Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGTATATATGTTTAATCCTCATCCTTGGAGAAAAGACTTATTCCCATGGCGGCATTGACCAATTTTAACTTTAACCTCAAACAGCAGGCACCATTAATCAACGCAAACGACAGTTCCCAAATTGGACGACACTGAAGGACCGAATTCGATTCCATTTTTTTGCCGCAGCGATCGAATCAGAAAGCCGTAACAATCCCATTGGAGAAGATAACTCCGCATCTTAATTCAAAATCTAATCTGCTCGCGCGCCGTCGATGGTGGCTCGCGATGAATCCTCAATATTTCTATATAAATTCCCCTTTCCTCCACTTACAAATACAATCAATTACAGAACGATGTCGTCGTACGGTCGAAAATCGAAGTCGAAGGCGGCGGCCGTTCCGTCGGAGAACGGCTACTCGGCGAAGGAACTGAGAGAGATCTTTAGCCAGATGGATACGAATGAAGACGGGGGATTGGGATTGATGGAGATCAAGGACGCATTGAAGCGACTGGACGCTGAATTACCGGTTCATCTTGCCTTCAAGGCGCTCTGCCACGCCGATCGAAACAGAGATGGAAAGCTTGGGGAGGATGAGATCGAAAAGTTCGTCAAGTATTTGATGAGCCAAGGTTATGTTGTGTGATTTAACTAATCCGACGAAGCCTCTTACTATTGCTTGTTCATCGTCGGTTTCTAAAAACTTATCCAATAAATGGCGGATGCGTCTTATATATTGTTCATCAAGTTATTACAGAGATTTGTATTGTATTGTATTGTATATATTGTTTCTTTTTAATGCCCATCTTTAACATCAGTTTTTTTTTTTTTTTTAGTGCTGGCACCTATAGGGTTGTAAATTTGTTTTTTTAAGGTTGAGAGAAATCTCCCACTCATGTATTTGTTGAATTAAAAAAAAATTATTTTGTCCTAAAAATTGAATATTGGATATTTTTGCTAATTCATTTTCAAAGATAAAAGGTTCTCAATTTTTTTTAATGGTTCACTTGAATTTAGCTCAAATAATTAGGCCTATATTCTCGATCCTAGATTAGAAATTTGAATCGCTATCCTAAATGTTGTTGAACTAAAACTATGTTTGAATGAAATTGTAATTC
mRNA sequence
GGTGTATATATGTTTAATCCTCATCCTTGGAGAAAAGACTTATTCCCATGGCGGCATTGACCAATTTTAACTTTAACCTCAAACAGCAGGCACCATTAATCAACGCAAACGACAGTTCCCAAATTGGACGACACTGAAGGACCGAATTCGATTCCATTTTTTTGCCGCAGCGATCGAATCAGAAAGCCGTAACAATCCCATTGGAGAAGATAACTCCGCATCTTAATTCAAAATCTAATCTGCTCGCGCGCCGTCGATGGTGGCTCGCGATGAATCCTCAATATTTCTATATAAATTCCCCTTTCCTCCACTTACAAATACAATCAATTACAGAACGATGTCGTCGTACGGTCGAAAATCGAAGTCGAAGGCGGCGGCCGTTCCGTCGGAGAACGGCTACTCGGCGAAGGAACTGAGAGAGATCTTTAGCCAGATGGATACGAATGAAGACGGGGGATTGGGATTGATGGAGATCAAGGACGCATTGAAGCGACTGGACGCTGAATTACCGGTTCATCTTGCCTTCAAGGCGCTCTGCCACGCCGATCGAAACAGAGATGGAAAGCTTGGGGAGGATGAGATCGAAAAGTTCGTCAAGTATTTGATGAGCCAAGGTTATGTTGTGTGATTTAACTAATCCGACGAAGCCTCTTACTATTGCTTGTTCATCGTCGGTTTCTAAAAACTTATCCAATAAATGGCGGATGCGTCTTATATATTGTTCATCAAGTTATTACAGAGATTTGTATTGTATTGTATTGTATATATTGTTTCTTTTTAATGCCCATCTTTAACATCAGTTTTTTTTTTTTTTTTAGTGCTGGCACCTATAGGGTTGTAAATTTGTTTTTTTAAGGTTGAGAGAAATCTCCCACTCATGTATTTGTTGAATTAAAAAAAAATTATTTTGTCCTAAAAATTGAATATTGGATATTTTTGCTAATTCATTTTCAAAGATAAAAGGTTCTCAATTTTTTTTAATGGTTCACTTGAATTTAGCTCAAATAATTAGGCCTATATTCTCGATCCTAGATTAGAAATTTGAATCGCTATCCTAAATGTTGTTGAACTAAAACTATGTTTGAATGAAATTGTAATTC
Coding sequence (CDS)
ATGGTGGCTCGCGATGAATCCTCAATATTTCTATATAAATTCCCCTTTCCTCCACTTACAAATACAATCAATTACAGAACGATGTCGTCGTACGGTCGAAAATCGAAGTCGAAGGCGGCGGCCGTTCCGTCGGAGAACGGCTACTCGGCGAAGGAACTGAGAGAGATCTTTAGCCAGATGGATACGAATGAAGACGGGGGATTGGGATTGATGGAGATCAAGGACGCATTGAAGCGACTGGACGCTGAATTACCGGTTCATCTTGCCTTCAAGGCGCTCTGCCACGCCGATCGAAACAGAGATGGAAAGCTTGGGGAGGATGAGATCGAAAAGTTCGTCAAGTATTTGATGAGCCAAGGTTATGTTGTGTGA
Protein sequence
MVARDESSIFLYKFPFPPLTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
Homology
BLAST of Tan0010525 vs. ExPASy Swiss-Prot
Match:
Q32NH8 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 OS=Xenopus laevis OX=8355 GN=plcd4 PE=2 SV=1)
HSP 1 Score: 44.7 bits (104), Expect = 9.0e-04
Identity = 21/67 (31.34%), Postives = 36/67 (53.73%), Query Frame = 0
Query: 57 FSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYL 116
F + D N+DG + E++D LK ++ ++ H AF+ AD++ G L +E F K L
Sbjct: 143 FQKADKNKDGRMNFKEVQDLLKMMNVDMSEHHAFRLFQMADKSESGTLEGEEFVLFYKAL 202
Query: 117 MSQGYVV 124
+ V+
Sbjct: 203 TQRDEVL 209
BLAST of Tan0010525 vs. NCBI nr
Match:
KAG6608479.1 (hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38
Identity = 82/105 (78.10%), Postives = 94/105 (89.52%), Query Frame = 0
Query: 19 LTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALK 78
+ N ++Y+TMSSYGR KSKA A SE+GYSAKELREIF+QMDTNEDGGLGL EIK+ALK
Sbjct: 32 IRNPVDYKTMSSYGR--KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALK 91
Query: 79 RLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
+LDAE PVHLAFKALC +DRNRDGKLG DEI+KF+KYLMS+GYVV
Sbjct: 92 QLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV 134
BLAST of Tan0010525 vs. NCBI nr
Match:
KAG7037807.1 (hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 168.3 bits (425), Expect = 4.1e-38
Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 0
Query: 21 NTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRL 80
N ++Y+TMSSYGR KSKA A SE+GYSAKELREIF+QMDTNEDGGLGL EIK+ALK+L
Sbjct: 34 NPVDYKTMSSYGR--KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQL 93
Query: 81 DAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
DAE PVHLAFKALC +DRNRDGKLG DEI+KF+KYLMS+GYVV
Sbjct: 94 DAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV 134
BLAST of Tan0010525 vs. NCBI nr
Match:
KGN55187.1 (hypothetical protein Csa_012728 [Cucumis sativus])
HSP 1 Score: 147.9 bits (372), Expect = 5.7e-32
Identity = 70/95 (73.68%), Postives = 85/95 (89.47%), Query Frame = 0
Query: 29 SSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHL 88
S + K+KS + V SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHL
Sbjct: 3 SMFRPKTKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHL 62
Query: 89 AFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
A+ ALCHADRNRDGKLGE+EI++FVKY+MS+GYVV
Sbjct: 63 AYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV 97
BLAST of Tan0010525 vs. NCBI nr
Match:
KAA0064378.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa] >TYK20209.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa])
HSP 1 Score: 144.8 bits (364), Expect = 4.9e-31
Identity = 68/88 (77.27%), Postives = 82/88 (93.18%), Query Frame = 0
Query: 36 KSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCH 95
KS + AV SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHLA+ ALC+
Sbjct: 2 KSNSRAVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCY 61
Query: 96 ADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
ADRNRDGKLGE+EI++FVKY+MS+GYVV
Sbjct: 62 ADRNRDGKLGEEEIDQFVKYMMSKGYVV 89
BLAST of Tan0010525 vs. NCBI nr
Match:
KAG7024250.1 (hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27
Identity = 61/80 (76.25%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 44 SENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGK 103
S++ YS KEL+EIF QMDTNEDGGLGL EIK+ALK+LDAE P+HLA+KALCHADRN DGK
Sbjct: 10 SKSAYSTKELKEIFHQMDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGK 69
Query: 104 LGEDEIEKFVKYLMSQGYVV 124
LGE+EI++FVKY++S+GYVV
Sbjct: 70 LGEEEIDEFVKYMLSEGYVV 89
BLAST of Tan0010525 vs. ExPASy TrEMBL
Match:
A0A0A0L3J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32
Identity = 70/95 (73.68%), Postives = 85/95 (89.47%), Query Frame = 0
Query: 29 SSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHL 88
S + K+KS + V SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHL
Sbjct: 3 SMFRPKTKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHL 62
Query: 89 AFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
A+ ALCHADRNRDGKLGE+EI++FVKY+MS+GYVV
Sbjct: 63 AYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV 97
BLAST of Tan0010525 vs. ExPASy TrEMBL
Match:
A0A5D3D9N2 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003460 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31
Identity = 68/88 (77.27%), Postives = 82/88 (93.18%), Query Frame = 0
Query: 36 KSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCH 95
KS + AV SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHLA+ ALC+
Sbjct: 2 KSNSRAVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCY 61
Query: 96 ADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
ADRNRDGKLGE+EI++FVKY+MS+GYVV
Sbjct: 62 ADRNRDGKLGEEEIDQFVKYMMSKGYVV 89
BLAST of Tan0010525 vs. ExPASy TrEMBL
Match:
A0A061FBR4 (Calcium-binding EF-hand family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_033849 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 52 ELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEK 111
++R IF++ D N+DG L E+KDA L + +P A+ AL HAD N DG + EDE EK
Sbjct: 46 QVRGIFNRFDANKDGRLSKQELKDAFASLGSRMPGFRAWLALQHADANGDGYISEDEFEK 105
Query: 112 FVKYLMSQGYV 123
VKY + +GY+
Sbjct: 106 LVKYTLKRGYI 116
BLAST of Tan0010525 vs. ExPASy TrEMBL
Match:
A0A6A1UYX3 (Putative calcium-binding protein CML10 OS=Morella rubra OX=262757 GN=CJ030_MR0G017070 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09
Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 0
Query: 17 PPLTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDA 76
P +TI + ++ K + VP Y+ ++LR +F + DTN DG L E+++A
Sbjct: 2 PAQLHTIRQKNVAYGCSKGMDQYKTVPLP--YTGEQLRGMFKRFDTNGDGQLSRQELRNA 61
Query: 77 LKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
+ L + P AF+AL HADRN DG++ E E++ V Y + GY V
Sbjct: 62 FRSLGSAAPGWRAFRALGHADRNGDGQISEAELDNLVGYALKHGYTV 106
BLAST of Tan0010525 vs. ExPASy TrEMBL
Match:
A0A5N6RQD5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018542 PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 5.6e-09
Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0
Query: 22 TINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLD 81
TI + +++ K+K K +P Y+ +L +F + D N DG L E+++A L
Sbjct: 6 TICQKNVANGCHKAKIKTVPMP----YTEAQLMGMFRRFDANGDGHLSRQELRNAFSTLG 65
Query: 82 AELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV 124
+ P AF+ALCHAD+N DG + E E++ V+Y + GY +
Sbjct: 66 SSAPGWRAFRALCHADKNGDGYISEAELDNLVRYALKHGYTI 103
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q32NH8 | 9.0e-04 | 31.34 | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 OS=Xenopus lae... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG6608479.1 | 3.1e-38 | 78.10 | hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7037807.1 | 4.1e-38 | 79.61 | hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KGN55187.1 | 5.7e-32 | 73.68 | hypothetical protein Csa_012728 [Cucumis sativus] | [more] |
| KAA0064378.1 | 4.9e-31 | 77.27 | putative calcium-binding protein CML10 [Cucumis melo var. makuwa] >TYK20209.1 pu... | [more] |
| KAG7024250.1 | 1.1e-27 | 76.25 | hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L3J7 | 2.8e-32 | 73.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1 | [more] |
| A0A5D3D9N2 | 2.4e-31 | 77.27 | Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A061FBR4 | 2.5e-09 | 46.48 | Calcium-binding EF-hand family protein, putative OS=Theobroma cacao OX=3641 GN=T... | [more] |
| A0A6A1UYX3 | 4.3e-09 | 35.51 | Putative calcium-binding protein CML10 OS=Morella rubra OX=262757 GN=CJ030_MR0G0... | [more] |
| A0A5N6RQD5 | 5.6e-09 | 34.31 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018542 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
