Tan0010843 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGCCATAGAATTTTCTCAGTTTTTCTCCTTTCATGCTTTCTCCTTCTCTTTCTCTCTCCTGGTACTCCAATTCTTTCTTATCTAATTTCTTTTCTCTCTTTTTCTTTTTTATTTTCATACCCTCAATTATCTGTTTTGTTGGCTTTTTTTTTTCTTTAAGGATTTGGAGCTGAAGTGATGGTAACTGTGGAACATGGACCTTCTCTTACTCCAAAAAAGGTAATTTAGTACTTTTGATTATCTCTCCAATTGGTCGAAGAAGAAATGTGTGTATATATATGACTTTGACCGTATTTTATTGTATTAATATGTATATTTTGTGTTTTTTTGTTCGATAGGAAAGTGTAGGAAAATCAAAAAATACGATGGTTGATGCGTCGGATTATCGCGATCCAGGACCAAATCGCCCTGTAATGGCTAGGAATCATAGGGTCCCTATTCCTCCTACAAATGCTTAA ATGGGTAGCCATAGAATTTTCTCAGTTTTTCTCCTTTCATGCTTTCTCCTTCTCTTTCTCTCTCCTGGATTTGGAGCTGAAGTGATGGTAACTGTGGAACATGGACCTTCTCTTACTCCAAAAAAGGAAAGTGTAGGAAAATCAAAAAATACGATGGTTGATGCGTCGGATTATCGCGATCCAGGACCAAATCGCCCTGTAATGGCTAGGAATCATAGGGTCCCTATTCCTCCTACAAATGCTTAA ATGGGTAGCCATAGAATTTTCTCAGTTTTTCTCCTTTCATGCTTTCTCCTTCTCTTTCTCTCTCCTGGATTTGGAGCTGAAGTGATGGTAACTGTGGAACATGGACCTTCTCTTACTCCAAAAAAGGAAAGTGTAGGAAAATCAAAAAATACGATGGTTGATGCGTCGGATTATCGCGATCCAGGACCAAATCGCCCTGTAATGGCTAGGAATCATAGGGTCCCTATTCCTCCTACAAATGCTTAA MGSHRIFSVFLLSCFLLLFLSPGFGAEVMVTVEHGPSLTPKKESVGKSKNTMVDASDYRDPGPNRPVMARNHRVPIPPTNA Homology
BLAST of Tan0010843 vs. NCBI nr
Match: XP_031741770.1 (probable calcium-binding protein CML47 [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 7.7e-09 Identity = 42/84 (50.00%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Tan0010843 vs. NCBI nr
Match: KGN52469.1 (hypothetical protein Csa_008670 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08 Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of Tan0010843 vs. NCBI nr
Match: XP_022133550.1 (apidaecins type 73-like isoform X2 [Momordica charantia]) HSP 1 Score: 64.3 bits (155), Expect = 5.5e-07 Identity = 40/109 (36.70%), Postives = 51/109 (46.79%), Query Frame = 0
BLAST of Tan0010843 vs. NCBI nr
Match: XP_022133549.1 (apidaecins type 14-like isoform X1 [Momordica charantia]) HSP 1 Score: 60.8 bits (146), Expect = 6.1e-06 Identity = 40/110 (36.36%), Postives = 52/110 (47.27%), Query Frame = 0
BLAST of Tan0010843 vs. NCBI nr
Match: XP_022134005.1 (extensin-like isoform X1 [Momordica charantia]) HSP 1 Score: 57.4 bits (137), Expect = 6.7e-05 Identity = 39/93 (41.94%), Postives = 45/93 (48.39%), Query Frame = 0
BLAST of Tan0010843 vs. ExPASy TrEMBL
Match: A0A0A0KU89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636610 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.3e-09 Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of Tan0010843 vs. ExPASy TrEMBL
Match: A0A6J1BVK3 (apidaecins type 73-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07 Identity = 40/109 (36.70%), Postives = 51/109 (46.79%), Query Frame = 0
BLAST of Tan0010843 vs. ExPASy TrEMBL
Match: A0A6J1BWA5 (apidaecins type 14-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06 Identity = 40/110 (36.36%), Postives = 52/110 (47.27%), Query Frame = 0
BLAST of Tan0010843 vs. ExPASy TrEMBL
Match: A0A6J1BWU2 (extensin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006390 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.2e-05 Identity = 39/93 (41.94%), Postives = 45/93 (48.39%), Query Frame = 0
BLAST of Tan0010843 vs. ExPASy TrEMBL
Match: A0A5N6QY91 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007572 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.1e-04 Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|