), Postives = 98/137 (71.53%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
MR+P+ PKL+FLKK+ R K F+LL++YNYGF+ E+QFS S+TPL +++ + R RD+
Sbjct: 25 MRKPVIPKLIFLKKARRLKKFKLLKHYNYGFLEEYQFSASSTPLIHYHKNHFKSRRLRDI 84
Query: 61 YSVLFPCRCFGSFGVQSEGDGDYRVEE-EALPAIEGRFSEALDWSESSDEDNSIDRRAEL 120
YS+ F C C GS + +GD DYR+E ALPAI G+F E D S DE++S+D+RAE
Sbjct: 85 YSMFFLCACLGSLRAE-KGDADYRLESLPALPAIAGQFLEPFD---SGDEEDSVDQRAER 144
Query: 121 FIEKFYADMKMERLASV 137
FI +FY +M+M+R S+
Sbjct: 145 FIRRFYEEMRMQRQESL 157
BLAST of Tan0016728 vs. ExPASy TrEMBL
Match:
A0A2N9FQH2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16876 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 6.0e-28
Identity = 70/141 (49.65%), Postives = 98/141 (69.50%), Query Frame = 0
Query: 1 MRRPIFPKLLFLKKSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRGRHRRLRCRDV 60
MR+PI PKL+ LKK+ R K F+LL++YNYG ++++QFSPS+TPL ++R + R RD+
Sbjct: 1 MRKPIIPKLISLKKARRVKRFKLLKHYNYGVLQDYQFSPSSTPLIHYHRKHFKNRRLRDI 60
Query: 61 YSVLFPCRCFGSFGVQSEGDGDYRVEE-EALPAIE----GRFSEALDWSESSDEDNSIDR 120
YS+LF CRC GS + GD D VE ALPA E G+F E LD DE++S+D+
Sbjct: 61 YSMLFLCRCLGSLSAEG-GDADCIVEALPALPAFENTIAGQFLEPLD---PGDEEDSVDQ 120
Query: 121 RAELFIEKFYADMKMERLASV 137
RAE FI++FY +M+M+R S+
Sbjct: 121 RAERFIQRFYEEMRMQRQESI 137
BLAST of Tan0016728 vs. TAIR 10
Match:
AT1G68350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 0
Query: 1 MRRPIFPKLLFLK-KSSRTKNFELLQYYNYGFVREFQFSPSTTPLFRFYRG--RHRRLRC 60
+RRPI P+L + K R+K +LLQ +NY F++E+QFSPS+T + Y + R
Sbjct: 21 LRRPIIPRLKLIPIKQRRSKRVKLLQQHNYKFLQEYQFSPSSTSFIKCYGKSIQISRSGL 80
Query: 61 RDVYSVLFPCRCFGSFGVQSEGDGDYRVEEEALPAIEGRFSEALDWSESSD---EDNSID 120
+ +Y +LF +C G + + +E E G S A + + D ED+SID
Sbjct: 81 KRIYGLLFLSQCIGRYNENDDTITQSWMEMEPFHYALGVASPAREHLQPFDYFSEDDSID 140
Query: 121 RRAELFIEKFYADMKME 132
+AE FIEKFY +M+M+
Sbjct: 141 LKAERFIEKFYDEMRMQ 157
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_038893176.1 | 5.7e-41 | 72.59 | uncharacterized protein LOC120082033 [Benincasa hispida] | [more] |
| XP_022968138.1 | 6.3e-40 | 69.85 | uncharacterized protein LOC111467464 [Cucurbita maxima] | [more] |
| XP_004135396.1 | 4.1e-39 | 67.63 | uncharacterized protein LOC101211232 [Cucumis sativus] | [more] |
| KAE8648793.1 | 4.1e-39 | 67.63 | hypothetical protein Csa_009258 [Cucumis sativus] | [more] |
| KAG7013012.1 | 5.4e-39 | 67.65 | hypothetical protein SDJN02_25767, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HX57 | 3.1e-40 | 69.85 | uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464... | [more] |
| A0A5A7SZQ9 | 1.7e-38 | 67.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A6J1G0E9 | 4.1e-37 | 66.91 | uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC1114495... | [more] |
| A0A5N6RE49 | 3.8e-30 | 50.36 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1 | [more] |
| A0A2N9FQH2 | 6.0e-28 | 49.65 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16876 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G68350.1 | 1.3e-14 | 36.50 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
