Tan0015631 (gene) Snake gourd v1

Overview


Name	Tan0015631
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG01: 25738662 .. 25739293 (-)
RNA-Seq Expression	Tan0015631
Synteny	Tan0015631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAACCCAAAAATTAGAGGGTGGTTAAGCTATAATTCCGGATTACTGAAATTCCCACAACCAAATCCCCAATTTAAAACCCTAAAATTCGTCTCCATCAATCCCCAATTCTCCCCGTAAAATTCCCCAAATCCAAAACCCTCTCTCCGTCGTCTTCCTCCTCTGTAACCATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGATCGGACTCCGACAGAGACCGCGACCACCAAGATTATTTCTCTGATCCCTCTCACTCGCCGGAGAGAAGCTGGTCCGGCAACCTCTCGTTCCGGCCTCCCACTCGCCAAAACAGAGGAGGGTTTCGGGCCATGGCGGAGAAGAAGGTGGCGCCGATGGGCCACCGCCGTCTTCACAGTACCGGCGCCGTCGCTTTCGGCGGCCCCGGTAAGGAGCCCAGGCTGATTAGAAGCTCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCCATTCGAGAGGAAAAGGGGCCATCTGCCAATTCCTAACAACTTACTAACTTCTTTTTTTTTTCCTTGTTCTTTTCTATTTTTTTATTATATATATATATTTGAAATTTGTTTGGACATGAATATATAAAAAAGTAGAAGGAATGGGGAGA

mRNA sequence

CATTAACCCAAAAATTAGAGGGTGGTTAAGCTATAATTCCGGATTACTGAAATTCCCACAACCAAATCCCCAATTTAAAACCCTAAAATTCGTCTCCATCAATCCCCAATTCTCCCCGTAAAATTCCCCAAATCCAAAACCCTCTCTCCGTCGTCTTCCTCCTCTGTAACCATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGATCGGACTCCGACAGAGACCGCGACCACCAAGATTATTTCTCTGATCCCTCTCACTCGCCGGAGAGAAGCTGGTCCGGCAACCTCTCGTTCCGGCCTCCCACTCGCCAAAACAGAGGAGGGTTTCGGGCCATGGCGGAGAAGAAGGTGGCGCCGATGGGCCACCGCCGTCTTCACAGTACCGGCGCCGTCGCTTTCGGCGGCCCCGGTAAGGAGCCCAGGCTGATTAGAAGCTCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCCATTCGAGAGGAAAAGGGGCCATCTGCCAATTCCTAACAACTTACTAACTTCTTTTTTTTTTCCTTGTTCTTTTCTATTTTTTTATTATATATATATATTTGAAATTTGTTTGGACATGAATATATAAAAAAGTAGAAGGAATGGGGAGA

Coding sequence (CDS)

ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGATCGGACTCCGACAGAGACCGCGACCACCAAGATTATTTCTCTGATCCCTCTCACTCGCCGGAGAGAAGCTGGTCCGGCAACCTCTCGTTCCGGCCTCCCACTCGCCAAAACAGAGGAGGGTTTCGGGCCATGGCGGAGAAGAAGGTGGCGCCGATGGGCCACCGCCGTCTTCACAGTACCGGCGCCGTCGCTTTCGGCGGCCCCGGTAAGGAGCCCAGGCTGATTAGAAGCTCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCCATTCGAGAGGAAAAGGGGCCATCTGCCAATTCCTAA

Protein sequence

MSLNCLSCQLLQRSDSDRDRDHQDYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAMAEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS

Homology

[Close]

BLAST of Tan0015631 vs. NCBI nr
Match: XP_022952265.1 (uncharacterized protein LOC111454968 [Cucurbita moschata] >KAG6596735.1 hypothetical protein SDJN03_09915, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028271.1 hypothetical protein SDJN02_09452, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.0 bits (476), Expect = 4.7e-44
Identity = 93/116 (80.17%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MSLNCLSCQL-LQRSDSDRDRDHQDYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAMAE 60
           MSLNCLSCQL LQRSDSD+D +  +YF+D + SP+RSWSGNLSFRPPTRQN  GFR   E
Sbjct: 1   MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTE 60

Query: 61  KKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS 116
            KVAPMGHRRLHSTGAVAFGGPGKEPRLIRS+GMRRDWSFEDLRAIRE+K  S NS
Sbjct: 61  NKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSFEDLRAIREDKESSPNS 116

[Close]

BLAST of Tan0015631 vs. NCBI nr
Match: XP_023539506.1 (uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43
Identity = 93/116 (80.17%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MSLNCLSCQL-LQRSDSDRDRDHQDYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAMAE 60
           MSLNCLSCQL LQRSDSD+D +  +YF+D + SP+RSWSGNLSFRPPTRQN  GFR   E
Sbjct: 1   MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTE 60

Query: 61  KKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS 116
            KVAP GHRRLHSTGAVAFGGPGKEPRLIRS+GMRRDWSFEDLRAIREEK  S NS
Sbjct: 61  NKVAPTGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSFEDLRAIREEKESSPNS 116

[Close]

BLAST of Tan0015631 vs. NCBI nr
Match: XP_038905810.1 (uncharacterized protein LOC120091761 [Benincasa hispida])

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-32
Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQ---DYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAM 60
           MSLNCLSCQ+LQR+DS+R RD Q    Y SD   S ERSWSGNLSFRP  R NRGGFR +
Sbjct: 1   MSLNCLSCQILQRTDSERHRDQQIQTYYASDEFDSSERSWSGNLSFRPHDRHNRGGFRGL 60

Query: 61  AEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSA 114
            E KVAP+ HRR     AV+FG  GKEPRL+RSSGMRRDWSFEDLR IREE+ PSA
Sbjct: 61  PENKVAPISHRR-----AVSFG--GKEPRLVRSSGMRRDWSFEDLRTIREEREPSA 109

[Close]

BLAST of Tan0015631 vs. NCBI nr
Match: XP_031737872.1 (uncharacterized protein LOC116402546 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-29
Identity = 84/130 (64.62%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQ---DYFSDPSHSPERSWSGNLSFRPPTRQNRG----- 60
           MSLNCLSCQ+LQR+DS+R RD Q    Y SD  +S ERSWSGNL  RP    NRG     
Sbjct: 1   MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRP----NRGGGGGG 60

Query: 61  -------GFRAMAEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAI 116
                  GFR MA+ KVAP+GHRR     AV+FG  GKEPRLIRSSGMRRDWSFEDLRAI
Sbjct: 61  GGGGGGRGFRGMADNKVAPIGHRR-----AVSFG--GKEPRLIRSSGMRRDWSFEDLRAI 119

[Close]

BLAST of Tan0015631 vs. NCBI nr
Match: XP_008448684.1 (PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo] >KAA0053043.1 uncharacterized protein E6C27_scaffold344G001590 [Cucumis melo var. makuwa] >TYK11498.1 uncharacterized protein E5676_scaffold139G001620 [Cucumis melo var. makuwa])

HSP 1 Score: 136.0 bits (341), Expect = 2.1e-28
Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQ---DYFSDPSHSPERSWSGNLSFRPPTRQNRGG-FRA 60
           MSLNCLSCQLLQR+DS+R RD Q    Y SD     +RSWSGNLS     RQNRGG FR 
Sbjct: 1   MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRG 60

Query: 61  MAEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS 116
           MA+ KVAP+ HRR     AV+FG  GKEPRL+RSSGMRRDWSFEDLR IREEK PS NS
Sbjct: 61  MADNKVAPVCHRR-----AVSFG--GKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS 108

[Close]

BLAST of Tan0015631 vs. ExPASy TrEMBL
Match: A0A6J1GL99 (uncharacterized protein LOC111454968 OS=Cucurbita moschata OX=3662 GN=LOC111454968 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 93/116 (80.17%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MSLNCLSCQL-LQRSDSDRDRDHQDYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAMAE 60
           MSLNCLSCQL LQRSDSD+D +  +YF+D + SP+RSWSGNLSFRPPTRQN  GFR   E
Sbjct: 1   MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTE 60

Query: 61  KKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS 116
            KVAPMGHRRLHSTGAVAFGGPGKEPRLIRS+GMRRDWSFEDLRAIRE+K  S NS
Sbjct: 61  NKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSFEDLRAIREDKESSPNS 116

[Close]

BLAST of Tan0015631 vs. ExPASy TrEMBL
Match: A0A0A0L198 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011635 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.1e-30
Identity = 84/126 (66.67%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQ---DYFSDPSHSPERSWSGNLSFRPPTRQNRG----- 60
           MSLNCLSCQ+LQR+DS+R RD Q    Y SD  +S ERSWSGNL  RP    NRG     
Sbjct: 1   MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRP----NRGGGGGG 60

Query: 61  ---GFRAMAEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEK 116
              GFR MA+ KVAP+GHRR     AV+FG  GKEPRLIRSSGMRRDWSFEDLRAIREEK
Sbjct: 61  GGRGFRGMADNKVAPIGHRR-----AVSFG--GKEPRLIRSSGMRRDWSFEDLRAIREEK 115

[Close]

BLAST of Tan0015631 vs. ExPASy TrEMBL
Match: A0A5A7UAS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001620 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.0e-28
Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQ---DYFSDPSHSPERSWSGNLSFRPPTRQNRGG-FRA 60
           MSLNCLSCQLLQR+DS+R RD Q    Y SD     +RSWSGNLS     RQNRGG FR 
Sbjct: 1   MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRG 60

Query: 61  MAEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS 116
           MA+ KVAP+ HRR     AV+FG  GKEPRL+RSSGMRRDWSFEDLR IREEK PS NS
Sbjct: 61  MADNKVAPVCHRR-----AVSFG--GKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS 108

[Close]

BLAST of Tan0015631 vs. ExPASy TrEMBL
Match: A0A1S3BJN6 (uncharacterized protein LOC103490783 OS=Cucumis melo OX=3656 GN=LOC103490783 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.0e-28
Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQ---DYFSDPSHSPERSWSGNLSFRPPTRQNRGG-FRA 60
           MSLNCLSCQLLQR+DS+R RD Q    Y SD     +RSWSGNLS     RQNRGG FR 
Sbjct: 1   MSLNCLSCQLLQRTDSERHRDRQIQTYYTSDEFDPSQRSWSGNLSL----RQNRGGVFRG 60

Query: 61  MAEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEKGPSANS 116
           MA+ KVAP+ HRR     AV+FG  GKEPRL+RSSGMRRDWSFEDLR IREEK PS NS
Sbjct: 61  MADNKVAPVCHRR-----AVSFG--GKEPRLVRSSGMRRDWSFEDLRTIREEKEPSPNS 108

[Close]

BLAST of Tan0015631 vs. ExPASy TrEMBL
Match: A0A6J1L834 (uncharacterized protein LOC111500186 OS=Cucurbita maxima OX=3661 GN=LOC111500186 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.6e-28
Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDH--QDYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAMA 60
           M+LNCLSCQLLQR+DS+RD D   Q+Y+S       RSWSGNLSFRPP R  +   RA+ 
Sbjct: 1   MTLNCLSCQLLQRTDSERDPDPQLQNYYSGQIEPSGRSWSGNLSFRPPDRPKKEALRALP 60

Query: 61  EKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREEK 110
           E +  P+  RRLHS+G ++ G   KEP+L+RSSGMRRDWSFEDLRAIREEK
Sbjct: 61  EDQAPPVAPRRLHSSGPISLG--SKEPKLVRSSGMRRDWSFEDLRAIREEK 109

[Close]

BLAST of Tan0015631 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-12
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRD---RDHQDYFSDPSHSPERSWSGNLSFRPPTRQNRGGFRAM 60
           MSLNCL+C +LQR+DSDRD   R    +  + + S       N S  P  R+        
Sbjct: 1   MSLNCLACHILQRTDSDRDMGSRKDSSFKENFATSAFEKMVRNRSSLPVVRR-------- 60

Query: 61  AEKKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSSGMRRDWSFEDLRAIREE 109
                   GHRRL+S   + + G   EP+L+RSSG+RRDWSFEDL+  +++
Sbjct: 61  -----VNKGHRRLYSADIMVY-GELDEPKLVRSSGIRRDWSFEDLKKHKDQ 97

[Close]

BLAST of Tan0015631 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 52/132 (39.39%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 1   MSLNCLSCQLLQRSDSDRDRDHQDYFSDP-----------------SHSPERSWSGNLSF 60
           MSLNCLSCQ L R+DS++D D     S P                 +    R+WSGNLS 
Sbjct: 1   MSLNCLSCQALPRTDSNKDVD----LSGPGPPRVEINNVLGKTCCVNPIGGRNWSGNLSP 60

Query: 61  RPPTRQNR-GGFRAMAEKKVAPMGHRRLHS-TGAVAFGGPGK--EPRLIRSSGMRRDWSF 110
           R   +  R G   A   KKV  + H RL    G+     P +  +P+L+RS+G+RR+WSF
Sbjct: 61  RIYEKIGRPGSSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSF 120

The following BLAST results are available for this feature:

BLAST of Tan0015631 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0015631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952265.1	4.7e-44	80.17	uncharacterized protein LOC111454968 [Cucurbita moschata] >KAG6596735.1 hypothet...	[more]
XP_023539506.1	1.0e-43	80.17	uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]	[more]
XP_038905810.1	4.1e-32	69.83	uncharacterized protein LOC120091761 [Benincasa hispida]	[more]
XP_031737872.1	2.5e-29	64.62	uncharacterized protein LOC116402546 [Cucumis sativus]	[more]
XP_008448684.1	2.1e-28	68.07	PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo] >KAA0053043.1 unc...	[more]

BLAST of Tan0015631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GL99	2.3e-44	80.17	uncharacterized protein LOC111454968 OS=Cucurbita moschata OX=3662 GN=LOC1114549...	[more]
A0A0A0L198	4.1e-30	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011635 PE=4 SV=1	[more]
A0A5A7UAS3	1.0e-28	68.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BJN6	1.0e-28	68.07	uncharacterized protein LOC103490783 OS=Cucumis melo OX=3656 GN=LOC103490783 PE=...	[more]
A0A6J1L834	8.6e-28	62.16	uncharacterized protein LOC111500186 OS=Cucurbita maxima OX=3661 GN=LOC111500186...	[more]

BLAST of Tan0015631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35215.1	6.6e-12	39.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G46770.1	1.4e-09	39.39	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..47
None	No IPR available	PANTHER	PTHR36019:SF3	PLANT/PROTEIN	coord: 1..109
None	No IPR available	PANTHER	PTHR36019	PLANT/PROTEIN	coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015631.1	Tan0015631.1	mRNA