Tan0013638 (gene) Snake gourd v1

Overview


Name	Tan0013638
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Methyl-CpG-binding domain-containing protein 4
Location	LG06: 7810986 .. 7813290 (+)
RNA-Seq Expression	Tan0013638
Synteny	Tan0013638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCAGCGGCTTCTTTAATGCAACTGACATCAAATTCCGCTGAGATTGGATACAGAGAGAAAATCGTCAGGCGACATGGCCGCCGCTAGGCCTCCAAAAACGCCGATGAAGGTATGGCCGGAACCCTATCCTCTTCCTCCGATTTTTTTTTTTTTTACAATTTCCTTCACAATTTCCCTTCTGATCGGATTCAATTTTCTTTCATTTTGGCTTCTCGAAAATTGTAACCCTTAAATTCTGAAGATCCAAATGGGAATTAGGTTACAAGAAAAAGGGTATAATAAAGCTGATGCTGCTTGGAGCTGGTTATACCTTTACTTCCTTGTCTAAGAAGTACTATGGAATATGCGAAGTTTTGTTTAGAATGTTACATGATAAATAGGGGCATTTGAATTTATGATCTTAATGAGTAGAGAGATTATCACTTGAGTTTATGCTTAACTATGAAAACAAGCTACGTACCAAACTTGTTAGCTTCTGTCGTGTAGTTATCTAAGGATTTCATATTTACGAGTTCTTTTAGAAATCAAAATGTAGTAGGGTTTGGCAGTTGGTTTAGATGCATGCTAGTTGGTCCTGATACTCAAGGATATAAAAGGAAAAAAGCTTGATATTAGTTTGGAGGTCCATTTTATAAGTATTTTGTGAGAATTAGTGCTCCTTTGGATCTTTAAGCAGCAATTCAAACATAATCTTATAGAATTTCATCAACGTGCAAGTGACTTAAAAATATTTGTCGGCTATGGCTGTAGGAAAGTTATTTTGATGTTCAGATTTAGCTGTTCTGGGACACTCAATTTTGTTCGGTTAGGCTTGTTTGATAACCATGTTTTTTGTTGTTGGTTTTTGAAAATTAAGCTTATAAATACTACTCCCACCTACGGTTTTCCTTCTTTGTTTTGTTATCTACTTTTTACCTATGTTTTCTAAACCAAGCCAAGTTTTGAAAAATAAAAAAGTAGTTTTCAAAAATTGTTTTTGTTTTTGACATTTGGCTGACAATTCAAATGTTTTGTTAGGAAAGATGAAACTCATGATAGAGAATTGATAAGGAAAAAAAACACAATTTTCAAAAACCAAAGTGCTTTACATATGGTCTTTTCTGTTTTATTTTAGGATATAGTGAATTTTATGAAAATTTTGAGTACATGGGATTTGCTAAGACTGTTTTACAAAGTCCAAAGTTTATTTAAACTCATATCATCAGTGGATCAATTTGATTTTTCCAAATCTCGAAATTTAAAGTAAAAGTTATCCAAATCTCGAAATTTAAAGTAAAAGTTAGAGATCAAAGTGAATTCTCTCTCAAGTTTAAGGAATCAGAAGTATGACTTTTACAAATTCTTAACTTAGAACTTGCTGGGGATCTTTGTTTGTAGTGCATTGGGTTTTGAATCTATAAATAACAAGTCCATGTGAATTATTGGAAGCCCCTTTTGGTGTAATCTAAGATGCTATTGGTTTCTCTTTACAGGCACCAGGGCTGCCAGTAGGTCTGTATGCTGCTCAATGTGAGGAATGTTTCAAATGGAGGTTGATAAGCACCCAAGAGGAGTACGAGGACATTAGAAGCAAACTAATTGAAGAACCCTTTACTTGCCATAGGAAAGCCGAAACTTCTTGTGAGGACCCTCCCGATATTGACTACGATACAACTCGAACTTGGGTCATTGACAAACCTAATATCCCAAAGACCCCAGAAGGTTTCAAGAGACGTTTGGTGCTGAGAAGGAATTTCTCTAAATTAGATGCTTATTACGTCACACCGATCGGGAAGACGGTGAGATCATCTACAGAGATGCTAGCCTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAAACTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTGAGAGAGGGCTTGAATAGCAGCAGTGCCAAAAGAATTAAAAAAACAAAGGATGAATCTCATAAAAAAAAAACAAAGGATGAATCTGTTGAAAGAGGACTTGAATACTGACTGAAGATGACATACAGTTCCTTGTAGCATTCAAGTTTCTGTGCTTTGAGAAACCAGTTAATGAAAGGATGATTCTGCTGCTGTTGATCTAAGCTCTTGTTAATGGTGGTTTTGTTCTGTTTTGACTTAAAGGTGTGGAGTGGTGATTCTCCTCCTACTATTGTACCATTTTCTTATGGAAAATTGTGGAATATTGTATCATATGGCCATGTTTGATGACACTGAGAAGATTCTTGGACTTTGGTTGGTTGGAAAAATCCAATTTTACCCCTAACACATGGTAAGTGGTA

mRNA sequence

TTAGCAGCGGCTTCTTTAATGCAACTGACATCAAATTCCGCTGAGATTGGATACAGAGAGAAAATCGTCAGGCGACATGGCCGCCGCTAGGCCTCCAAAAACGCCGATGAAGGCACCAGGGCTGCCAGTAGGTCTGTATGCTGCTCAATGTGAGGAATGTTTCAAATGGAGGTTGATAAGCACCCAAGAGGAGTACGAGGACATTAGAAGCAAACTAATTGAAGAACCCTTTACTTGCCATAGGAAAGCCGAAACTTCTTGTGAGGACCCTCCCGATATTGACTACGATACAACTCGAACTTGGGTCATTGACAAACCTAATATCCCAAAGACCCCAGAAGGTTTCAAGAGACGTTTGGTGCTGAGAAGGAATTTCTCTAAATTAGATGCTTATTACGTCACACCGATCGGGAAGACGGTGAGATCATCTACAGAGATGCTAGCCTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAAACTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTGAGAGAGGGCTTGAATAGCAGCAGTGCCAAAAGAATTAAAAAAACAAAGGATGAATCTCATAAAAAAAAAACAAAGGATGAATCTGTTGAAAGAGGACTTGAATACTGACTGAAGATGACATACAGTTCCTTGTAGCATTCAAGTTTCTGTGCTTTGAGAAACCAGTTAATGAAAGGATGATTCTGCTGCTGTTGATCTAAGCTCTTGTTAATGGTGGTTTTGTTCTGTTTTGACTTAAAGGTGTGGAGTGGTGATTCTCCTCCTACTATTGTACCATTTTCTTATGGAAAATTGTGGAATATTGTATCATATGGCCATGTTTGATGACACTGAGAAGATTCTTGGACTTTGGTTGGTTGGAAAAATCCAATTTTACCCCTAACACATGGTAAGTGGTA

Coding sequence (CDS)

ATGGCCGCCGCTAGGCCTCCAAAAACGCCGATGAAGGCACCAGGGCTGCCAGTAGGTCTGTATGCTGCTCAATGTGAGGAATGTTTCAAATGGAGGTTGATAAGCACCCAAGAGGAGTACGAGGACATTAGAAGCAAACTAATTGAAGAACCCTTTACTTGCCATAGGAAAGCCGAAACTTCTTGTGAGGACCCTCCCGATATTGACTACGATACAACTCGAACTTGGGTCATTGACAAACCTAATATCCCAAAGACCCCAGAAGGTTTCAAGAGACGTTTGGTGCTGAGAAGGAATTTCTCTAAATTAGATGCTTATTACGTCACACCGATCGGGAAGACGGTGAGATCATCTACAGAGATGCTAGCCTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAAACTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTGAGAGAGGGCTTGAATAGCAGCAGTGCCAAAAGAATTAAAAAAACAAAGGATGAATCTCATAAAAAAAAAACAAAGGATGAATCTGTTGAAAGAGGACTTGAATACTGA

Protein sequence

MAAARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETSCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEMLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDESHKKKTKDESVERGLEY

Homology

[Close]

BLAST of Tan0013638 vs. ExPASy Swiss-Prot
Match: Q9LYB9 (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-52
Identity = 91/149 (61.07%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 4   ARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETSCE 63
           A+P      APG  +  YAAQC+ C KWR+I +QEEYEDIRSK++E+PF C +K   SCE
Sbjct: 11  AKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCE 70

Query: 64  DPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEMLA 123
           +P DIDYD++RTWVIDKP +PKTP+GFKR LVLR+++SK+D YY TP GK +RS  E+ A
Sbjct: 71  EPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAA 130

Query: 124 FVEANPQYKDIPLSNFSFAVPKVMEETVP 153
           FVEANP++++ PL +F+F VPKVME+TVP
Sbjct: 131 FVEANPEFRNAPLGDFNFTVPKVMEDTVP 159

[Close]

BLAST of Tan0013638 vs. ExPASy Swiss-Prot
Match: Q5XEN5 (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.7e-47
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 14  PGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETSCEDPPDIDYDTT 73
           PG  + ++A QCE+C KWR I TQ+EYEDIRS++ E+PF C  K   SCED  D++YD++
Sbjct: 48  PGRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSS 107

Query: 74  RTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEMLAFVEANPQYKD 133
           RTWVIDKP +P+TP GFKR L+LR+++SK+DAYY+TP GK ++S  E+ AF++AN  YK 
Sbjct: 108 RTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKY 167

Query: 134 IPLSNFSFAVPKVMEETVPESILREGLNSSSAK 167
             L +F+F VPKVMEETVP  IL +     S K
Sbjct: 168 ALLGDFNFTVPKVMEETVPSGILSDRTPKPSRK 200

[Close]

BLAST of Tan0013638 vs. ExPASy Swiss-Prot
Match: Q8LA53 (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.6e-26
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 18  VGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHR----KAETSCEDPPDIDYDTT 77
           +G +  QC  CFKWRL+ + ++YE+IR +L+E PF C      K + SC+ P DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 78  RTWVIDKPNIPKTPEGFKRRLVLRRNFSK--LDAYYVTPIGKTVRSSTEMLAFVEANPQY 137
           R W IDKPNI + P G++R L +R        D YYV P GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 138 --KDIPLSNFSFAVPKVMEE 150
             + + LS FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of Tan0013638 vs. ExPASy Swiss-Prot
Match: Q4PSK1 (Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=MBD3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-22
Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 21  YAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETSCEDPPD--IDYDT-TRTWV 80
           YAAQC +C K R I +QE+YE+IRSK +E+ F C R     CE+P D  +++D+ T  W 
Sbjct: 12  YAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTMRWF 71

Query: 81  IDKPNIPKTPEGFKRRLVLRRNFSKLDAYY--VTPIGKTVRSSTEMLAFVEANPQYKDIP 140
            D+ +IPKTP+G KR LV+R N  K+D YY  + P  K  +S  E+  F+E   ++KD+ 
Sbjct: 72  QDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFKDMT 131

Query: 141 LSNFSFAVPK 146
           L   SFA PK
Sbjct: 132 LEEVSFAAPK 136

[Close]

BLAST of Tan0013638 vs. ExPASy Swiss-Prot
Match: Q9FZP6 (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-14
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 24  QCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKA----ETSCEDPPDIDYDTTRTWVID 83
           QC +C KWRLI + + Y  I+   ++ PF C   +      SC  P   D  T  TW   
Sbjct: 3   QCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQ--DGTTCDTW--- 62

Query: 84  KPNIPKTPEGFKRRLVLRRNFSKL-DAYYVTPIGKTVRSSTEMLAFVEANPQY--KDIPL 143
            P+IP  P G+ R + +R   +K  D YY  P G+ +RSS E+ +F++ +P+Y  + +  
Sbjct: 63  -PSIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNR 122

Query: 144 SNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDESHKKKTKDESVERG 189
           S FSF +PK +++   +               K+T+    +K +KD + E+G
Sbjct: 123 SQFSFQIPKPLDDNYVK---------------KRTRPVKRRKSSKDNNCEKG 153

[Close]

BLAST of Tan0013638 vs. NCBI nr
Match: XP_038896997.1 (methyl-CpG-binding domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83
Identity = 155/175 (88.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MAAARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAET 60
           MAAARPPKTP+K+  LPVGL+AAQCEECFKWRLISTQEEYEDIRSK+IEEPFTC RK +T
Sbjct: 30  MAAARPPKTPVKSARLPVGLFAAQCEECFKWRLISTQEEYEDIRSKMIEEPFTCPRKTDT 89

Query: 61  SCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTE 120
           SC++PPDIDYDTTRTW IDKPNIPKTP GF RRLVLR+NFSK DAYYVTP GKTVRSSTE
Sbjct: 90  SCDNPPDIDYDTTRTWGIDKPNIPKTPHGFTRRLVLRKNFSKFDAYYVTPTGKTVRSSTE 149

Query: 121 MLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           MLAFVEANP+YKDIPLS+FSFAVPKVMEETVPESIL+EGLNSSSAKRIKKTKDES
Sbjct: 150 MLAFVEANPEYKDIPLSSFSFAVPKVMEETVPESILKEGLNSSSAKRIKKTKDES 204

[Close]

BLAST of Tan0013638 vs. NCBI nr
Match: XP_023513509.1 (methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 5.5e-82
Identity = 155/176 (88.07%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MAAARPPK-TPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAE 60
           MAA +PPK TP KAPGLPVGLYAAQCEECFKWRLIS+QEEYEDIRS+LIEEPFTCHRK +
Sbjct: 1   MAAVKPPKTTPAKAPGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTD 60

Query: 61  TSCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSST 120
           TSCEDPPDIDYDTTRTWVIDKPN+PKTP+GFKRRLVLRRNFSKLDAYYVTP GKTVRSST
Sbjct: 61  TSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSST 120

Query: 121 EMLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           +M+AFVEANPQYKDIPLS+FSFAVPKVMEETVPESIL+ G   SS KR KKTKDES
Sbjct: 121 KMIAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILKSGF--SSCKRSKKTKDES 174

[Close]

BLAST of Tan0013638 vs. NCBI nr
Match: XP_023004659.1 (methyl-CpG-binding domain-containing protein 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 9.4e-82
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MAAARPPK-TPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAE 60
           MAA +PPK TP KAPGLPVGLYAAQCEECFKWRLIS+QEEYEDIRS+LIEEPFTCHRK +
Sbjct: 1   MAAVKPPKTTPAKAPGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTD 60

Query: 61  TSCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSST 120
           TSCEDPPDIDYDTTRTWVIDKPN+PKTP+GFKRRLVLRRNFSKLDAYYVTP GKTVRSST
Sbjct: 61  TSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSST 120

Query: 121 EMLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           +ML FVEANPQYKDIPLS+FSFAVPKVMEETVPESIL+ G   SS KR KKTKDES
Sbjct: 121 KMLTFVEANPQYKDIPLSDFSFAVPKVMEETVPESILKSGF--SSCKRSKKTKDES 174

[Close]

BLAST of Tan0013638 vs. NCBI nr
Match: XP_022960475.1 (methyl-CpG-binding domain-containing protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MAAARPPK-TPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAE 60
           MAA +PPK TP KAPGLPVGLYAAQCEECFKWRLIS+QEEYEDIRS+LIEEPFTCHRK +
Sbjct: 1   MAAVKPPKTTPAKAPGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTD 60

Query: 61  TSCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSST 120
           TSCEDPPDIDYDTTRTWVIDKPN+PKTP+GFKRRLVLRRNFSKLDAYYVTP GKTVRSST
Sbjct: 61  TSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSST 120

Query: 121 EMLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           +MLAFVEANPQYKDIPLS+FSFAVPKVMEETVPESIL+     SS KR KKTKDES
Sbjct: 121 KMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILKSCF--SSCKRSKKTKDES 174

[Close]

BLAST of Tan0013638 vs. NCBI nr
Match: XP_004148873.1 (methyl-CpG-binding domain-containing protein 4 [Cucumis sativus] >KGN44852.1 hypothetical protein Csa_016159 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 4.7e-81
Identity = 152/174 (87.36%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 2   AAARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETS 61
           AA RPPKTP K+  LPVGL+AAQCEECFKWRLISTQEEYE IRSK+IEEPFTC RK +TS
Sbjct: 4   AADRPPKTPTKSTRLPVGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQRKTDTS 63

Query: 62  CEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEM 121
           CEDPPDIDYDTTRTW IDKPNIPKTPEGF RRLVLR+NF+K DAYYVTP GKTVRSSTE+
Sbjct: 64  CEDPPDIDYDTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSSTEV 123

Query: 122 LAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           LAFVEANPQYKDI LSNFSFAVPK+MEETVPESIL+EGLNSSSAKRIKKTK+ES
Sbjct: 124 LAFVEANPQYKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNES 177

[Close]

BLAST of Tan0013638 vs. ExPASy TrEMBL
Match: A0A6J1KWY1 (methyl-CpG-binding domain-containing protein 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497887 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.5e-82
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MAAARPPK-TPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAE 60
           MAA +PPK TP KAPGLPVGLYAAQCEECFKWRLIS+QEEYEDIRS+LIEEPFTCHRK +
Sbjct: 1   MAAVKPPKTTPAKAPGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTD 60

Query: 61  TSCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSST 120
           TSCEDPPDIDYDTTRTWVIDKPN+PKTP+GFKRRLVLRRNFSKLDAYYVTP GKTVRSST
Sbjct: 61  TSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSST 120

Query: 121 EMLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           +ML FVEANPQYKDIPLS+FSFAVPKVMEETVPESIL+ G   SS KR KKTKDES
Sbjct: 121 KMLTFVEANPQYKDIPLSDFSFAVPKVMEETVPESILKSGF--SSCKRSKKTKDES 174

[Close]

BLAST of Tan0013638 vs. ExPASy TrEMBL
Match: A0A6J1H964 (methyl-CpG-binding domain-containing protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461200 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 1   MAAARPPK-TPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAE 60
           MAA +PPK TP KAPGLPVGLYAAQCEECFKWRLIS+QEEYEDIRS+LIEEPFTCHRK +
Sbjct: 1   MAAVKPPKTTPAKAPGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTD 60

Query: 61  TSCEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSST 120
           TSCEDPPDIDYDTTRTWVIDKPN+PKTP+GFKRRLVLRRNFSKLDAYYVTP GKTVRSST
Sbjct: 61  TSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSST 120

Query: 121 EMLAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           +MLAFVEANPQYKDIPLS+FSFAVPKVMEETVPESIL+     SS KR KKTKDES
Sbjct: 121 KMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILKSCF--SSCKRSKKTKDES 174

[Close]

BLAST of Tan0013638 vs. ExPASy TrEMBL
Match: A0A0A0K900 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391290 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 152/174 (87.36%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 2   AAARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETS 61
           AA RPPKTP K+  LPVGL+AAQCEECFKWRLISTQEEYE IRSK+IEEPFTC RK +TS
Sbjct: 4   AADRPPKTPTKSTRLPVGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQRKTDTS 63

Query: 62  CEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEM 121
           CEDPPDIDYDTTRTW IDKPNIPKTPEGF RRLVLR+NF+K DAYYVTP GKTVRSSTE+
Sbjct: 64  CEDPPDIDYDTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSSTEV 123

Query: 122 LAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           LAFVEANPQYKDI LSNFSFAVPK+MEETVPESIL+EGLNSSSAKRIKKTK+ES
Sbjct: 124 LAFVEANPQYKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNES 177

[Close]

BLAST of Tan0013638 vs. ExPASy TrEMBL
Match: A0A5A7UVI7 (Methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002230 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 148/174 (85.06%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 2   AAARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETS 61
           AAARPPKTP+K+  +PVGL+AAQCEECFKWRLISTQEEYEDIRS++IEEPFTC R+ +TS
Sbjct: 3   AAARPPKTPIKSTRVPVGLFAAQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRRTDTS 62

Query: 62  CEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEM 121
           CEDPPDI+YDTTRTW IDKPNIPKTPEGF RRLVLR+NF+K DAYYVTP GKTVRS TE+
Sbjct: 63  CEDPPDINYDTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEI 122

Query: 122 LAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           LAFV+ANPQYKDI LSNFSFAVPK+MEETVPESIL+EGLNSSSAKRIKKTK+ES
Sbjct: 123 LAFVQANPQYKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNES 176

[Close]

BLAST of Tan0013638 vs. ExPASy TrEMBL
Match: A0A1S3BRE2 (methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103492710 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.5e-80
Identity = 147/174 (84.48%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 2   AAARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETS 61
           AAARPPKTP+K+  +PV L+A QCEECFKWRLISTQEEYEDIRS++IEEPFTC RK +TS
Sbjct: 3   AAARPPKTPIKSTRVPVSLFAVQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRKTDTS 62

Query: 62  CEDPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEM 121
           CEDPPDI+YDTTRTW IDKPNIPKTPEGF RRLVLR+NF+K DAYYVTP GKTVRS TE+
Sbjct: 63  CEDPPDINYDTTRTWGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEI 122

Query: 122 LAFVEANPQYKDIPLSNFSFAVPKVMEETVPESILREGLNSSSAKRIKKTKDES 176
           LAFV+ANPQYKDI LSNFSFAVPK+MEETVPESIL+EGLNSSSAKRIKKTK+ES
Sbjct: 123 LAFVQANPQYKDIALSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNES 176

[Close]

BLAST of Tan0013638 vs. TAIR 10
Match: AT3G63030.1 (methyl-CPG-binding domain 4 )

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-53
Identity = 91/149 (61.07%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 4   ARPPKTPMKAPGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETSCE 63
           A+P      APG  +  YAAQC+ C KWR+I +QEEYEDIRSK++E+PF C +K   SCE
Sbjct: 11  AKPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCE 70

Query: 64  DPPDIDYDTTRTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEMLA 123
           +P DIDYD++RTWVIDKP +PKTP+GFKR LVLR+++SK+D YY TP GK +RS  E+ A
Sbjct: 71  EPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAA 130

Query: 124 FVEANPQYKDIPLSNFSFAVPKVMEETVP 153
           FVEANP++++ PL +F+F VPKVME+TVP
Sbjct: 131 FVEANPEFRNAPLGDFNFTVPKVMEDTVP 159

[Close]

BLAST of Tan0013638 vs. TAIR 10
Match: AT4G22745.1 (methyl-CPG-binding domain 1 )

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 14  PGLPVGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHRKAETSCEDPPDIDYDTT 73
           PG  + ++A QCE+C KWR I TQ+EYEDIRS++ E+PF C  K   SCED  D++YD++
Sbjct: 48  PGRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSS 107

Query: 74  RTWVIDKPNIPKTPEGFKRRLVLRRNFSKLDAYYVTPIGKTVRSSTEMLAFVEANPQYKD 133
           RTWVIDKP +P+TP GFKR L+LR+++SK+DAYY+TP GK ++S  E+ AF++AN  YK 
Sbjct: 108 RTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKY 167

Query: 134 IPLSNFSFAVPKVMEETVPESILREGLNSSSAK 167
             L +F+F VPKVMEETVP  IL +     S K
Sbjct: 168 ALLGDFNFTVPKVMEETVPSGILSDRTPKPSRK 200

[Close]

BLAST of Tan0013638 vs. TAIR 10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 118.6 bits (296), Expect = 5.4e-27
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 18  VGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHR----KAETSCEDPPDIDYDTT 77
           +G +  QC  CFKWRL+ + ++YE+IR +L+E PF C      K + SC+ P DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 78  RTWVIDKPNIPKTPEGFKRRLVLRRNFSK--LDAYYVTPIGKTVRSSTEMLAFVEANPQY 137
           R W IDKPNI + P G++R L +R        D YYV P GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 138 --KDIPLSNFSFAVPKVMEE 150
             + + LS FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of Tan0013638 vs. TAIR 10
Match: AT5G35330.2 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 118.6 bits (296), Expect = 5.4e-27
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 18  VGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHR----KAETSCEDPPDIDYDTT 77
           +G +  QC  CFKWRL+ + ++YE+IR +L+E PF C      K + SC+ P DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 78  RTWVIDKPNIPKTPEGFKRRLVLRRNFSK--LDAYYVTPIGKTVRSSTEMLAFVEANPQY 137
           R W IDKPNI + P G++R L +R        D YYV P GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 138 --KDIPLSNFSFAVPKVMEE 150
             + + LS FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of Tan0013638 vs. TAIR 10
Match: AT5G35330.3 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 118.6 bits (296), Expect = 5.4e-27
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 18  VGLYAAQCEECFKWRLISTQEEYEDIRSKLIEEPFTCHR----KAETSCEDPPDIDYDTT 77
           +G +  QC  CFKWRL+ + ++YE+IR +L+E PF C      K + SC+ P DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 78  RTWVIDKPNIPKTPEGFKRRLVLRRNFSK--LDAYYVTPIGKTVRSSTEMLAFVEANPQY 137
           R W IDKPNI + P G++R L +R        D YYV P GK +RS+ E+  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 138 --KDIPLSNFSFAVPKVMEE 150
             + + LS FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

The following BLAST results are available for this feature:

BLAST of Tan0013638 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYB9	2.8e-52	61.07	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q5XEN5	2.7e-47	55.56	Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8LA53	7.6e-26	41.43	Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q4PSK1	2.3e-22	45.38	Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FZP6	1.0e-14	30.81	Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Tan0013638 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896997.1	3.8e-83	88.57	methyl-CpG-binding domain-containing protein 4-like [Benincasa hispida]	[more]
XP_023513509.1	5.5e-82	88.07	methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita pepo s...	[more]
XP_023004659.1	9.4e-82	88.07	methyl-CpG-binding domain-containing protein 4-like isoform X2 [Cucurbita maxima...	[more]
XP_022960475.1	3.6e-81	88.07	methyl-CpG-binding domain-containing protein 4-like isoform X2 [Cucurbita moscha...	[more]
XP_004148873.1	4.7e-81	87.36	methyl-CpG-binding domain-containing protein 4 [Cucumis sativus] >KGN44852.1 hyp...	[more]

BLAST of Tan0013638 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWY1	4.5e-82	88.07	methyl-CpG-binding domain-containing protein 4-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1H964	1.7e-81	88.07	methyl-CpG-binding domain-containing protein 4-like isoform X2 OS=Cucurbita mosc...	[more]
A0A0A0K900	2.3e-81	87.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391290 PE=4 SV=1	[more]
A0A5A7UVI7	1.5e-80	85.06	Methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BRE2	9.5e-80	84.48	methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Tan0013638 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63030.1	2.0e-53	61.07	methyl-CPG-binding domain 4	[more]
AT4G22745.1	1.9e-48	55.56	methyl-CPG-binding domain 1	[more]
AT5G35330.1	5.4e-27	41.43	methyl-CPG-binding domain protein 02	[more]
AT5G35330.2	5.4e-27	41.43	methyl-CPG-binding domain protein 02	[more]
AT5G35330.3	5.4e-27	41.43	methyl-CPG-binding domain protein 02	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 78..151 e-value: 1.9E-7 score: 40.7
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 85..147 e-value: 1.4E-11 score: 44.0
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 76..146 score: 13.556947
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 21..67 e-value: 5.0E-11 score: 42.4
IPR011124	Zinc finger, CW-type	PROSITE	PS51050	ZF_CW	coord: 15..70 score: 11.45893
None	No IPR available	GENE3D	3.30.40.100		coord: 21..69 e-value: 3.0E-5 score: 25.5
None	No IPR available	GENE3D	3.30.890.10		coord: 84..145 e-value: 6.0E-12 score: 47.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..191
None	No IPR available	PANTHER	PTHR12396	METHYL-CPG BINDING PROTEIN, MBD	coord: 17..173
None	No IPR available	PANTHER	PTHR12396:SF10	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 17..173
None	No IPR available	CDD	cd01396	MeCP2_MBD	coord: 80..152 e-value: 1.24956E-17 score: 71.6349
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 58..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013638.1	Tan0013638.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding