Tan0007003 (gene) Snake gourd v1

Overview


Name	Tan0007003
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	LOB domain-containing protein
Location	LG05: 79905354 .. 79908245 (+)
RNA-Seq Expression	Tan0007003
Synteny	Tan0007003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCATATTCATATTCATATTCATATTCATATTCATATTCATATTCATATTCATATTCCTTTGGTAAAAAGTTAGAGATGAAAGAAAATGGAATAATAAGAAAACAAGGAGGAGCAGCACCATGCGCAGCATGCAAGCTACTGAGAAGAAGGTGTGCAGAAGAGTGTGTATTTGCACCTTATTTCCCCGCTGAGGAACCTCATAAGTTCGCCAACGTTCATAAAGTCTTCGGCGCTAGCAATGTCAACAAAATGCTCCAGGTAACCATAATCCACTCATTTTCAATGTGGGATCCTCAACATGCCCCCTTAAGATATAATGGACTCTGATACCATATTAGATTATATGGGGTTCCATCTCAAAATCAATTGACAATGAAAGGAGTAGCTCATATATTTTTATATATTGTGAGGTTACTCTCCACTTTTCCAATGTGGGATTCTCAACATCCTTTTCTAAAATCCTATTTCTTTTCTCGTTATTTTTCTACTATGGTTTTCATTTTTTTTTTTTTTTGGTTACTCTTGGGCATGCTAGTATGAAAATGGATTAGGAATTTTGCAACAATCCTTGACCAAAACTGCACCCCCAACTTTGATCTCTGTGTTGGCTGCAGTTTTGAGAGATAGGATGACAAAAAGCTTCATTATGGAAAATTATCAATTTCTTTTTATATATATAACTGTCCCATAGTTTGAATATGGTGTCTACTTACACTTTAAAAAGCTTTCTCCAAGAAAACTTTAGATTATACAACTTTGTCTTTATTGTCAATACTATCATGAAAAATGTTGAAAACTTTTGGTTCACTCATTTCCACAGCCACGTGGCTTACACAAATAAATTTGTCACACATTAATGTTTTAGTGGTATATTAACAACTTAATTAAACTACATAAAAATATAATTCAAATCTTAGATTTGAATCATAAAACTCGTAGTCCTTAATATGTCAGTTGAATTAAGCTATATAAAATGATACAATGTTTAAAATAGAATGACAAATTTAAGAATCCCTTTTTTTAATTAACAAAATTTAAAGGAAAAAAAAACGGTGGCTCTGTCAACTTTAACGGTATAACCTTTCATTGTGACCGTTAATAATTAATAATATATTGCCTGTGGAAATTGAAAAATACAAAAAGTAGTATCTTTTCATTTAAGATAAGCATCAATTCCTCTCTCTCTCTTTTCTTCTCTTTTCTTCTCTTTTCTTTTCTTTTCTTTCTTTTTTTTTTTTAAGAAAAAAAAATCAAACAACTCTTTGAAAAAAAAAAGATTTATAGTTTAAATTTAGGTTAATGATGTAGTCTAAGAATTTAAGGAAATTACATAAATAGCCTAATATACAGGGATGATTATAAATCACACTCAATATTTAACTTCAAATATTATTTTAAAGACCTATTTGATTTACAAATTTACAGATGATACCATTCAATTAATTTAACAAAATTGATATATACATTGTCTAGAGGAACATGTGTTTGCAACATATGCAAATCACGTGAGGGTTATTTGTAATTATTCTAAATTTAAAAAATAAACTACAACTATAATAGCTTATAAAAAAAAAGTTACTAACATCTTCATATGTGTTAATTAGTTTGGTTAAAAAAATCTATAAAATCAACAAGTTTTGCATAAAGCTATTAAGGAGAAAATATAGTTAATGAATGAATTTGAGTCAACTTAGGTCACTATATATGAGAATAAAGGAGAGATTATAATTAATTAATTAATTAATTATCAATGCTAAAATTTTAATTAAAATAACTCTTATCACAAGCCTTTTGGATTTTACCTTTTAACCTTTTCCCTCAACTTGCCTTGTACTTCATGTGAAGTTTTTATTTATTTTTTTAAATTAATAAATGCCTTAATTATTATAAAAGAAAAAACATATTTAAGCTAAAAAAAGAAGGGAAAAAAATGTTTTTTTGTGGACTTTTTGGGTTAATTGTGAAGGCCCACCCACCCCCATTTGCTTGTTTTTGGAGAGACAACCAACAAATAAAAGCCAAATTAGAACTTACCATACCATCCTTTATTAACTAAATATTGCAGAATTTTCAAACTCTCAATTAGAATCCAATTGAACTCATTATATTATAATATTAACCACTAGATATTTTTATCTAAATTTTACTTTGATTGTTTTACCTTAAATTTGTTTACTTTATATCAATTCAAAGATACTGTTTTCTTCCTCTTGAATCTTATATAAAAATTATTTTAGTTTATTTTTAAGTATTTAAAGTTAGGAGTTTTGAAATAGTTTGAAATTCTCCTTATATGACAATGGTTAAAATAACTTTTTTATACCAATTTAAAAGGCAAAAACAAAATATTTGGAAATTAAATGAACTAAAATATAATATTTGAAACAAAATAAAGTTAGAGATCAAAATAAGAAGTAAAGATAAAACTTAACCATAGTTTTTTATCTTATTATAAGAAAATTCTAAAAAAAACAAATAATAAGCGATGTTATAAGTTACAAATCTAGCACCAAAATATTGACGACATAGACATGGCAGGAGTTGCCAATTCACCAACGAGGAGATGCAGTGAGCAGTTTGGTATATGAAGCAAACGCTCGAGTGCGCGACCCGGTCTACGGGTGTGTCGGGGCCATATCGTCGCTGCAGCAGCAGATAGACGCCCTCCAAACTCAGCTGGCTCTGGCTCAAGCCGAGGTGGTGCACCTGCGGGTACGTCAGACAGCATCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAACAGTGGATCACCCTCATCCAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGGGACTCAATGTGGTGATCAAAACAACTACTATTATTT

mRNA sequence

TATTCATATTCATATTCATATTCATATTCATATTCATATTCATATTCATATTCATATTCCTTTGGTAAAAAGTTAGAGATGAAAGAAAATGGAATAATAAGAAAACAAGGAGGAGCAGCACCATGCGCAGCATGCAAGCTACTGAGAAGAAGGTGTGCAGAAGAGTGTGTATTTGCACCTTATTTCCCCGCTGAGGAACCTCATAAGTTCGCCAACGTTCATAAAGTCTTCGGCGCTAGCAATGTCAACAAAATGCTCCAGGAGTTGCCAATTCACCAACGAGGAGATGCAGTGAGCAGTTTGGTATATGAAGCAAACGCTCGAGTGCGCGACCCGGTCTACGGGTGTGTCGGGGCCATATCGTCGCTGCAGCAGCAGATAGACGCCCTCCAAACTCAGCTGGCTCTGGCTCAAGCCGAGGTGGTGCACCTGCGGGTACGTCAGACAGCATCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAACAGTGGATCACCCTCATCCAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGGGACTCAATGTGGTGATCAAAACAACTACTATTATTT

Coding sequence (CDS)

ATGAAAGAAAATGGAATAATAAGAAAACAAGGAGGAGCAGCACCATGCGCAGCATGCAAGCTACTGAGAAGAAGGTGTGCAGAAGAGTGTGTATTTGCACCTTATTTCCCCGCTGAGGAACCTCATAAGTTCGCCAACGTTCATAAAGTCTTCGGCGCTAGCAATGTCAACAAAATGCTCCAGGAGTTGCCAATTCACCAACGAGGAGATGCAGTGAGCAGTTTGGTATATGAAGCAAACGCTCGAGTGCGCGACCCGGTCTACGGGTGTGTCGGGGCCATATCGTCGCTGCAGCAGCAGATAGACGCCCTCCAAACTCAGCTGGCTCTGGCTCAAGCCGAGGTGGTGCACCTGCGGGTACGTCAGACAGCATCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAACAGTGGATCACCCTCATCCAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGGGACTCAATGTGGTGA

Protein sequence

MKENGIIRKQGGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW

Homology

[Close]

BLAST of Tan0007003 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.0e-66
Identity = 130/172 (75.58%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MKENGIIRKQGGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKML 60
           MKE+   RKQG A+PCAACKLLRRRCA++CVF+PYFPA+EP KFANVH+VFGASNVNKML
Sbjct: 1   MKESS--RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQID LQ QLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMF-EMDMVVDQAMGDSMW 171
           RQ+ +F  +GL P SPS+SGSPSS+ +  Q ++ MF  MD+V + ++G+SMW
Sbjct: 121 RQSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Tan0007003 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 7.2e-44
Identity = 81/118 (68.64%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 12  GAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDA 71
           G++PCA+CKLLRRRCA++C+FAPYFP ++PHKFA VHKVFGASNV+KMLQELP+HQR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 72  VSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTASFSNY 130
           V+SLV+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++   +  ++
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Tan0007003 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.3e-40
Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 14  APCAACKLLRRRCAEE-CVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAV 73
           +PCA CKLLRR+C ++ CVFAPYFPA+EP+KFA VHK+FGASNVNKMLQEL  + R DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 74  SSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLR 120
            S+VYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of Tan0007003 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-37
Identity = 86/171 (50.29%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 15  PCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSS 74
           PCAACKLLRRRCA+EC F+PYF   EPHKFA+VHKVFGASNV+KML E+P  QR DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 75  LVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR------------Q 134
           LVYEAN R+RDPVYGC+GAIS+LQQQ+ ALQ +L   ++E++  + R            Q
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQ 164

Query: 135 TASFSNYG------LSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGD 168
            A F N G        P  P+    P++    S S  +F      D   G+
Sbjct: 165 VAGFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRDLEYGN 215

[Close]

BLAST of Tan0007003 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 14  APCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAVS 73
           +PCAACK LRR+C   C+FAPYFP EEPHKFANVHK+FGASNV K+L EL  HQR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 74  SLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSP 133
           SL YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++ H           YGLS 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH-----------YGLST 129

Query: 134 TSPSNSGSPSSRLMGSQSRP 154
           ++    G+    +   Q  P
Sbjct: 130 SAAGAPGNVVDLVFQPQPLP 138

[Close]

BLAST of Tan0007003 vs. NCBI nr
Match: XP_038895183.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 160/169 (94.67%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 3   ENGIIRKQ-GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQ 62
           ENG  RKQ GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNKMLQ
Sbjct: 4   ENG--RKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63

Query: 63  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122
           ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQID LQTQLALAQAEVVHLRVR
Sbjct: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDTLQTQLALAQAEVVHLRVR 123

Query: 123 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 171
           QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDM VDQA+GDSMW
Sbjct: 124 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMAVDQAIGDSMW 170

[Close]

BLAST of Tan0007003 vs. NCBI nr
Match: XP_022927419.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >XP_023000973.1 LOB domain-containing protein 4-like [Cucurbita maxima] >XP_023520045.1 LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo] >KAG7019437.1 LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MKENGIIRKQ--GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNK 60
           MK    +RKQ  GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMFEMDMVVDQAMGDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRLMGSQ SRPMFEMDMVVDQAMGDS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Tan0007003 vs. NCBI nr
Match: KAG6583812.1 (LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.8 bits (787), Expect = 6.0e-80
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MKENGIIRKQ--GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNK 60
           MK    +RKQ  GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQID LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDNLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMFEMDMVVDQAMGDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRLMGSQ SRPMFEMDMVVDQAMGDS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Tan0007003 vs. NCBI nr
Match: XP_004145462.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN66910.1 hypothetical protein Csa_006984 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 6.0e-80
Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 3   ENGIIRKQ-GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQ 62
           ENG  RKQ GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNKMLQ
Sbjct: 4   ENG--RKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63

Query: 63  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122
           ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHLRVR
Sbjct: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVR 123

Query: 123 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 171
           QTASFSNYGLSPTSPSNSGSPSSRLMGSQSR MFEMDMVVDQAM +SMW
Sbjct: 124 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRTMFEMDMVVDQAMEESMW 170

[Close]

BLAST of Tan0007003 vs. NCBI nr
Match: XP_008459081.1 (PREDICTED: LOB domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 6.6e-79
Identity = 157/169 (92.90%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 3   ENGIIRKQ-GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQ 62
           ENG  RKQ GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNKMLQ
Sbjct: 4   ENG--RKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63

Query: 63  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122
           ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHLRVR
Sbjct: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVR 123

Query: 123 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 171
           QTASFSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDMVVDQA+ DSMW
Sbjct: 124 QTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 170

[Close]

BLAST of Tan0007003 vs. ExPASy TrEMBL
Match: A0A6J1KP63 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495252 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MKENGIIRKQ--GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNK 60
           MK    +RKQ  GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMFEMDMVVDQAMGDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRLMGSQ SRPMFEMDMVVDQAMGDS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Tan0007003 vs. ExPASy TrEMBL
Match: A0A6J1EHY2 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434249 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MKENGIIRKQ--GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNK 60
           MK    +RKQ  GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMFEMDMVVDQAMGDSMW 171
           RVRQTASFSNYGLSPTSP NSGSPSSRLMGSQ SRPMFEMDMVVDQAMGDS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

[Close]

BLAST of Tan0007003 vs. ExPASy TrEMBL
Match: A0A0A0LYG0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G713680 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.9e-80
Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 3   ENGIIRKQ-GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQ 62
           ENG  RKQ GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNKMLQ
Sbjct: 4   ENG--RKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63

Query: 63  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122
           ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHLRVR
Sbjct: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVR 123

Query: 123 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 171
           QTASFSNYGLSPTSPSNSGSPSSRLMGSQSR MFEMDMVVDQAM +SMW
Sbjct: 124 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRTMFEMDMVVDQAMEESMW 170

[Close]

BLAST of Tan0007003 vs. ExPASy TrEMBL
Match: A0A1S3CAK2 (LOB domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498298 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 157/169 (92.90%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 3   ENGIIRKQ-GGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQ 62
           ENG  RKQ GGAAPCAACKLLRRRC EECVFAPYFPA++PHKFANVHKVFGASNVNKMLQ
Sbjct: 4   ENG--RKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63

Query: 63  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122
           ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHLRVR
Sbjct: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVR 123

Query: 123 QTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 171
           QTASFSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDMVVDQA+ DSMW
Sbjct: 124 QTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 170

[Close]

BLAST of Tan0007003 vs. ExPASy TrEMBL
Match: A0A061GE84 (LOB domain-containing protein 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029315 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 146/171 (85.38%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MKENGIIRKQGGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKML 60
           MKE+G  RKQG A+PCAACKLLRRRCA++CVFAPYFPA+EP KFANVHKVFGASNVNKML
Sbjct: 1   MKESG--RKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRV 120
           QELP+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRV
Sbjct: 61  QELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQA-MGDSMW 171
           RQTASFS++G  P SPSNSGSPSS+LMGSQ++PMF++DMVVD A +G+SMW
Sbjct: 121 RQTASFSHHGFGPASPSNSGSPSSKLMGSQAKPMFDVDMVVDHASLGESMW 169

[Close]

BLAST of Tan0007003 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 254.2 bits (648), Expect = 7.3e-68
Identity = 130/172 (75.58%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MKENGIIRKQGGAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKML 60
           MKE+   RKQG A+PCAACKLLRRRCA++CVF+PYFPA+EP KFANVH+VFGASNVNKML
Sbjct: 1   MKESS--RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  QELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRV 120
           QELPIHQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQID LQ QLALAQAEVVHLRV
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 RQTASFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMF-EMDMVVDQAMGDSMW 171
           RQ+ +F  +GL P SPS+SGSPSS+ +  Q ++ MF  MD+V + ++G+SMW
Sbjct: 121 RQSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Tan0007003 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.1e-45
Identity = 81/118 (68.64%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 12  GAAPCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDA 71
           G++PCA+CKLLRRRCA++C+FAPYFP ++PHKFA VHKVFGASNV+KMLQELP+HQR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 72  VSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTASFSNY 130
           V+SLV+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++   +  ++
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122

[Close]

BLAST of Tan0007003 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-41
Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 14  APCAACKLLRRRCAEE-CVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAV 73
           +PCA CKLLRR+C ++ CVFAPYFPA+EP+KFA VHK+FGASNVNKMLQEL  + R DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 74  SSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLR 120
            S+VYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of Tan0007003 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 86/171 (50.29%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 15  PCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSS 74
           PCAACKLLRRRCA+EC F+PYF   EPHKFA+VHKVFGASNV+KML E+P  QR DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 75  LVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR------------Q 134
           LVYEAN R+RDPVYGC+GAIS+LQQQ+ ALQ +L   ++E++  + R            Q
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQ 164

Query: 135 TASFSNYG------LSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGD 168
            A F N G        P  P+    P++    S S  +F      D   G+
Sbjct: 165 VAGFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRDLEYGN 215

[Close]

BLAST of Tan0007003 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 154.5 bits (389), Expect = 7.9e-38
Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 14  APCAACKLLRRRCAEECVFAPYFPAEEPHKFANVHKVFGASNVNKMLQELPIHQRGDAVS 73
           +PCAACK LRR+C   C+FAPYFP EEPHKFANVHK+FGASNV K+L EL  HQR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 74  SLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTASFSNYGLSP 133
           SL YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++ H           YGLS 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH-----------YGLST 129

Query: 134 TSPSNSGSPSSRLMGSQSRP 154
           ++    G+    +   Q  P
Sbjct: 130 SAAGAPGNVVDLVFQPQPLP 138

The following BLAST results are available for this feature:

BLAST of Tan0007003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	1.0e-66	75.58	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	7.2e-44	68.64	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SA51	6.3e-40	71.96	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8L5T5	2.2e-37	50.29	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9FML4	1.1e-36	57.14	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Tan0007003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895183.1	1.9e-81	94.67	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
XP_022927419.1	2.7e-80	91.33	LOB domain-containing protein 4-like [Cucurbita moschata] >XP_023000973.1 LOB do...	[more]
KAG6583812.1	6.0e-80	91.33	LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004145462.1	6.0e-80	94.08	LOB domain-containing protein 4 [Cucumis sativus] >KGN66910.1 hypothetical prote...	[more]
XP_008459081.1	6.6e-79	92.90	PREDICTED: LOB domain-containing protein 4 [Cucumis melo]	[more]

BLAST of Tan0007003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP63	1.3e-80	91.33	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495252...	[more]
A0A6J1EHY2	1.3e-80	91.33	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A0A0LYG0	2.9e-80	94.08	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G713680 PE=3 SV...	[more]
A0A1S3CAK2	3.2e-79	92.90	LOB domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498298 PE=3 SV=...	[more]
A0A061GE84	1.3e-75	85.38	LOB domain-containing protein 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_0293...	[more]

BLAST of Tan0007003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	7.3e-68	75.58	LOB domain-containing protein 4	[more]
AT2G30130.1	5.1e-45	68.64	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G16530.1	4.5e-41	71.96	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G40470.1	1.6e-38	50.29	LOB domain-containing protein 15	[more]
AT5G63090.2	7.9e-38	57.14	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..152
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 6..160
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 6..160
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 2.5E-43 score: 146.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 26.823057

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007003.1	Tan0007003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010087	phloem or xylem histogenesis
molecular_function	GO:0000976	transcription cis-regulatory region binding