Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATTTCTCATCATCATTTCACTCTCTCTCACAGCTTACCCCCCTTTTACTTATCTTCCTTCCCCTTCTTCCTTTTCACAATCCCATCATCATCCATGGCTCATAAAATCATCCCCTGTTTCACCGCCGGCGTTTAACCGGAGCATGGCGGAGCGGGGAAAAAAGAAGGCGGCGCCGGCGGGAATCGGAGTTCGGAAGCAAAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATTGAATCCTTATCACTGCCTCTCGTCTCTGCTTTTTCTCTCCATCTTTACCATTCTTTTAAACTCCTACGGCTTAAATTAATCGTTAATGGCCCTTCCTTGATTTTCCAGGTTCAGGAAATTGTGTTAACGGCTGATATTGGATGTGCTGAATGTCAGAAAAAACTAGCGAATATTCTGTCCAAAATGAATGGTGAGCTTCTTGGGGAATTTGATTTGATTCCATCTTTCAATTTCAATGGTGACGATTCTTCCCCCATCTGGGATTTTGATTCTGACCAAATCAGAACTTGAAATTTTGCCATTGATGTCCATGGGAAAAACATCCCCTGTTCATTTTCTAATTTTTTTGGGTAATGTAAACAAGTTTCTGAATAATAATTCTTGTTCTGGGTACAGATACAGAGTCTGTGGTGGTGAATTTGCTGGATAAAAAAGTGATCTTGACTCGAAGATTGCAGATTCCATCCACGTGCAACGATTCTCCAAGTAAAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCAGATAATGGTGAAGATATTGTAATATATAATGGAATATTTTCGGTCACGTTCGTAGATAAATAAATGAGCATATTGTTTGTTGTTTAGCTTCAAAGAAAAAGGTTTTAGAGACATTGCCTTTTTTTTTTTTCTTTATGAAAATATTTGAAGGAATATTAAATATTGCCTTTTGATTTTTGAATGCAACAAAATCGTCGTACTTTAAAAGATGATTTTTGTCCGAATTGAGCACAGTTTGAAGAGCTGTGTTTAGCTGGAAACATAAACATGGTTCTGGCGCAACGTAATTATGTGTTTAATGGATGAATTTGCTCTGTATTGGTCGGTGGTCTTGTTTTGATGTTCATGCGTCTGTCTCTTTGAAGGGCATTGAAAAGTATGTATACTTCATTGTCTGTTTGTGTCAATTTAGTTGTTGTATTTTTTTTTAAGTTTTATTGTAATAATTGTATTTTAGTTAAATATATACAATAGACTTTGTCATTTATGAATGTAA
mRNA sequence
CTATTTCTCATCATCATTTCACTCTCTCTCACAGCTTACCCCCCTTTTACTTATCTTCCTTCCCCTTCTTCCTTTTCACAATCCCATCATCATCCATGGCTCATAAAATCATCCCCTGTTTCACCGCCGGCGTTTAACCGGAGCATGGCGGAGCGGGGAAAAAAGAAGGCGGCGCCGGCGGGAATCGGAGTTCGGAAGCAAAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATTGAATCCTTATCACTGCCTCTCGTTCAGGAAATTGTGTTAACGGCTGATATTGGATGTGCTGAATGTCAGAAAAAACTAGCGAATATTCTGTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGCTGGATAAAAAAGTGATCTTGACTCGAAGATTGCAGATTCCATCCACGTGCAACGATTCTCCAAGTAAAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCAGATAATGGTGAAGATATTGTAATATATAATGGAATATTTTCGGTCACGTTCGTAGATAAATAAATGAGCATATTGTTTGTTGTTTAGCTTCAAAGAAAAAGGTTTTAGAGACATTGCCTTTTTTTTTTTTCTTTATGAAAATATTTGAAGGAATATTAAATATTGCCTTTTGATTTTTGAATGCAACAAAATCGTCGTACTTTAAAAGATGATTTTTGTCCGAATTGAGCACAGTTTGAAGAGCTGTGTTTAGCTGGAAACATAAACATGGTTCTGGCGCAACGTAATTATGTGTTTAATGGATGAATTTGCTCTGTATTGGTCGGTGGTCTTGTTTTGATGTTCATGCGTCTGTCTCTTTGAAGGGCATTGAAAAGTATGTATACTTCATTGTCTGTTTGTGTCAATTTAGTTGTTGTATTTTTTTTTAAGTTTTATTGTAATAATTGTATTTTAGTTAAATATATACAATAGACTTTGTCATTTATGAATGTAA
Coding sequence (CDS)
ATGGCGGAGCGGGGAAAAAAGAAGGCGGCGCCGGCGGGAATCGGAGTTCGGAAGCAAAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATTGAATCCTTATCACTGCCTCTCGTTCAGGAAATTGTGTTAACGGCTGATATTGGATGTGCTGAATGTCAGAAAAAACTAGCGAATATTCTGTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGCTGGATAAAAAAGTGATCTTGACTCGAAGATTGCAGATTCCATCCACGTGCAACGATTCTCCAAGTAAAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCAGATAA
Protein sequence
MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR
Homology
BLAST of Tan0007528 vs. NCBI nr
Match:
XP_022150612.1 (uncharacterized protein LOC111018707 [Momordica charantia])
HSP 1 Score: 171.0 bits (432), Expect = 5.7e-39
Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 0
Query: 1 MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANI 60
MAER KKKAA IGVRK +IFPHASSLASIESLSLPLVQEIVLTADI C ECQ KLANI
Sbjct: 1 MAERAKKKAAV--IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANI 60
Query: 61 LSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
LSK+NDTESVVVNLL+KKVILTRRLQ+PSTC++S SKV+TIKRLLGSSFR
Sbjct: 61 LSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 108
BLAST of Tan0007528 vs. NCBI nr
Match:
KAG7013033.1 (hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 165.2 bits (417), Expect = 3.1e-37
Identity = 93/110 (84.55%), Postives = 97/110 (88.18%), Query Frame = 0
Query: 1 MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANI 60
MAER K AA AGIGVRK KIFPHASSLASIESLSLPLVQEIV ADIGCAECQKKLANI
Sbjct: 1 MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANI 60
Query: 61 LSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
L+KMNDTESVVVNLLDKKVILTR+LQIP+ S+VSTIKRLLGSSFR
Sbjct: 61 LAKMNDTESVVVNLLDKKVILTRKLQIPT------SRVSTIKRLLGSSFR 104
BLAST of Tan0007528 vs. NCBI nr
Match:
XP_022968296.1 (uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima])
HSP 1 Score: 164.9 bits (416), Expect = 4.1e-37
Identity = 95/111 (85.59%), Postives = 98/111 (88.29%), Query Frame = 0
Query: 1 MAER-GKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLAN 60
MAER K AA AGIGVRK KIFPHASSLASIESLSLPLVQEIV TADIGCAECQKKLAN
Sbjct: 1 MAERPNKAAAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFTADIGCAECQKKLAN 60
Query: 61 ILSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
ILSKMNDTESVVVNLLDKKVILTR+LQIPS S+VST+KRLLGSSFR
Sbjct: 61 ILSKMNDTESVVVNLLDKKVILTRKLQIPS------SRVSTVKRLLGSSFR 105
BLAST of Tan0007528 vs. NCBI nr
Match:
KAG6573976.1 (hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 163.7 bits (413), Expect = 9.0e-37
Identity = 92/110 (83.64%), Postives = 96/110 (87.27%), Query Frame = 0
Query: 1 MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANI 60
MAER K AA AGIGVRK KIFPHASSLASIESLSLPLVQEIV ADIGCAECQKKLANI
Sbjct: 1 MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANI 60
Query: 61 LSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
L+KMNDTESVVVNLLDKKVILTR+LQIP+ S+ STIKRLLGSSFR
Sbjct: 61 LAKMNDTESVVVNLLDKKVILTRKLQIPT------SRASTIKRLLGSSFR 104
BLAST of Tan0007528 vs. NCBI nr
Match:
XP_023542320.1 (uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 161.0 bits (406), Expect = 5.9e-36
Identity = 93/111 (83.78%), Postives = 97/111 (87.39%), Query Frame = 0
Query: 1 MAER-GKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLAN 60
MAER K AA AGIGVRK KIFPHASSLASIESLSLPLVQEIV ADIGCAECQKKLAN
Sbjct: 1 MAERPNKAAAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLAN 60
Query: 61 ILSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
IL+KMNDTESVVVNLLDKKVILTR+LQIP+ S+VSTIKRLLGSSFR
Sbjct: 61 ILAKMNDTESVVVNLLDKKVILTRKLQIPT------SRVSTIKRLLGSSFR 105
BLAST of Tan0007528 vs. ExPASy TrEMBL
Match:
A0A6J1DB71 (uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018707 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 2.7e-39
Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 0
Query: 1 MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANI 60
MAER KKKAA IGVRK +IFPHASSLASIESLSLPLVQEIVLTADI C ECQ KLANI
Sbjct: 1 MAERAKKKAAV--IGVRKPRIFPHASSLASIESLSLPLVQEIVLTADIRCPECQNKLANI 60
Query: 61 LSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
LSK+NDTESVVVNLL+KKVILTRRLQ+PSTC++S SKV+TIKRLLGSSFR
Sbjct: 61 LSKINDTESVVVNLLEKKVILTRRLQVPSTCSNSSSKVATIKRLLGSSFR 108
BLAST of Tan0007528 vs. ExPASy TrEMBL
Match:
A0A6J1HUG9 (uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467567 PE=4 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37
Identity = 95/111 (85.59%), Postives = 98/111 (88.29%), Query Frame = 0
Query: 1 MAER-GKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLAN 60
MAER K AA AGIGVRK KIFPHASSLASIESLSLPLVQEIV TADIGCAECQKKLAN
Sbjct: 1 MAERPNKAAAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFTADIGCAECQKKLAN 60
Query: 61 ILSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
ILSKMNDTESVVVNLLDKKVILTR+LQIPS S+VST+KRLLGSSFR
Sbjct: 61 ILSKMNDTESVVVNLLDKKVILTRKLQIPS------SRVSTVKRLLGSSFR 105
BLAST of Tan0007528 vs. ExPASy TrEMBL
Match:
A0A6J1G188 (uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1)
HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 90/109 (82.57%), Postives = 95/109 (87.16%), Query Frame = 0
Query: 1 MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANI 60
MAER K AA AGIGVRK KIFPHASSLAS+ESLSLPLVQEIV ADIGCAECQKKLANI
Sbjct: 1 MAERPNKTAA-AGIGVRKLKIFPHASSLASVESLSLPLVQEIVFAADIGCAECQKKLANI 60
Query: 61 LSKMNDTESVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSF 110
L+KMNDTESVVVNLLDKKVILTR+LQI + S+VSTIKRLLGSSF
Sbjct: 61 LAKMNDTESVVVNLLDKKVILTRKLQIQT------SRVSTIKRLLGSSF 102
BLAST of Tan0007528 vs. ExPASy TrEMBL
Match:
A0A0A0KT62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 7.2e-32
Identity = 82/102 (80.39%), Postives = 87/102 (85.29%), Query Frame = 0
Query: 9 AAPAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIGCAECQKKLANILSKMNDTE 68
A GIGVRK++IFPHASSLASIESL+LPLVQEIVLTADIGCAECQKKLANILSKMNDTE
Sbjct: 3 AVVVGIGVRKKRIFPHASSLASIESLTLPLVQEIVLTADIGCAECQKKLANILSKMNDTE 62
Query: 69 SVVVNLLDKKVILTRRLQIPSTCNDSPSKVSTIKRLLGSSFR 111
SVVVNLLDKKVILTRR QI PS+VSTI+RL S R
Sbjct: 63 SVVVNLLDKKVILTRRSQI-------PSRVSTIRRLFASPCR 97
BLAST of Tan0007528 vs. ExPASy TrEMBL
Match:
A0A6J1G176 (uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30
Identity = 90/136 (66.18%), Postives = 95/136 (69.85%), Query Frame = 0
Query: 1 MAERGKKKAAPAGIGVRKQKIFPHASSLASIESLSLPL---------------------- 60
MAER K AA AGIGVRK KIFPHASSLAS+ESLSLPL
Sbjct: 1 MAERPNKTAA-AGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALW 60
Query: 61 -----VQEIVLTADIGCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSTCND 110
VQEIV ADIGCAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQI +
Sbjct: 61 SVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIQT---- 120
BLAST of Tan0007528 vs. TAIR 10
Match:
AT1G68585.1 (unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 73.9 bits (180), Expect = 8.8e-14
Identity = 43/86 (50.00%), Postives = 65/86 (75.58%), Query Frame = 0
Query: 26 SSLASIESLSLPLVQEIVLTADIGCAECQKKLANILSKMNDTESVVVNLLDKKVILT--- 85
+SLAS+ SLS+PL+QEIVL+ADI C++CQ+K+A+I+++M +T S++V++L+KKV LT
Sbjct: 26 TSLASVASLSMPLIQEIVLSADIRCSDCQEKVADIMARMIETYSILVSVLEKKVTLTCTY 85
Query: 86 ---RRLQIPSTCNDSPSKVSTIKRLL 106
RR+ S K+STIKRL+
Sbjct: 86 SGDRRVS-KSYGEALLCKISTIKRLI 110
BLAST of Tan0007528 vs. TAIR 10
Match:
AT2G35730.1 (Heavy metal transport/detoxification superfamily protein )
HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0
Query: 27 SLASIESLSLPLVQEIVLTADIGCAECQKKLANILSKMNDTESVVVNLLDKKV------- 86
+L E LSLP Q I + AD+GC CQ +++ I+SKM E VV+L K V
Sbjct: 10 TLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGDFR 69
Query: 87 --ILTRRLQIPSTCNDSPSKVSTIKRLL 106
+++ + Q+ + +PS+ KRLL
Sbjct: 70 PRLVSSQQQVKDVVSQTPSQ--NAKRLL 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022150612.1 | 5.7e-39 | 85.45 | uncharacterized protein LOC111018707 [Momordica charantia] | [more] |
| KAG7013033.1 | 3.1e-37 | 84.55 | hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022968296.1 | 4.1e-37 | 85.59 | uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima] | [more] |
| KAG6573976.1 | 9.0e-37 | 83.64 | hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023542320.1 | 5.9e-36 | 83.78 | uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DB71 | 2.7e-39 | 85.45 | uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
| A0A6J1HUG9 | 2.0e-37 | 85.59 | uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1G188 | 1.2e-34 | 82.57 | uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A0A0KT62 | 7.2e-32 | 80.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608570 PE=4 SV=1 | [more] |
| A0A6J1G176 | 3.0e-30 | 66.18 | uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G68585.1 | 8.8e-14 | 50.00 | unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bact... | [more] |
| AT2G35730.1 | 1.1e-05 | 35.23 | Heavy metal transport/detoxification superfamily protein | [more] |
