Tan0011435 (gene) Snake gourd v1

Overview


Name	Tan0011435
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	LOB domain-containing protein
Location	LG04: 7300669 .. 7302263 (+)
RNA-Seq Expression	Tan0011435
Synteny	Tan0011435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATGAGTTGCAATGGTTGTCGGATCCTTCGCAAAGGATGTAGCGATGATTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCCGCTGATTCTCAGGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCGAACATCTCCGCCCTGGTAATTCTCTCCCGCTCTGATATAATATAATTACAGTTTTACCCTTTTTTTTTCTTTCCTTTTGTAAGTTTCTTGCATTTTCATCTGCACTATTTATTAATTTATCATAATTCTTTACACCCGGAAATTATGTTTGTTTTTTTTATAATTTGTATGCATATTTTTTTATAATAATTTTCATCTTTATTGAATTTGAGTTTCTAGCTAAATTTTAAAATCAAAAACTATTTTTTTTAATTTAGTTTTTAAAAAATAAATAAGTAGTAGATAAGAAAATATAGAAATCCATTGAAAGAAATAGTATTAGTTTTAGGCTTTATTTTCAAAAATTAAAAATTAAAAACAAAATGGCTACCAAATCGATTTTTTTTAGATTGGTTGGTAACTTGACATATCATATCAAACCTCCCCATAACAAATTTCTTAAAATTTTTTTAGTTTAGTGGTGATTTTGAGTACATGATTTCAGACATGTTATGTGTTTTAGATCTCTATAATGATATTATCCTTTCAATTCCAGTGGTATTTTTACGTCAATTTTCAAGTTTGAAGAGTTAAAATAATTTTTTAAAAAATTTTAGAAGTATAATGGAAACCTTCCTCAAATTCAATAGTATTTGGTATAATTTAACCCGTTCTAATTTTCAATCTACAACTAAAAGAGGGGCAAAGCTTAATTCATTTTAAGATTTAAAAAATTATATAAAATAGTTAAATTAATTTTTTCTAACCTAATTTGCGTCTCAAATTCTCATAATTAAATAAAAAAAATAGAACACATTCTTTTGGAATATTTATGAGTAGGGACGCTAGCTGTTGATAATAAATGAACCGAATGAATTCAAAATGTTGGTATGTAAAATAATTTATTTTTATTTTTATCTTTTGAAATAAGGAAAAAAATCGTCGTTCTGTGTGTTTTAATTTAGCCATTTTCAAGTCGTTGTTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTCCATGGTTCCGTCGGATTACTCTGCTCCGGCGACTGGGAAAGGTGTCAGGCCGCCGTCGACGCCGTGTTGACCGGATCCATGAACGTCGAAACCGACGCGCCGCCATCAAACGCTCACCTCTCCCTCAAATACTGCGACATTCGCCATGTTTGTAACGACGCCAATTTGGCTGCTTCCGGCGAGCTTCACAAGGTCAAGGCTCGGAACCGGTTCAAGAAGCCTGATCACCGGACCAAACCCAAACCCGGACCGGCTCATGAATTGGGAAGTGGGTCTAATGTGGAGGAGTTAGAGGCAACGGGGCTGGAAATGGCTGAGGGTTTGATGATGAACCGGTGGAAACCGGCTCGAGTCTTGACAAATGGAAGCCGGTTTGAGGAGGCCGATGTTGAGCTGGAGCTGACTCTTAGTTCGGCTCAGTAG

mRNA sequence

ATGAGAATGAGTTGCAATGGTTGTCGGATCCTTCGCAAAGGATGTAGCGATGATTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCCGCTGATTCTCAGGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCGAACATCTCCGCCCTGCCATTTTCAAGTCGTTGTTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTCCATGGTTCCGTCGGATTACTCTGCTCCGGCGACTGGGAAAGGTGTCAGGCCGCCGTCGACGCCGTGTTGACCGGATCCATGAACGTCGAAACCGACGCGCCGCCATCAAACGCTCACCTCTCCCTCAAATACTGCGACATTCGCCATGTTTGTAACGACGCCAATTTGGCTGCTTCCGGCGAGCTTCACAAGGTCAAGGCTCGGAACCGGTTCAAGAAGCCTGATCACCGGACCAAACCCAAACCCGGACCGGCTCATGAATTGGGAAGTGGGTCTAATGTGGAGGAGTTAGAGGCAACGGGGCTGGAAATGGCTGAGGGTTTGATGATGAACCGGTGGAAACCGGCTCGAGTCTTGACAAATGGAAGCCGGTTTGAGGAGGCCGATGTTGAGCTGGAGCTGACTCTTAGTTCGGCTCAGTAG

Coding sequence (CDS)

ATGAGAATGAGTTGCAATGGTTGTCGGATCCTTCGCAAAGGATGTAGCGATGATTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCCGCTGATTCTCAGGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCGAACATCTCCGCCCTGCCATTTTCAAGTCGTTGTTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTCCATGGTTCCGTCGGATTACTCTGCTCCGGCGACTGGGAAAGGTGTCAGGCCGCCGTCGACGCCGTGTTGACCGGATCCATGAACGTCGAAACCGACGCGCCGCCATCAAACGCTCACCTCTCCCTCAAATACTGCGACATTCGCCATGTTTGTAACGACGCCAATTTGGCTGCTTCCGGCGAGCTTCACAAGGTCAAGGCTCGGAACCGGTTCAAGAAGCCTGATCACCGGACCAAACCCAAACCCGGACCGGCTCATGAATTGGGAAGTGGGTCTAATGTGGAGGAGTTAGAGGCAACGGGGCTGGAAATGGCTGAGGGTTTGATGATGAACCGGTGGAAACCGGCTCGAGTCTTGACAAATGGAAGCCGGTTTGAGGAGGCCGATGTTGAGCTGGAGCTGACTCTTAGTTCGGCTCAGTAG

Protein sequence

MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAHLSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELEATGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ

Homology

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BLAST of Tan0011435 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.6e-49
Identity = 101/167 (60.48%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MR+SCNGCR+LRKGC+ DC IRPCLQWI SADSQANAT+FLAKFYGRAGL NLI +  +H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIF+SLLYEACGR+VNPV GSVGL+ SG+W +CQAAVDAVL G     T  P ++A 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 LSL----KYCDIRHVCND--------ANLAASGELHKVKAR-NRFKK 155
             +    +  DIRHV  D         NLA     +K K +  RFK+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKR 167

[Close]

BLAST of Tan0011435 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 110/205 (53.66%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCR+LRKGCS++C IRPCLQWI SA+SQANAT+FLAKFYGRAGL NL+    +H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGS--------MNVET 120
           LRPAIF+SLLYEACGR+VNP++GSVGLL SG+W  CQAAV+AV+ GS          V  
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DAPPSNAHLSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSG 180
            APP N     K CDIRHV        S     VK R+R    + R          L   
Sbjct: 121 QAPPFNN----KLCDIRHV--------SSRDENVKRRSRGACKEERNVRSLSHESSLSHE 180

Query: 181 SNVEELEAT--------GLEMAEGL 190
           S V   E T        GLE+  GL
Sbjct: 181 SPVSSEETTTEEPKTWIGLELTLGL 193

[Close]

BLAST of Tan0011435 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.2e-48
Identity = 91/142 (64.08%), Postives = 108/142 (76.06%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCR+LRKGCS+DC IRPCL WI S ++QANAT+FLAKFYGRAGL NLI A   H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGS--MNVETDAPPSN 120
           LRP IF+SLL+EACGR+VNP++GSVGLL SG+W+ CQ AV+AV+ G     + TDA    
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 AHLSLKYCDIRHVCNDANLAAS 141
               LK  DIRH+  D N AA+
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAA 142

[Close]

BLAST of Tan0011435 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.5e-38
Identity = 67/104 (64.42%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI +AD+Q +AT+F+AKF+GRAGL + I+A  +  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTG 107
           PA+F+SLLYEACGR VNPV+G++G+L +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRG 104

[Close]

BLAST of Tan0011435 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-37
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI S ++Q +AT+F+AKF+GRAGL + I+A  E   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTG 107
           PA+F+SLLYEACGR VNPV+G+VGLL +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRG 104

[Close]

BLAST of Tan0011435 vs. NCBI nr
Match: XP_022945568.1 (LOB domain-containing protein 42-like [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 5.4e-97
Identity = 184/223 (82.51%), Postives = 192/223 (86.10%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPS DSQANATIFLAKFYGRAGLFNLITAAAEH
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIFKSLLYEACGRMVNPV+GSVGLLCSGDW++CQAAVDAVLTGSM VE DAP SN +
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHR--TKPKPGPAHELGSGSNVEEL 180
           LSLK CDIRHVCND NLA  GELHK K RNRFKKPDHR  +KPKPGP HELGSGSNVE +
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDHRAKSKPKPGPGHELGSGSNVEVI 180

Query: 181 EATGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
           E     MA+ LM NR KP  VL NG   EE DVELELTL+SAQ
Sbjct: 181 EID--RMADDLMTNRRKPGWVLRNGMWVEEEDVELELTLNSAQ 221

[Close]

BLAST of Tan0011435 vs. NCBI nr
Match: KAG6573961.1 (LOB domain-containing protein 42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360.9 bits (925), Expect = 7.7e-96
Identity = 182/221 (82.35%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLR 62
           MSCNGCRILRKGCS DCIIRPCLQWIPS DSQANATIFLAKFYGRAGLFNLITAAAEHLR
Sbjct: 1   MSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEHLR 60

Query: 63  PAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAHLS 122
           PAIFKSLLYEACGRMVNPV+GSVGLLCSGDW++CQAAVDAVLTGSM VE DAP SN +LS
Sbjct: 61  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTNLS 120

Query: 123 LKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHR--TKPKPGPAHELGSGSNVEELEA 182
           LK CDIRHVCND NLA  GELHK K RNRFKKPDHR  +KPKPGP HELGSGSNVE +E 
Sbjct: 121 LKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDHRDKSKPKPGPGHELGSGSNVEVIEI 180

Query: 183 TGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
               MA+ LM NR KP  VL NG   EE DVELELTL+SAQ
Sbjct: 181 D--RMADDLMTNRRKPGWVLRNGMWVEEEDVELELTLNSAQ 219

[Close]

BLAST of Tan0011435 vs. NCBI nr
Match: XP_023542000.1 (LOB domain-containing protein 42-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 1.0e-95
Identity = 181/221 (81.90%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPS DSQANATIFLAKFYGRAGLFNLITAAAEH
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIFKSLLYEACGRMVNPV+GSVGLLCSGDW++CQAAVDAVLTGSM VE DAP SN +
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELEA 180
           LSLK CDIRHVCND NLA  GELHK K RNRFKKPD+RTK KPGP +ELGSGSNVE +E 
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGNELGSGSNVEVIEI 180

Query: 181 TGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
               MA+ LM NR KP  VL NG   EE DV LELTL+SAQ
Sbjct: 181 D--RMADDLMTNRRKPGWVLRNGMWVEEEDVALELTLNSAQ 219

[Close]

BLAST of Tan0011435 vs. NCBI nr
Match: XP_022968330.1 (LOB domain-containing protein 42-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 1.7e-95
Identity = 181/221 (81.90%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPS DSQANATIFLAKFYGRAGLFNLITAAAEH
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIFKSLLYEACGRMVNPV+GSVGLLCSGDW++CQAAVDAVLTGSM VE DAP SN +
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELEA 180
           LSLK CDIRHVCND NLA  GELHK K RNRFKKPD+RTK KPGP  ELGSGSNVE +E 
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGRELGSGSNVEVIEI 180

Query: 181 TGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
               MA+ LM NR KP  VL NG   EE  VELELTL+SAQ
Sbjct: 181 D--RMADDLMTNRRKPGWVLRNGMWVEEEHVELELTLNSAQ 219

[Close]

BLAST of Tan0011435 vs. NCBI nr
Match: XP_004135401.1 (LOB domain-containing protein 40 [Cucumis sativus] >KGN52610.2 hypothetical protein Csa_008453 [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 3.4e-91
Identity = 175/223 (78.48%), Postives = 188/223 (84.30%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCRILRKGCSDDCIIRPCLQWIPS+DSQANATIFLAKFYGRAGLFNLITAAA+H
Sbjct: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSSDSQANATIFLAKFYGRAGLFNLITAAAQH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPS-NA 120
           LRPAIFKSLLYEACGRMVNPV+GSVGLLCSGDWERCQAAVDAVL GSMNVE D PPS N 
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDTPPSNNG 120

Query: 121 HLSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELE 180
           +LSLK CDIRHVCN+ NLAASG+L KVK R+RFKKPDHRTKPKPGP H+LG GS+ +E  
Sbjct: 121 NLSLKCCDIRHVCNEPNLAASGDLLKVKGRSRFKKPDHRTKPKPGPDHDLGIGSSFDE-- 180

Query: 181 ATGLEMAEGLMMNRWKPARVLTNGSRFEEA-DVELELTLSSAQ 222
                             R ++NGSRFE+A DVELELTL SAQ
Sbjct: 181 ----------------AGRDVSNGSRFEKADDVELELTLKSAQ 205

[Close]

BLAST of Tan0011435 vs. ExPASy TrEMBL
Match: A0A6J1G195 (LOB domain-containing protein 42-like OS=Cucurbita moschata OX=3662 GN=LOC111449763 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.6e-97
Identity = 184/223 (82.51%), Postives = 192/223 (86.10%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPS DSQANATIFLAKFYGRAGLFNLITAAAEH
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIFKSLLYEACGRMVNPV+GSVGLLCSGDW++CQAAVDAVLTGSM VE DAP SN +
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHR--TKPKPGPAHELGSGSNVEEL 180
           LSLK CDIRHVCND NLA  GELHK K RNRFKKPDHR  +KPKPGP HELGSGSNVE +
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDHRAKSKPKPGPGHELGSGSNVEVI 180

Query: 181 EATGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
           E     MA+ LM NR KP  VL NG   EE DVELELTL+SAQ
Sbjct: 181 EID--RMADDLMTNRRKPGWVLRNGMWVEEEDVELELTLNSAQ 221

[Close]

BLAST of Tan0011435 vs. ExPASy TrEMBL
Match: A0A6J1HWX5 (LOB domain-containing protein 42-like OS=Cucurbita maxima OX=3661 GN=LOC111467594 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.4e-96
Identity = 181/221 (81.90%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPS DSQANATIFLAKFYGRAGLFNLITAAAEH
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIFKSLLYEACGRMVNPV+GSVGLLCSGDW++CQAAVDAVLTGSM VE DAP SN +
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELEA 180
           LSLK CDIRHVCND NLA  GELHK K RNRFKKPD+RTK KPGP  ELGSGSNVE +E 
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGRELGSGSNVEVIEI 180

Query: 181 TGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
               MA+ LM NR KP  VL NG   EE  VELELTL+SAQ
Sbjct: 181 D--RMADDLMTNRRKPGWVLRNGMWVEEEHVELELTLNSAQ 219

[Close]

BLAST of Tan0011435 vs. ExPASy TrEMBL
Match: A0A0A0KUI0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609680 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90
Identity = 173/221 (78.28%), Postives = 186/221 (84.16%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLR 62
           MSCNGCRILRKGCSDDCIIRPCLQWIPS+DSQANATIFLAKFYGRAGLFNLITAAA+HLR
Sbjct: 1   MSCNGCRILRKGCSDDCIIRPCLQWIPSSDSQANATIFLAKFYGRAGLFNLITAAAQHLR 60

Query: 63  PAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPS-NAHL 122
           PAIFKSLLYEACGRMVNPV+GSVGLLCSGDWERCQAAVDAVL GSMNVE D PPS N +L
Sbjct: 61  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDTPPSNNGNL 120

Query: 123 SLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELEAT 182
           SLK CDIRHVCN+ NLAASG+L KVK R+RFKKPDHRTKPKPGP H+LG GS+ +E    
Sbjct: 121 SLKCCDIRHVCNEPNLAASGDLLKVKGRSRFKKPDHRTKPKPGPDHDLGIGSSFDE---- 180

Query: 183 GLEMAEGLMMNRWKPARVLTNGSRFEEA-DVELELTLSSAQ 222
                           R ++NGSRFE+A DVELELTL SAQ
Sbjct: 181 --------------AGRDVSNGSRFEKADDVELELTLKSAQ 203

[Close]

BLAST of Tan0011435 vs. ExPASy TrEMBL
Match: A0A5A7SXG6 (LOB domain-containing protein 40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005720 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.9e-88
Identity = 173/232 (74.57%), Postives = 184/232 (79.31%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           M+MSCNGCRILRKGCSDDCIIRPCLQWIPS+DSQANATIFLAKFYGRAGLFNLITAAA H
Sbjct: 1   MKMSCNGCRILRKGCSDDCIIRPCLQWIPSSDSQANATIFLAKFYGRAGLFNLITAAAHH 60

Query: 61  LRP----------AIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNV 120
           LRP          AIFKSLLYEACGRMVNPV+GSVGLLCSGDWERCQAAVDAVL GSMNV
Sbjct: 61  LRPVKLSSCCVFLAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNV 120

Query: 121 ETDAPPS-NAHLSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHEL 180
           E D PPS N + SLK CDIRHVCN+ NLAASG+L KVK R+RFKKPDHRTK KPGP HEL
Sbjct: 121 EPDTPPSNNGNFSLKCCDIRHVCNEPNLAASGDLLKVKGRSRFKKPDHRTKSKPGPDHEL 180

Query: 181 GSGSNVEELEATGLEMAEGLMMNRWKPARVLTNGSRFEEADVELELTLSSAQ 222
           G GS+ +E                    R L +GSRFE+ADVELELTL SAQ
Sbjct: 181 GIGSSSDE------------------SGRDLRSGSRFEKADVELELTLKSAQ 214

[Close]

BLAST of Tan0011435 vs. ExPASy TrEMBL
Match: A0A6J1DAV9 (uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018633 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.8e-82
Identity = 161/209 (77.03%), Postives = 178/209 (85.17%), Query Frame = 0


Query: 15  CSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLRPAIFKSLLYEAC 74
           CSD+C+IRPCL+WI S DSQANATIFLAKFYGRAGLFNLITAA++HLRPAIFKSLLYEAC
Sbjct: 86  CSDECVIRPCLEWISSPDSQANATIFLAKFYGRAGLFNLITAASQHLRPAIFKSLLYEAC 145

Query: 75  GRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAHLSLKYCDIRHVCND 134
           GRMVNPV+GSVGLLCSGDW+RCQAAVDAVLTG+MNVET+APPSNA++    CDIRHVC D
Sbjct: 146 GRMVNPVYGSVGLLCSGDWDRCQAAVDAVLTGTMNVETNAPPSNANVLC--CDIRHVCTD 205

Query: 135 ANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSGSNVEELEAT-GLEMAEGLMMNR 194
            NLAA GE  KVKAR+RFKKPDHRTKPK GPA  LGSGSN  E  A   +EM + L +NR
Sbjct: 206 TNLAAPGEPRKVKARSRFKKPDHRTKPKSGPAEILGSGSNWAESGANRQIEMVDALTVNR 265

Query: 195 WKPARVLTNGSRFEEAD-VELELTLSSAQ 222
            KP RVL +GSR E  D VELELTL+SAQ
Sbjct: 266 GKPNRVLRHGSRSERVDNVELELTLNSAQ 292

[Close]

BLAST of Tan0011435 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-50
Identity = 101/167 (60.48%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MR+SCNGCR+LRKGC+ DC IRPCLQWI SADSQANAT+FLAKFYGRAGL NLI +  +H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGSMNVETDAPPSNAH 120
           LRPAIF+SLLYEACGR+VNPV GSVGL+ SG+W +CQAAVDAVL G     T  P ++A 
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 LSL----KYCDIRHVCND--------ANLAASGELHKVKAR-NRFKK 155
             +    +  DIRHV  D         NLA     +K K +  RFK+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKR 167

[Close]

BLAST of Tan0011435 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 194.5 bits (493), Expect = 8.9e-50
Identity = 110/205 (53.66%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCR+LRKGCS++C IRPCLQWI SA+SQANAT+FLAKFYGRAGL NL+    +H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGS--------MNVET 120
           LRPAIF+SLLYEACGR+VNP++GSVGLL SG+W  CQAAV+AV+ GS          V  
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DAPPSNAHLSLKYCDIRHVCNDANLAASGELHKVKARNRFKKPDHRTKPKPGPAHELGSG 180
            APP N     K CDIRHV        S     VK R+R    + R          L   
Sbjct: 121 QAPPFNN----KLCDIRHV--------SSRDENVKRRSRGACKEERNVRSLSHESSLSHE 180

Query: 181 SNVEELEAT--------GLEMAEGL 190
           S V   E T        GLE+  GL
Sbjct: 181 SPVSSEETTTEEPKTWIGLELTLGL 193

[Close]

BLAST of Tan0011435 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 191.8 bits (486), Expect = 5.8e-49
Identity = 91/142 (64.08%), Postives = 108/142 (76.06%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEH 60
           MRMSCNGCR+LRKGCS+DC IRPCL WI S ++QANAT+FLAKFYGRAGL NLI A   H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTGS--MNVETDAPPSN 120
           LRP IF+SLL+EACGR+VNP++GSVGLL SG+W+ CQ AV+AV+ G     + TDA    
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 AHLSLKYCDIRHVCNDANLAAS 141
               LK  DIRH+  D N AA+
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAA 142

[Close]

BLAST of Tan0011435 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-39
Identity = 67/104 (64.42%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI +AD+Q +AT+F+AKF+GRAGL + I+A  +  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTG 107
           PA+F+SLLYEACGR VNPV+G++G+L +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRG 104

[Close]

BLAST of Tan0011435 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-38
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSADSQANATIFLAKFYGRAGLFNLITAAAEHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI S ++Q +AT+F+AKF+GRAGL + I+A  E   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLYEACGRMVNPVHGSVGLLCSGDWERCQAAVDAVLTG 107
           PA+F+SLLYEACGR VNPV+G+VGLL +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRG 104

The following BLAST results are available for this feature:

BLAST of Tan0011435 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA30	5.6e-49	60.48	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]
Q9ZW96	1.3e-48	53.66	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9M886	8.2e-48	64.08	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]
Q9FN11	4.5e-38	64.42	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]
Q9SN23	3.8e-37	65.38	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]

BLAST of Tan0011435 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945568.1	5.4e-97	82.51	LOB domain-containing protein 42-like [Cucurbita moschata]	[more]
KAG6573961.1	7.7e-96	82.35	LOB domain-containing protein 42, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023542000.1	1.0e-95	81.90	LOB domain-containing protein 42-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968330.1	1.7e-95	81.90	LOB domain-containing protein 42-like [Cucurbita maxima]	[more]
XP_004135401.1	3.4e-91	78.48	LOB domain-containing protein 40 [Cucumis sativus] >KGN52610.2 hypothetical prot...	[more]

BLAST of Tan0011435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G195	2.6e-97	82.51	LOB domain-containing protein 42-like OS=Cucurbita moschata OX=3662 GN=LOC111449...	[more]
A0A6J1HWX5	8.4e-96	81.90	LOB domain-containing protein 42-like OS=Cucurbita maxima OX=3661 GN=LOC11146759...	[more]
A0A0A0KUI0	2.4e-90	78.28	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609680 PE=3 SV...	[more]
A0A5A7SXG6	2.9e-88	74.57	LOB domain-containing protein 40-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1DAV9	1.8e-82	77.03	uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Tan0011435 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68510.1	4.0e-50	60.48	LOB domain-containing protein 42	[more]
AT1G67100.1	8.9e-50	53.66	LOB domain-containing protein 40	[more]
AT3G02550.1	5.8e-49	64.08	LOB domain-containing protein 41	[more]
AT5G67420.1	3.2e-39	64.42	LOB domain-containing protein 37	[more]
AT3G49940.1	2.7e-38	65.38	LOB domain-containing protein 38	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 4..103 e-value: 1.3E-22 score: 80.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..109 score: 15.897276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..174
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..166
None	No IPR available	PANTHER	PTHR31304:SF48	LOB DOMAIN-CONTAINING PROTEIN 41-LIKE	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011435.1	Tan0011435.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0016021	integral component of membrane