Tan0016152 (gene) Snake gourd v1

Overview


Name	Tan0016152
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L13
Location	LG07: 4801334 .. 4803402 (-)
RNA-Seq Expression	Tan0016152
Synteny	Tan0016152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACAGAAGGAACGAAGCTGGAATCGCACAAGGGGGCGCAGAGAGAGAAGAAGGTTCGTTTCAATTTCCTCTGTGTTACGGTCCTCTGCTGGTTTTAATTTGATCTTCGTTTCTCGAAACCTATACAATGTTAGATTAGGGTTAGGATTTTTAGTTCCCTATTTACCAGTCCTGCTCAAGCTGTTCGAGGATTTGGCTTTCTTTTTTCTATCGTTTTCGCCTAGGGTTTTTGGAAGTTATGTGTTCGTGTTAATCCTCTTTTCTTTGGAAAAGAAAAGAAAATAGTTTAAACTAAGTTTGATGTATTTGTGTTAGTGTGTTAAATGGAACTTAACTGGATCGATGTTACACATCTACTAATTTTGTATTTTGTGATATCCAGAACATAAATGAAGTTTATTTTTCTTTGGTTTGAATTTGCTAACTCAAATCATTGAGCAGGTAAGCCATGAAGCACAACAATGTTATCCCTAGTGGGCACTTCAGGAAACATTGGCAAAATTATGTTAAAACTTGGTTCAACCAACCTGCTCGGAAAACAAGGAGAAGGAATGGTGAGTACTTGGGGTTTCTGTTAGTTCATCGTGGTTAAATGTTGTATTGTATTGGATTGTTCTAACTGATATTTATTTCTCTTATGTAAATCGTCACTAGCTCGTCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCTCTTTGGAAGAATTGAAGGTGGGATTATTTTTCAGCTTTTGGAATATTTTGGATGACGTGCAATTATAATTCAGTTAATTCTGTGTTTCGTTTTTTTTTTGACAGATGAATTATTGAAACTGCATCATCATTTTTTTTAAGTATAAACGAACTGGAGTTTTATTTGAAAGCCTTTTTTTTTGCTCGGGCTATGTACTTGGTAAAATTGATTTTTTGGAAGTCTTGCAAGCATGACATGGTGTTTTTAAGTTAAATTTTCAGAATATAAGCACGGTTGTGGATGTCGATTAATGCATATCTTATTGATAGACCCTGATTACATAGGTGTATGAGAGATGGGAACTCTCAAATTGCTGTTGTAGATAAATAAAATTGAGGCTTAGGCCTATCATTTATCTAGAGCATACTAGAGTTGAGTGTCGAATTCAAGAAAATGTTGAACATTTGATGATCATTTGGATTCAAACCATTCCTCTTTCGATTTTTTTCAAAGATTGTTGACAATTTTTTTCGCAAACCAGGCAGCTGGCATTCCAAAGAAATATGCACCAACAATTGGCATTGCAGTTGATCATCGCCGCAGGAACCGCTCCCTGGAGAGTCTTCAAGCTAATGTACAGAGGTTGAAGACCTACAAGGCCAAGGTGGTCGTCTTCCCACGACGTGCCCGCAAATTCAAGGTAACTCTTCCAAGTTCCAACTGTCAAAGTAATACCATTCATTAGTTGCACCATCTTTTTTATTTGTTGGGCTGCCTTGATCTCTGATCAAACATATATCTGTTGATGTAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCTACCCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGCCATCAGTTGAGCTTGTGAAGGTCACAGAAGAGATGAAATCTTTCAAGGCCTATGACAAGCTTCGTATTGAACGAACGAACGCCCGCCATGTTGGTGCTCGGTTGAAGAAGGCTGCCGAAGCAGAGAAGGAAGAGAAGAAGTAAATGGTTCCAAGGTTTTTAACTGCGGCGCCTATATGTTTTGAATGAAAATTCAAGTTTGCTATAGTGTTCGGCATTTATATTTAGTATCTTTTTCCCTGCTTTATATGTGCAAACCTGAGTTATGAGTTCAATTTTGAAATGATTAGAGATTTTTTTAAAGATGAATATCGAACATTCTCGGATTTCATAGATGTTGCCTCTTTTTGCTTCTTATTCATGCGTTTTTGAGAGGTTATTTTGTGACTGAAATATATTTTTAGTCCCTACGTTTTGGGGTGGTTCATAT

mRNA sequence

ACACAGAAGGAACGAAGCTGGAATCGCACAAGGGGGCGCAGAGAGAGAAGAAGGTAAGCCATGAAGCACAACAATGTTATCCCTAGTGGGCACTTCAGGAAACATTGGCAAAATTATGTTAAAACTTGGTTCAACCAACCTGCTCGGAAAACAAGGAGAAGGAATGCTCGTCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCTCTTTGGAAGAATTGAAGGCAGCTGGCATTCCAAAGAAATATGCACCAACAATTGGCATTGCAGTTGATCATCGCCGCAGGAACCGCTCCCTGGAGAGTCTTCAAGCTAATGTACAGAGGTTGAAGACCTACAAGGCCAAGGTGGTCGTCTTCCCACGACGTGCCCGCAAATTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCTACCCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGCCATCAGTTGAGCTTGTGAAGGTCACAGAAGAGATGAAATCTTTCAAGGCCTATGACAAGCTTCGTATTGAACGAACGAACGCCCGCCATGTTGGTGCTCGGTTGAAGAAGGCTGCCGAAGCAGAGAAGGAAGAGAAGAAGTAAATGGTTCCAAGGTTTTTAACTGCGGCGCCTATATGTTTTGAATGAAAATTCAAGTTTGCTATAGTGTTCGGCATTTATATTTAGTATCTTTTTCCCTGCTTTATATGTGCAAACCTGAGTTATGAGTTCAATTTTGAAATGATTAGAGATTTTTTTAAAGATGAATATCGAACATTCTCGGATTTCATAGATGTTGCCTCTTTTTGCTTCTTATTCATGCGTTTTTGAGAGGTTATTTTGTGACTGAAATATATTTTTAGTCCCTACGTTTTGGGGTGGTTCATAT

Coding sequence (CDS)

ATGAAGCACAACAATGTTATCCCTAGTGGGCACTTCAGGAAACATTGGCAAAATTATGTTAAAACTTGGTTCAACCAACCTGCTCGGAAAACAAGGAGAAGGAATGCTCGTCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCTCTTTGGAAGAATTGAAGGCAGCTGGCATTCCAAAGAAATATGCACCAACAATTGGCATTGCAGTTGATCATCGCCGCAGGAACCGCTCCCTGGAGAGTCTTCAAGCTAATGTACAGAGGTTGAAGACCTACAAGGCCAAGGTGGTCGTCTTCCCACGACGTGCCCGCAAATTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCTACCCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGCCATCAGTTGAGCTTGTGAAGGTCACAGAAGAGATGAAATCTTTCAAGGCCTATGACAAGCTTCGTATTGAACGAACGAACGCCCGCCATGTTGGTGCTCGGTTGAAGAAGGCTGCCGAAGCAGAGAAGGAAGAGAAGAAGTAA

Protein sequence

MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKLRIERTNARHVGARLKKAAEAEKEEKK

Homology

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BLAST of Tan0016152 vs. ExPASy Swiss-Prot
Match: P41127 (60S ribosomal protein L13-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13B PE=1 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.8e-94
Identity = 171/206 (83.01%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T EMKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

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BLAST of Tan0016152 vs. ExPASy Swiss-Prot
Match: Q9FF90 (60S ribosomal protein L13-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13D PE=1 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.8e-93
Identity = 169/206 (82.04%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPS HFRKHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+VVFPRR+R+ KAGDSTPEELA ATQVQG YM I   K ++ELVK+T ++K+FKAYDK+
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTNARH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNARHAGARAKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy Swiss-Prot
Match: P41128 (60S ribosomal protein L13-1 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.0e-92
Identity = 169/206 (82.04%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELK+AGIPKK APTIGIAVDHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRARK KAGDST EELA ATQVQG YM I  EK + ELVK+T EMKS KA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AA+AEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAADAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy Swiss-Prot
Match: P41129 (60S ribosomal protein L13-2 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 6.6e-92
Identity = 168/206 (81.55%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGI++DHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRARK KAGDST EELA ATQVQG YM I  EK ++ELVK+T EMKS  AYDK+
Sbjct: 121 KLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AA+AEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAADAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy Swiss-Prot
Match: Q9SMT4 (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13C PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 7.5e-80
Identity = 151/206 (73.30%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+K W+NYVKT FNQPA KTRRR ARQ KAVK FPRPTAGP+RP+VH Q
Sbjct: 1   MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TL YNMKVRAG+GF+LEELKAAGIPKK APTIGI+VDH R+NRSLE  Q NVQRLKTYKA
Sbjct: 61  TLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPR AR  K GDS  +ELA ATQVQ  +M I  E P++ELVK+T +MK F AYDK+
Sbjct: 121 KLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+E  N RH G R K+AAEAEKEEKK
Sbjct: 181 RLEGINKRHAGVRAKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. NCBI nr
Match: XP_022958723.1 (60S ribosomal protein L13-3-like [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 5.9e-106
Identity = 201/206 (97.57%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEK  VELVKVTEEMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTNARHVGARLK+AAEAEKEEKK
Sbjct: 181 RVERTNARHVGARLKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. NCBI nr
Match: XP_008467320.1 (PREDICTED: 60S ribosomal protein L13-3-like [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVKVTE+MKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKVTEDMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ER NARHVGARLKKAAEAEKEEKK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. NCBI nr
Match: XP_004143667.1 (60S ribosomal protein L13-3 [Cucumis sativus] >KAA0055099.1 60S ribosomal protein L13-3-like [Cucumis melo var. makuwa] >KGN50340.1 hypothetical protein Csa_000560 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 199/206 (96.60%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVK+TE+MKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ER NARHVGARLKKAAEAEKEEKK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. NCBI nr
Match: XP_022929155.1 (60S ribosomal protein L13-3-like [Cucurbita moschata] >KAG6579642.1 hypothetical protein SDJN03_24090, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017097.1 hypothetical protein SDJN02_22209 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVK+TE++KSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           RIERTNARHVGARLK+AAEAEKEEKK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. NCBI nr
Match: XP_022995473.1 (60S ribosomal protein L13-3-like [Cucurbita maxima] >XP_023532397.1 60S ribosomal protein L13-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEK  VELVKVTEEMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTNARHVGARLK+AAEAEKEEKK
Sbjct: 181 RVERTNARHVGARLKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy TrEMBL
Match: A0A6J1H3W1 (60S ribosomal protein L13 OS=Cucurbita moschata OX=3662 GN=LOC111459864 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.9e-106
Identity = 201/206 (97.57%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEK  VELVKVTEEMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKAPVELVKVTEEMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTNARHVGARLK+AAEAEKEEKK
Sbjct: 181 RVERTNARHVGARLKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy TrEMBL
Match: A0A1S3CTG8 (60S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103504700 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106
Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVKVTE+MKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKVTEDMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ER NARHVGARLKKAAEAEKEEKK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy TrEMBL
Match: A0A5A7UNR2 (60S ribosomal protein L13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00250 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.4e-106
Identity = 199/206 (96.60%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVK+TE+MKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ER NARHVGARLKKAAEAEKEEKK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy TrEMBL
Match: A0A0A0KKX2 (60S ribosomal protein L13 OS=Cucumis sativus OX=3659 GN=Csa_5G168780 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.4e-106
Identity = 199/206 (96.60%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVK+TE+MKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ER NARHVGARLKKAAEAEKEEKK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. ExPASy TrEMBL
Match: A0A6J1ETG8 (60S ribosomal protein L13 OS=Cucurbita moschata OX=3662 GN=LOC111435822 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.4e-106
Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYV+TWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVK+TE++KSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKL 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           RIERTNARHVGARLK+AAEAEKEEKK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. TAIR 10
Match: AT3G49010.1 (breast basic conserved 1 )

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-95
Identity = 171/206 (83.01%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T EMKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. TAIR 10
Match: AT3G49010.2 (breast basic conserved 1 )

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-95
Identity = 171/206 (83.01%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T EMKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. TAIR 10
Match: AT3G49010.3 (breast basic conserved 1 )

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-95
Identity = 171/206 (83.01%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T EMKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. TAIR 10
Match: AT5G23900.1 (Ribosomal protein L13e family protein )

HSP 1 Score: 341.3 bits (874), Expect = 5.5e-94
Identity = 169/206 (82.04%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIPS HFRKHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+VVFPRR+R+ KAGDSTPEELA ATQVQG YM I   K ++ELVK+T ++K+FKAYDK+
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTNARH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNARHAGARAKRAAEAEKEEKK 206

[Close]

BLAST of Tan0016152 vs. TAIR 10
Match: AT3G49010.4 (breast basic conserved 1 )

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-93
Identity = 170/206 (82.52%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MKHNNVIPSGHFRKHWQNYVKTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYVKTWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKVTEEMKSFKAYDKL 180
           K+V+FPRRAR  KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T EMKSFKA+DK+
Sbjct: 121 KLVIFPRRAR--KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RIERTNARHVGARLKKAAEAEKEEKK 207
           R+ERTN RH GAR K+AAEAEKEEKK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 204

The following BLAST results are available for this feature:

BLAST of Tan0016152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41127	1.8e-94	83.01	60S ribosomal protein L13-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13B PE=1 SV=1	[more]
Q9FF90	7.8e-93	82.04	60S ribosomal protein L13-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13D PE=1 SV=1	[more]
P41128	5.0e-92	82.04	60S ribosomal protein L13-1 OS=Brassica napus OX=3708 PE=2 SV=1	[more]
P41129	6.6e-92	81.55	60S ribosomal protein L13-2 OS=Brassica napus OX=3708 PE=2 SV=1	[more]
Q9SMT4	7.5e-80	73.30	Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13C P...	[more]

BLAST of Tan0016152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958723.1	5.9e-106	97.57	60S ribosomal protein L13-3-like [Cucurbita moschata]	[more]
XP_008467320.1	1.0e-105	97.09	PREDICTED: 60S ribosomal protein L13-3-like [Cucumis melo]	[more]
XP_004143667.1	1.3e-105	96.60	60S ribosomal protein L13-3 [Cucumis sativus] >KAA0055099.1 60S ribosomal protei...	[more]
XP_022929155.1	1.3e-105	96.60	60S ribosomal protein L13-3-like [Cucurbita moschata] >KAG6579642.1 hypothetical...	[more]
XP_022995473.1	2.2e-105	97.09	60S ribosomal protein L13-3-like [Cucurbita maxima] >XP_023532397.1 60S ribosoma...	[more]

BLAST of Tan0016152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3W1	2.9e-106	97.57	60S ribosomal protein L13 OS=Cucurbita moschata OX=3662 GN=LOC111459864 PE=3 SV=...	[more]
A0A1S3CTG8	4.9e-106	97.09	60S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103504700 PE=3 SV=1	[more]
A0A5A7UNR2	6.4e-106	96.60	60S ribosomal protein L13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0KKX2	6.4e-106	96.60	60S ribosomal protein L13 OS=Cucumis sativus OX=3659 GN=Csa_5G168780 PE=3 SV=1	[more]
A0A6J1ETG8	6.4e-106	96.60	60S ribosomal protein L13 OS=Cucurbita moschata OX=3662 GN=LOC111435822 PE=3 SV=...	[more]

BLAST of Tan0016152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49010.1	1.3e-95	83.01	breast basic conserved 1	[more]
AT3G49010.2	1.3e-95	83.01	breast basic conserved 1	[more]
AT3G49010.3	1.3e-95	83.01	breast basic conserved 1	[more]
AT5G23900.1	5.5e-94	82.04	Ribosomal protein L13e family protein	[more]
AT3G49010.4	1.2e-93	82.52	breast basic conserved 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..206
None	No IPR available	GENE3D	1.20.5.110		coord: 166..206 e-value: 2.5E-14 score: 55.0
None	No IPR available	PANTHER	PTHR11722:SF11	60S RIBOSOMAL PROTEIN L13	coord: 2..206
IPR001380	Ribosomal protein L13e	PFAM	PF01294	Ribosomal_L13e	coord: 6..184 e-value: 1.8E-77 score: 259.3
IPR001380	Ribosomal protein L13e	PANTHER	PTHR11722	60S RIBOSOMAL PROTEIN L13	coord: 2..206
IPR001380	Ribosomal protein L13e	HAMAP	MF_00499	Ribosomal_L13e	coord: 44..127 score: 21.771833
IPR018256	Ribosomal protein L13e, conserved site	PROSITE	PS01104	RIBOSOMAL_L13E	coord: 69..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016152.1	Tan0016152.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome