Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCCAATTTTTTTTCTTTTTAGCCATTGTTCTTCTTCTTGCCAACATTCATCACCTCCAAGGTTGCAGAACCATGAAACAGGATCGACAAAAGTGGTCGACGGTGCTTCAACAGTCTCTGCAGAGGGCCCCGGTTCCTCCCTCTGCCAGAAATGGTGGCACCAATATTCCGGTGCCGGTCGGGCAAAGGGCCTTTGTCGGAAAAACCACGGCGGCGCCGGCACACACCTACCCAAATCATGTACCGGCTTCTTTTGGTATGCCCTTGAAGACAAACTAA
mRNA sequence
ATGAAGATCCAATTTTTTTTCTTTTTAGCCATTGTTCTTCTTCTTGCCAACATTCATCACCTCCAAGGTTGCAGAACCATGAAACAGGATCGACAAAAGTGGTCGACGGTGCTTCAACAGTCTCTGCAGAGGGCCCCGGTTCCTCCCTCTGCCAGAAATGGTGGCACCAATATTCCGGTGCCGGTCGGGCAAAGGGCCTTTGTCGGAAAAACCACGGCGGCGCCGGCACACACCTACCCAAATCATGTACCGGCTTCTTTTGGTATGCCCTTGAAGACAAACTAA
Coding sequence (CDS)
ATGAAGATCCAATTTTTTTTCTTTTTAGCCATTGTTCTTCTTCTTGCCAACATTCATCACCTCCAAGGTTGCAGAACCATGAAACAGGATCGACAAAAGTGGTCGACGGTGCTTCAACAGTCTCTGCAGAGGGCCCCGGTTCCTCCCTCTGCCAGAAATGGTGGCACCAATATTCCGGTGCCGGTCGGGCAAAGGGCCTTTGTCGGAAAAACCACGGCGGCGCCGGCACACACCTACCCAAATCATGTACCGGCTTCTTTTGGTATGCCCTTGAAGACAAACTAA
Protein sequence
MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPVPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN
Homology
BLAST of Tan0004889 vs. NCBI nr
Match:
KAG6571505.1 (hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 145.6 bits (366), Expect = 2.2e-31
Identity = 70/94 (74.47%), Postives = 80/94 (85.11%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPV 60
MKIQF F LAIV+LLAN H LQ CRTMK DRQKWS +LQQSLQRAPVPPSA+NGGT IPV
Sbjct: 1 MKIQFAFLLAIVVLLANAHQLQSCRTMKDDRQKWSILLQQSLQRAPVPPSAKNGGTTIPV 60
Query: 61 PVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN 95
P+GQRAFVGK+T +PAH+Y + VP FG+ +KTN
Sbjct: 61 PLGQRAFVGKSTPSPAHSYHHQVPVPFGVAMKTN 94
BLAST of Tan0004889 vs. NCBI nr
Match:
KAG6571503.1 (hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIP 60
MKIQF F LAI+++LAN H LQ CRTMK+DRQKWS +LQQSLQRAPVPPSA+NGGT IP
Sbjct: 1 MKIQFAFLLAILVVLANAHQLQSCRTMKEDRQKWSILLLQQSLQRAPVPPSAKNGGTTIP 60
Query: 61 VPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN 95
VP+GQR+FVGK+T +PAH+Y + VP FG+ + TN
Sbjct: 61 VPLGQRSFVGKSTPSPAHSYHHQVPVPFGVAMNTN 95
BLAST of Tan0004889 vs. NCBI nr
Match:
KAG6571501.1 (hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 129.4 bits (324), Expect = 1.6e-26
Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIP 60
MKIQF F LAI+++LAN H LQ CRTMK+DRQKWS +LQQSL+R PVPPSA+NGGT IP
Sbjct: 1 MKIQFAFLLAILVVLANAHQLQSCRTMKEDRQKWSILLLQQSLKRVPVPPSAQNGGTTIP 60
Query: 61 VPVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN 95
+GQRAFVGK+T +PAH+Y + VP FG+ + TN
Sbjct: 61 TQLGQRAFVGKSTPSPAHSYHHQVPVPFGVAMNTN 95
BLAST of Tan0004889 vs. NCBI nr
Match:
KAA0025373.1 (hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa] >TYJ95702.1 hypothetical protein E5676_scaffold63958G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 127.5 bits (319), Expect = 6.1e-26
Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPV 60
MKIQF FF AI++LLAN HHLQ CRTMK D++KWS ++QQSLQRAPVPPS R+G TNIPV
Sbjct: 1 MKIQFTFFFAILVLLANAHHLQSCRTMKDDQRKWSMLIQQSLQRAPVPPSTRDGDTNIPV 60
Query: 61 PVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN 95
P+GQ+AF GK+T PA P+++ G+ LKTN
Sbjct: 61 PLGQQAFAGKSTVPPAFPDPDNLEVPSGVALKTN 94
BLAST of Tan0004889 vs. NCBI nr
Match:
KAG6571504.1 (hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 127.1 bits (318), Expect = 8.0e-26
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS-TVLQQSLQRAPVPPSARNGGTNIP 60
MKIQF F LAI+++LAN H LQ CRTMK+D QKWS +LQQSLQRAPVPP+A+NGGT IP
Sbjct: 1 MKIQFAFLLAILVVLANAHQLQSCRTMKEDPQKWSILLLQQSLQRAPVPPNAKNGGTTIP 60
Query: 61 VPVGQRAFVGKTTAAPAHTYPNHVPASFGM-PLKTN 95
P+GQRAFVGK+T +PAH+Y + VP G+ +KTN
Sbjct: 61 TPLGQRAFVGKSTPSPAHSYHHQVPVPLGVAAMKTN 96
BLAST of Tan0004889 vs. ExPASy TrEMBL
Match:
A0A5D3B777 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63958G00010 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 3.0e-26
Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWSTVLQQSLQRAPVPPSARNGGTNIPV 60
MKIQF FF AI++LLAN HHLQ CRTMK D++KWS ++QQSLQRAPVPPS R+G TNIPV
Sbjct: 1 MKIQFTFFFAILVLLANAHHLQSCRTMKDDQRKWSMLIQQSLQRAPVPPSTRDGDTNIPV 60
Query: 61 PVGQRAFVGKTTAAPAHTYPNHVPASFGMPLKTN 95
P+GQ+AF GK+T PA P+++ G+ LKTN
Sbjct: 61 PLGQQAFAGKSTVPPAFPDPDNLEVPSGVALKTN 94
BLAST of Tan0004889 vs. ExPASy TrEMBL
Match:
A0A0A0LCY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 0
Query: 1 MKIQFFFFLAIVLLLANIHHLQGCRTMKQDRQKWS---TVLQQSLQRAPVPPSARNGGTN 60
MKIQF F LAI++LLAN HHLQ CRT+K D+Q WS +LQQSLQR PVPPSA+NG TN
Sbjct: 1 MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60
Query: 61 IPVPVGQRAFVGKTTAAPAHTY 80
IPVPVGQRAF GKT+AA A Y
Sbjct: 61 IPVPVGQRAFAGKTSAALARNY 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6571505.1 | 2.2e-31 | 74.47 | hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6571503.1 | 1.3e-28 | 69.47 | hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6571501.1 | 1.6e-26 | 66.32 | hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0025373.1 | 6.1e-26 | 64.89 | hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa] >TYJ957... | [more] |
| KAG6571504.1 | 8.0e-26 | 66.67 | hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3B777 | 3.0e-26 | 64.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LCY5 | 1.2e-22 | 71.95 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
